RNA–Protein interactions for RNA: ENST00000551989.1

CCNT1-204, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 726 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-204ENST00000551989 TBX22Q9Y458 520 aa6.57□□□□□ -1.36
CCNT1-204ENST00000551989 NCAPD2Q15021 1401 aa6.57□□□□□ -1.36
CCNT1-204ENST00000551989 NWD1Q149M9 1564 aa6.57□□□□□ -1.36
CCNT1-204ENST00000551989 PLEKHG2Q9H7P9 1386 aa6.57□□□□□ -1.36
CCNT1-204ENST00000551989 ADAMTS7Q9UKP4 1686 aa6.56□□□□□ -1.36
CCNT1-204ENST00000551989 RAB11FIP3O75154 756 aa6.56□□□□□ -1.36
CCNT1-204ENST00000551989 TPM2P07951 284 aa6.56□□□□□ -1.36
CCNT1-204ENST00000551989 MCM5P33992 734 aa6.56□□□□□ -1.36
CCNT1-204ENST00000551989 RRS1Q15050 365 aaKnown RBP6.56□□□□□ -1.36
CCNT1-204ENST00000551989 TXNDC2Q86VQ3 553 aa6.56□□□□□ -1.36
CCNT1-204ENST00000551989 SYAP1Q96A49 352 aaPredicted RBP6.56□□□□□ -1.36
CCNT1-204ENST00000551989 THUMPD2Q9BTF0 503 aaKnown RBP6.56□□□□□ -1.36
CCNT1-204ENST00000551989 C1orf115Q9H7X2 142 aa6.56□□□□□ -1.36
CCNT1-204ENST00000551989 EID1Q9Y6B2 187 aa6.56□□□□□ -1.36
CCNT1-204ENST00000551989 DDX49Q9Y6V7 483 aaKnown RBP6.56□□□□□ -1.36
CCNT1-204ENST00000551989 TCHHQ07283 1943 aa6.56□□□□□ -1.36
CCNT1-204ENST00000551989 CEP170BQ9Y4F5 1589 aaPredicted RBP6.56□□□□□ -1.36
CCNT1-204ENST00000551989 MAP3K5Q99683 1374 aa6.56□□□□□ -1.36
CCNT1-204ENST00000551989 ABCC6O95255 1503 aa6.55□□□□□ -1.36
CCNT1-204ENST00000551989 KIF1AQ12756 1690 aa6.55□□□□□ -1.36
CCNT1-204ENST00000551989 SALL3Q9BXA9 1300 aa6.55□□□□□ -1.36
CCNT1-204ENST00000551989 PHF14O94880 888 aa6.55□□□□□ -1.36
CCNT1-204ENST00000551989 SDSP20132 328 aa6.55□□□□□ -1.36
CCNT1-204ENST00000551989 NASPP49321 788 aaPredicted RBP6.55□□□□□ -1.36
CCNT1-204ENST00000551989 PDE1AP54750 535 aa6.55□□□□□ -1.36
CCNT1-204ENST00000551989 HSP90AB4PQ58FF6 505 aa6.55□□□□□ -1.36
CCNT1-204ENST00000551989 PLPP6Q8IY26 295 aa6.55□□□□□ -1.36
CCNT1-204ENST00000551989 HS6ST3Q8IZP7 471 aa6.55□□□□□ -1.36
CCNT1-204ENST00000551989 SPRYD3Q8NCJ5 442 aa6.55□□□□□ -1.36
CCNT1-204ENST00000551989 LRRCC1Q9C099 1032 aa6.55□□□□□ -1.36
CCNT1-204ENST00000551989 DNAJC5Q9H3Z4 198 aa6.55□□□□□ -1.36
CCNT1-204ENST00000551989 RRAGDQ9NQL2 400 aaPredicted RBP6.55□□□□□ -1.36
CCNT1-204ENST00000551989 HCSTQ9UBK5 93 aa6.55□□□□□ -1.36
CCNT1-204ENST00000551989 STAP2Q9UGK3 403 aa6.55□□□□□ -1.36
CCNT1-204ENST00000551989 TSPYL4Q9UJ04 414 aa6.55□□□□□ -1.36
CCNT1-204ENST00000551989 FAM83GA6ND36 823 aa6.54□□□□□ -1.36
CCNT1-204ENST00000551989 ELL2O00472 640 aaPredicted RBP6.54□□□□□ -1.36
CCNT1-204ENST00000551989 HMGB1P09429 215 aaKnown RBP6.54□□□□□ -1.36
CCNT1-204ENST00000551989 SSFA2P28290 1259 aa6.54□□□□□ -1.36
CCNT1-204ENST00000551989 ATP8B2P98198 1209 aa6.54□□□□□ -1.36
CCNT1-204ENST00000551989 CUL4AQ13619 759 aa6.54□□□□□ -1.36
CCNT1-204ENST00000551989 GLIPR1L2Q4G1C9 344 aa6.54□□□□□ -1.36
CCNT1-204ENST00000551989 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.54□□□□□ -1.36
CCNT1-204ENST00000551989 ZSCAN30Q86W11 494 aa6.54□□□□□ -1.36
CCNT1-204ENST00000551989 MAP3K19Q56UN5 1328 aa6.53□□□□□ -1.36
CCNT1-204ENST00000551989 GNAT3A8MTJ3 354 aa6.53□□□□□ -1.36
CCNT1-204ENST00000551989 CD2BP2O95400 341 aaKnown RBP6.53□□□□□ -1.36
CCNT1-204ENST00000551989 MX1P20591 662 aa6.53□□□□□ -1.36
CCNT1-204ENST00000551989 MSNP26038 577 aaKnown RBP6.53□□□□□ -1.36
CCNT1-204ENST00000551989 DSG2Q14126 1118 aa6.53□□□□□ -1.36
CCNT1-204ENST00000551989 DMRTA1Q5VZB9 504 aa6.53□□□□□ -1.36
CCNT1-204ENST00000551989 FAM184AQ8NB25 1140 aa6.53□□□□□ -1.36
CCNT1-204ENST00000551989 MEIS3Q99687 375 aa6.53□□□□□ -1.36
CCNT1-204ENST00000551989 ESYT1Q9BSJ8 1104 aa6.53□□□□□ -1.36
CCNT1-204ENST00000551989 GZF1Q9H116 711 aaPredicted RBP6.53□□□□□ -1.36
CCNT1-204ENST00000551989 ANO8Q9HCE9 1232 aaPredicted RBP6.53□□□□□ -1.36
CCNT1-204ENST00000551989 LMBRD1Q9NUN5 540 aa6.53□□□□□ -1.36
CCNT1-204ENST00000551989 NFAT5O94916 1531 aa6.53□□□□□ -1.36
CCNT1-204ENST00000551989 MYH15Q9Y2K3 1946 aa6.52□□□□□ -1.37
CCNT1-204ENST00000551989 SCN11AQ9UI33 1791 aa6.52□□□□□ -1.37
CCNT1-204ENST00000551989 RRP9O43818 475 aaKnown RBP6.52□□□□□ -1.37
CCNT1-204ENST00000551989 LETM1O95202 739 aaPredicted RBP6.52□□□□□ -1.37
CCNT1-204ENST00000551989 AMPHP49418 695 aa6.52□□□□□ -1.37
CCNT1-204ENST00000551989 PSEN2P49810 448 aa6.52□□□□□ -1.37
CCNT1-204ENST00000551989 FLIIQ13045 1269 aa6.52□□□□□ -1.37
CCNT1-204ENST00000551989 CSPP1Q1MSJ5 1256 aa6.52□□□□□ -1.37
CCNT1-204ENST00000551989 CYB5RLQ6IPT4 315 aa6.52□□□□□ -1.37
CCNT1-204ENST00000551989 MCM10Q7L590 875 aa6.52□□□□□ -1.37
CCNT1-204ENST00000551989 AEBP1Q8IUX7 1158 aa6.52□□□□□ -1.37
CCNT1-204ENST00000551989 PDLIM2Q96JY6 352 aa6.52□□□□□ -1.37
CCNT1-204ENST00000551989 PANK2Q9BZ23 570 aa6.52□□□□□ -1.37
CCNT1-204ENST00000551989 ATP6V1DQ9Y5K8 247 aa6.52□□□□□ -1.37
CCNT1-204ENST00000551989 CEMIPQ8WUJ3 1361 aa6.52□□□□□ -1.37
CCNT1-204ENST00000551989 LAMB4A4D0S4 1761 aa6.52□□□□□ -1.37
CCNT1-204ENST00000551989 RGPD2P0DJD1 1756 aa6.52□□□□□ -1.37
CCNT1-204ENST00000551989 TTC41PQ6P2S7 1318 aa6.51□□□□□ -1.37
CCNT1-204ENST00000551989 WDR33Q9C0J8 1336 aaKnown RBP6.51□□□□□ -1.37
CCNT1-204ENST00000551989 USP42Q9H9J4 1324 aaKnown RBP6.51□□□□□ -1.37
CCNT1-204ENST00000551989 SETD1BQ9UPS6 1966 aaKnown RBP6.51□□□□□ -1.37
CCNT1-204ENST00000551989 SLIT3O75094 1523 aa6.51□□□□□ -1.37
CCNT1-204ENST00000551989 BRD1O95696 1058 aa6.51□□□□□ -1.37
CCNT1-204ENST00000551989 NCLP19338 710 aaKnown RBP6.51□□□□□ -1.37
CCNT1-204ENST00000551989 DCTN1Q14203 1278 aa6.51□□□□□ -1.37
CCNT1-204ENST00000551989 TAF7Q15545 349 aaPredicted RBP6.51□□□□□ -1.37
CCNT1-204ENST00000551989 MTHFSDQ2M296 383 aaKnown RBP6.51□□□□□ -1.37
CCNT1-204ENST00000551989 UVSSAQ2YD98 709 aa6.51□□□□□ -1.37
CCNT1-204ENST00000551989 HSP90AB2PQ58FF8 381 aa6.51□□□□□ -1.37
CCNT1-204ENST00000551989 MCTP1Q6DN14 999 aa6.51□□□□□ -1.37
CCNT1-204ENST00000551989 LRSAM1Q6UWE0 723 aa6.51□□□□□ -1.37
CCNT1-204ENST00000551989 THEMISQ8N1K5 641 aaPredicted RBP6.51□□□□□ -1.37
CCNT1-204ENST00000551989 TMEM87AQ8NBN3 555 aa6.51□□□□□ -1.37
CCNT1-204ENST00000551989 SSH3Q8TE77 659 aa6.51□□□□□ -1.37
CCNT1-204ENST00000551989 RUFY2Q8WXA3 655 aa6.51□□□□□ -1.37
CCNT1-204ENST00000551989 PLA2G2EQ9NZK7 142 aa6.51□□□□□ -1.37
CCNT1-204ENST00000551989 RAD50Q92878 1312 aa6.5□□□□□ -1.37
CCNT1-204ENST00000551989 PARP4Q9UKK3 1724 aaKnown RBP6.5□□□□□ -1.37
CCNT1-204ENST00000551989 AFDNP55196 1824 aaKnown RBP6.5□□□□□ -1.37
CCNT1-204ENST00000551989 HIP1O00291 1037 aa6.5□□□□□ -1.37
CCNT1-204ENST00000551989 ZNF500O60304 480 aaPredicted RBP6.5□□□□□ -1.37
CCNT1-204ENST00000551989 UBTFL1P0CB47 393 aaPredicted RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms