RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 MAP2K2P36507 400 aa14.34□□□□□ -0.11
SLC48A1-209ENST00000552003 ECE1P42892 770 aa14.34□□□□□ -0.11
SLC48A1-209ENST00000552003 NEUROD1Q13562 356 aa14.34□□□□□ -0.11
SLC48A1-209ENST00000552003 TBC1D9BQ66K14 1250 aa14.34□□□□□ -0.11
SLC48A1-209ENST00000552003 PRPF40BQ6NWY9 871 aaKnown RBP14.34□□□□□ -0.11
SLC48A1-209ENST00000552003 ZIC5Q96T25 663 aa14.34□□□□□ -0.11
SLC48A1-209ENST00000552003 TLL2Q9Y6L7 1015 aa14.34□□□□□ -0.11
SLC48A1-209ENST00000552003 ST20-MTHFSA0A0A6YYL1 179 aa14.33□□□□□ -0.12
SLC48A1-209ENST00000552003 PNMA8AQ86V59 439 aaPredicted RBP14.33□□□□□ -0.12
SLC48A1-209ENST00000552003 ZNF277Q9NRM2 450 aaPredicted RBP14.33□□□□□ -0.12
SLC48A1-209ENST00000552003 HSP90AB1P08238 724 aaKnown RBP14.32□□□□□ -0.12
SLC48A1-209ENST00000552003 ZNF530Q6P9A1 599 aaPredicted RBP14.32□□□□□ -0.12
SLC48A1-209ENST00000552003 POLKQ9UBT6 870 aa14.32□□□□□ -0.12
SLC48A1-209ENST00000552003 MKI67P46013 3256 aaKnown RBP14.32□□□□□ -0.12
SLC48A1-209ENST00000552003 COL4A5P29400 1685 aa14.31□□□□□ -0.12
SLC48A1-209ENST00000552003 FZD9O00144 591 aa14.31□□□□□ -0.12
SLC48A1-209ENST00000552003 SRGNP10124 158 aa14.31□□□□□ -0.12
SLC48A1-209ENST00000552003 PDE6BP35913 854 aa14.31□□□□□ -0.12
SLC48A1-209ENST00000552003 MTHFSP49914 203 aa14.31□□□□□ -0.12
SLC48A1-209ENST00000552003 SCN11AQ9UI33 1791 aa14.3□□□□□ -0.12
SLC48A1-209ENST00000552003 CIAPIN1Q6FI81 312 aa14.3□□□□□ -0.12
SLC48A1-209ENST00000552003 EPS15P42566 896 aa14.29□□□□□ -0.12
SLC48A1-209ENST00000552003 SLC39A6Q13433 755 aa14.29□□□□□ -0.12
SLC48A1-209ENST00000552003 STYK1Q6J9G0 422 aa14.29□□□□□ -0.12
SLC48A1-209ENST00000552003 SAPCD2Q86UD0 394 aa14.29□□□□□ -0.12
SLC48A1-209ENST00000552003 CNKSR1Q969H4 720 aa14.29□□□□□ -0.12
SLC48A1-209ENST00000552003 SZT2Q5T011 3432 aa14.28□□□□□ -0.12
SLC48A1-209ENST00000552003 CA12O43570 354 aa14.28□□□□□ -0.12
SLC48A1-209ENST00000552003 BRPF1P55201 1214 aaPredicted RBP14.28□□□□□ -0.12
SLC48A1-209ENST00000552003 FKBP4Q02790 459 aaKnown RBP eCLIP14.28□□□□□ -0.12
SLC48A1-209ENST00000552003 PLEKHO1Q53GL0 409 aaPredicted RBP14.28□□□□□ -0.12
SLC48A1-209ENST00000552003 PDZRN3Q9UPQ7 1066 aa14.28□□□□□ -0.12
SLC48A1-209ENST00000552003 CANXP27824 592 aaKnown RBP14.27□□□□□ -0.13
SLC48A1-209ENST00000552003 SCNN1DP51172 638 aa14.27□□□□□ -0.13
SLC48A1-209ENST00000552003 EIF5P55010 431 aaKnown RBP14.27□□□□□ -0.13
SLC48A1-209ENST00000552003 AEBP1Q8IUX7 1158 aa14.27□□□□□ -0.13
SLC48A1-209ENST00000552003 GPC2Q8N158 579 aa14.27□□□□□ -0.13
SLC48A1-209ENST00000552003 SCN7AQ01118 1682 aa14.26□□□□□ -0.13
SLC48A1-209ENST00000552003 SNED1Q8TER0 1413 aa14.26□□□□□ -0.13
SLC48A1-209ENST00000552003 CCDC93Q567U6 631 aa14.26□□□□□ -0.13
SLC48A1-209ENST00000552003 MASTLQ96GX5 879 aa14.26□□□□□ -0.13
SLC48A1-209ENST00000552003 HABP4Q5JVS0 413 aaKnown RBP14.25□□□□□ -0.13
SLC48A1-209ENST00000552003 SOGA3Q5TF21 947 aa14.25□□□□□ -0.13
SLC48A1-209ENST00000552003 LGR6Q9HBX8 967 aa14.25□□□□□ -0.13
SLC48A1-209ENST00000552003 IARSP41252 1262 aaKnown RBP14.24□□□□□ -0.13
SLC48A1-209ENST00000552003 AMOTQ4VCS5 1084 aa14.24□□□□□ -0.13
SLC48A1-209ENST00000552003 TBC1D2BQ9UPU7 963 aa14.24□□□□□ -0.13
SLC48A1-209ENST00000552003 BCORQ6W2J9 1755 aa14.24□□□□□ -0.13
SLC48A1-209ENST00000552003 SLC51AQ86UW1 340 aa14.23□□□□□ -0.13
SLC48A1-209ENST00000552003 SYNE4Q8N205 404 aa14.23□□□□□ -0.13
SLC48A1-209ENST00000552003 SLC52A2Q9HAB3 445 aa14.23□□□□□ -0.13
SLC48A1-209ENST00000552003 CELF2O95319 508 aaKnown RBP14.22□□□□□ -0.13
SLC48A1-209ENST00000552003 CNBD1Q8NA66 436 aa14.22□□□□□ -0.13
SLC48A1-209ENST00000552003 HHIPL1Q96JK4 782 aa14.22□□□□□ -0.13
SLC48A1-209ENST00000552003 RNF216Q9NWF9 866 aaPredicted RBP14.22□□□□□ -0.13
SLC48A1-209ENST00000552003 GJA3Q9Y6H8 435 aa14.22□□□□□ -0.13
SLC48A1-209ENST00000552003 MRC1P22897 1456 aa14.21□□□□□ -0.13
SLC48A1-209ENST00000552003 C1orf141Q5JVX7 400 aa14.21□□□□□ -0.13
SLC48A1-209ENST00000552003 UBR2Q8IWV8 1755 aa14.21□□□□□ -0.13
SLC48A1-209ENST00000552003 KLRG2A4D1S0 409 aaPredicted RBP14.2□□□□□ -0.14
SLC48A1-209ENST00000552003 DLK2Q6UY11 383 aa14.2□□□□□ -0.14
SLC48A1-209ENST00000552003 GLIS2Q9BZE0 524 aaPredicted RBP14.2□□□□□ -0.14
SLC48A1-209ENST00000552003 CAMTA2O94983 1202 aa14.19□□□□□ -0.14
SLC48A1-209ENST00000552003 TNNT2P45379 298 aaPredicted RBP14.19□□□□□ -0.14
SLC48A1-209ENST00000552003 FXR1P51114 621 aaKnown RBP eCLIP14.19□□□□□ -0.14
SLC48A1-209ENST00000552003 USP50Q70EL3 339 aaPredicted RBP14.19□□□□□ -0.14
SLC48A1-209ENST00000552003 FAM155AB1AL88 458 aaPredicted RBP14.18□□□□□ -0.14
SLC48A1-209ENST00000552003 RTKN2Q8IZC4 609 aa14.18□□□□□ -0.14
SLC48A1-209ENST00000552003 VSIG10Q8N0Z9 540 aa14.18□□□□□ -0.14
SLC48A1-209ENST00000552003 HPS5Q9UPZ3 1129 aa14.18□□□□□ -0.14
SLC48A1-209ENST00000552003 CUL9Q8IWT3 2517 aa14.17□□□□□ -0.14
SLC48A1-209ENST00000552003 A0A0C4DFX4 3053 aa14.17□□□□□ -0.14
SLC48A1-209ENST00000552003 NPR1P16066 1061 aa14.17□□□□□ -0.14
SLC48A1-209ENST00000552003 LMOD1P29536 600 aaPredicted RBP14.17□□□□□ -0.14
SLC48A1-209ENST00000552003 SETDB2Q96T68 719 aa14.17□□□□□ -0.14
SLC48A1-209ENST00000552003 BRCA2P51587 3418 aa14.16□□□□□ -0.14
SLC48A1-209ENST00000552003 A0A087WZG4 1122 aa14.16□□□□□ -0.14
SLC48A1-209ENST00000552003 RNMTO43148 476 aaKnown RBP14.16□□□□□ -0.14
SLC48A1-209ENST00000552003 ST5P78524 1137 aa14.16□□□□□ -0.14
SLC48A1-209ENST00000552003 NOGQ13253 232 aa14.16□□□□□ -0.14
SLC48A1-209ENST00000552003 GCC1Q96CN9 775 aa14.16□□□□□ -0.14
SLC48A1-209ENST00000552003 RNF186Q9NXI6 227 aa14.16□□□□□ -0.14
SLC48A1-209ENST00000552003 PGAP2Q9UHJ9 254 aa14.16□□□□□ -0.14
SLC48A1-209ENST00000552003 TRPA1O75762 1119 aa14.15□□□□□ -0.14
SLC48A1-209ENST00000552003 HIRAP54198 1017 aaPredicted RBP14.15□□□□□ -0.14
SLC48A1-209ENST00000552003 EIF6P56537 245 aaKnown RBP14.15□□□□□ -0.14
SLC48A1-209ENST00000552003 CTU1Q7Z7A3 348 aaKnown RBP14.15□□□□□ -0.14
SLC48A1-209ENST00000552003 PSMD1Q99460 953 aa14.15□□□□□ -0.14
SLC48A1-209ENST00000552003 ZNF408Q9H9D4 720 aa14.15□□□□□ -0.14
SLC48A1-209ENST00000552003 AKAP4Q5JQC9 854 aa14.14□□□□□ -0.15
SLC48A1-209ENST00000552003 SULT6B1Q6IMI4 303 aa14.14□□□□□ -0.15
SLC48A1-209ENST00000552003 NBPF15Q8N660 670 aa14.14□□□□□ -0.15
SLC48A1-209ENST00000552003 JDP2Q8WYK2 163 aa14.14□□□□□ -0.15
SLC48A1-209ENST00000552003 SAGE1Q9NXZ1 904 aa14.14□□□□□ -0.15
SLC48A1-209ENST00000552003 GPRC5DQ9NZD1 345 aa14.14□□□□□ -0.15
SLC48A1-209ENST00000552003 ZNF330Q9Y3S2 320 aaPredicted RBP14.14□□□□□ -0.15
SLC48A1-209ENST00000552003 HTTP42858 3142 aa14.14□□□□□ -0.15
SLC48A1-209ENST00000552003 TRIOBPQ9H2D6 2365 aa14.14□□□□□ -0.15
SLC48A1-209ENST00000552003 AKAP11Q9UKA4 1901 aa14.13□□□□□ -0.15
SLC48A1-209ENST00000552003 A1BGP04217 495 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms