RNA–Protein interactions for RNA: ENST00000551436.1

KRT4-203, Transcript of keratin 4, humanhuman

TSL 2

Gene KRT4, Length 552 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-203ENST00000551436 FAM196AQ6ZSG2 479 aa12.16□□□□□ -0.46
KRT4-203ENST00000551436 DLG5Q8TDM6 1919 aa12.15□□□□□ -0.46
KRT4-203ENST00000551436 BCL9O00512 1426 aa12.15□□□□□ -0.46
KRT4-203ENST00000551436 PPP1R37O75864 691 aa12.15□□□□□ -0.46
KRT4-203ENST00000551436 PTCD2Q8WV60 388 aaKnown RBP12.15□□□□□ -0.46
KRT4-203ENST00000551436 CHMP4AQ9BY43 222 aa12.15□□□□□ -0.46
KRT4-203ENST00000551436 ADAMTS7Q9UKP4 1686 aa12.14□□□□□ -0.47
KRT4-203ENST00000551436 CT47B1P0C2W7 299 aaPredicted RBP12.14□□□□□ -0.47
KRT4-203ENST00000551436 EXOSC9Q06265 439 aaKnown RBP12.14□□□□□ -0.47
KRT4-203ENST00000551436 ZNF790Q6PG37 636 aa12.14□□□□□ -0.47
KRT4-203ENST00000551436 PIGBQ92521 554 aa12.14□□□□□ -0.47
KRT4-203ENST00000551436 ACSBG1Q96GR2 724 aa12.14□□□□□ -0.47
KRT4-203ENST00000551436 SHANK3Q9BYB0 1731 aa12.14□□□□□ -0.47
KRT4-203ENST00000551436 MRC1P22897 1456 aa12.14□□□□□ -0.47
KRT4-203ENST00000551436 FAM182BQ5T319 152 aa12.13□□□□□ -0.47
KRT4-203ENST00000551436 SOS1Q07889 1333 aaPredicted RBP12.12□□□□□ -0.47
KRT4-203ENST00000551436 RGS12O14924 1447 aa12.12□□□□□ -0.47
KRT4-203ENST00000551436 EIF4A1P60842 406 aaKnown RBP12.12□□□□□ -0.47
KRT4-203ENST00000551436 SLC39A6Q13433 755 aa12.12□□□□□ -0.47
KRT4-203ENST00000551436 TWISTNBQ3B726 338 aaPredicted RBP12.12□□□□□ -0.47
KRT4-203ENST00000551436 SMARCC1Q92922 1105 aaPredicted RBP12.12□□□□□ -0.47
KRT4-203ENST00000551436 ZNF428Q96B54 188 aa12.12□□□□□ -0.47
KRT4-203ENST00000551436 FMNL2Q96PY5 1086 aa12.12□□□□□ -0.47
KRT4-203ENST00000551436 SCN11AQ9UI33 1791 aa12.11□□□□□ -0.47
KRT4-203ENST00000551436 KCNQ2O43526 872 aa12.11□□□□□ -0.47
KRT4-203ENST00000551436 C8orf58Q8NAV2 365 aa12.11□□□□□ -0.47
KRT4-203ENST00000551436 ATG3Q9NT62 314 aa12.11□□□□□ -0.47
KRT4-203ENST00000551436 ELL2O00472 640 aaPredicted RBP12.1□□□□□ -0.47
KRT4-203ENST00000551436 KCNQ3O43525 872 aa12.1□□□□□ -0.47
KRT4-203ENST00000551436 HOXB7P09629 217 aa12.1□□□□□ -0.47
KRT4-203ENST00000551436 RCAN3Q9UKA8 241 aa12.1□□□□□ -0.47
KRT4-203ENST00000551436 ASAP1Q9ULH1 1129 aa12.1□□□□□ -0.47
KRT4-203ENST00000551436 PTCD1O75127 700 aaKnown RBP12.09□□□□□ -0.47
KRT4-203ENST00000551436 VAMP4O75379 141 aa12.09□□□□□ -0.47
KRT4-203ENST00000551436 SNRPA1P09661 255 aaKnown RBP12.09□□□□□ -0.47
KRT4-203ENST00000551436 ZNF496Q96IT1 587 aaPredicted RBP12.09□□□□□ -0.47
KRT4-203ENST00000551436 TEX13AQ9BXU3 409 aaPredicted RBP12.09□□□□□ -0.47
KRT4-203ENST00000551436 GIGYF1O75420 1035 aaPredicted RBP12.08□□□□□ -0.48
KRT4-203ENST00000551436 PPP4R3BQ5MIZ7 849 aa12.08□□□□□ -0.48
KRT4-203ENST00000551436 VSIG10Q8N0Z9 540 aa12.08□□□□□ -0.48
KRT4-203ENST00000551436 TSPYL6Q8N831 410 aa12.08□□□□□ -0.48
KRT4-203ENST00000551436 TRIM37O94972 964 aa12.07□□□□□ -0.48
KRT4-203ENST00000551436 HMGB2P26583 209 aaKnown RBP12.07□□□□□ -0.48
KRT4-203ENST00000551436 KRT24Q2M2I5 525 aa12.07□□□□□ -0.48
KRT4-203ENST00000551436 ALDH1L2Q3SY69 923 aa12.07□□□□□ -0.48
KRT4-203ENST00000551436 HDGFL1Q5TGJ6 251 aa12.07□□□□□ -0.48
KRT4-203ENST00000551436 CCDC30Q5VVM6 783 aa12.07□□□□□ -0.48
KRT4-203ENST00000551436 STK31Q9BXU1 1019 aa12.07□□□□□ -0.48
KRT4-203ENST00000551436 HEG1Q9ULI3 1381 aa12.06□□□□□ -0.48
KRT4-203ENST00000551436 DOT1LQ8TEK3 1739 aa12.06□□□□□ -0.48
KRT4-203ENST00000551436 TOGARAM1Q9Y4F4 1720 aa12.06□□□□□ -0.48
KRT4-203ENST00000551436 RARSP54136 660 aaKnown RBP12.06□□□□□ -0.48
KRT4-203ENST00000551436 PTPN5P54829 565 aa12.06□□□□□ -0.48
KRT4-203ENST00000551436 KCNK17Q96T54 332 aa12.06□□□□□ -0.48
KRT4-203ENST00000551436 PALLDQ8WX93 1383 aa12.05□□□□□ -0.48
KRT4-203ENST00000551436 SIPA1L3O60292 1781 aaPredicted RBP12.05□□□□□ -0.48
KRT4-203ENST00000551436 LOC102724428A0A0B4J2F2 783 aa12.05□□□□□ -0.48
KRT4-203ENST00000551436 STARD3NLO95772 234 aa12.05□□□□□ -0.48
KRT4-203ENST00000551436 EIF2S2P20042 333 aaKnown RBP12.05□□□□□ -0.48
KRT4-203ENST00000551436 SIK1P57059 783 aa12.05□□□□□ -0.48
KRT4-203ENST00000551436 PLPP6Q8IY26 295 aa12.05□□□□□ -0.48
KRT4-203ENST00000551436 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.05□□□□□ -0.48
KRT4-203ENST00000551436 SMC4Q9NTJ3 1288 aa12.05□□□□□ -0.48
KRT4-203ENST00000551436 ATP6V1AP38606 617 aa12.04□□□□□ -0.48
KRT4-203ENST00000551436 FOXK1P85037 733 aa12.04□□□□□ -0.48
KRT4-203ENST00000551436 PTF1AQ7RTS3 328 aa12.04□□□□□ -0.48
KRT4-203ENST00000551436 DBF4Q9UBU7 674 aaPredicted RBP12.04□□□□□ -0.48
KRT4-203ENST00000551436 VPS9D1Q9Y2B5 631 aa12.04□□□□□ -0.48
KRT4-203ENST00000551436 KDM3BQ7LBC6 1761 aa12.04□□□□□ -0.48
KRT4-203ENST00000551436 BRWD3Q6RI45 1802 aa12.04□□□□□ -0.48
KRT4-203ENST00000551436 NHSQ6T4R5 1651 aa12.03□□□□□ -0.48
KRT4-203ENST00000551436 ECM2O94769 699 aaPredicted RBP12.03□□□□□ -0.48
KRT4-203ENST00000551436 APBA3O96018 575 aa12.03□□□□□ -0.48
KRT4-203ENST00000551436 CANXP27824 592 aaKnown RBP12.03□□□□□ -0.48
KRT4-203ENST00000551436 SF3B2Q13435 895 aaKnown RBP12.03□□□□□ -0.48
KRT4-203ENST00000551436 SSH1Q8WYL5 1049 aa12.03□□□□□ -0.48
KRT4-203ENST00000551436 NECTIN2Q92692 538 aa12.03□□□□□ -0.48
KRT4-203ENST00000551436 USP16Q9Y5T5 823 aa12.03□□□□□ -0.48
KRT4-203ENST00000551436 ITGB4P16144 1822 aa12.02□□□□□ -0.48
KRT4-203ENST00000551436 VIRMAQ69YN4 1812 aaKnown RBP12.02□□□□□ -0.48
KRT4-203ENST00000551436 KCPQ6ZWJ8 1503 aa12.02□□□□□ -0.48
KRT4-203ENST00000551436 PRAMEF22A3QJZ6 481 aa12.02□□□□□ -0.49
KRT4-203ENST00000551436 IPO8O15397 1037 aaKnown RBP12.02□□□□□ -0.49
KRT4-203ENST00000551436 BCAR3O75815 825 aa12.02□□□□□ -0.49
KRT4-203ENST00000551436 BCL2L13Q9BXK5 485 aa12.02□□□□□ -0.49
KRT4-203ENST00000551436 CCNL1Q9UK58 526 aaPredicted RBP12.02□□□□□ -0.49
KRT4-203ENST00000551436 SUPT16HQ9Y5B9 1047 aaKnown RBP12.02□□□□□ -0.49
KRT4-203ENST00000551436 ERBB4Q15303 1308 aa12.02□□□□□ -0.49
KRT4-203ENST00000551436 KIF16BQ96L93 1317 aa12.02□□□□□ -0.49
KRT4-203ENST00000551436 PAPPAQ13219 1627 aa12.01□□□□□ -0.49
KRT4-203ENST00000551436 TCERG1O14776 1098 aaKnown RBP12.01□□□□□ -0.49
KRT4-203ENST00000551436 PLSCR1O15162 318 aa12.01□□□□□ -0.49
KRT4-203ENST00000551436 RGL2O15211 777 aa12.01□□□□□ -0.49
KRT4-203ENST00000551436 BRPF1P55201 1214 aaPredicted RBP12.01□□□□□ -0.49
KRT4-203ENST00000551436 SLC27A3Q5K4L6 730 aa12.01□□□□□ -0.49
KRT4-203ENST00000551436 NPM2Q86SE8 214 aaKnown RBP12.01□□□□□ -0.49
KRT4-203ENST00000551436 CCDC125Q86Z20 511 aa12.01□□□□□ -0.49
KRT4-203ENST00000551436 DNAJC10Q8IXB1 793 aa12.01□□□□□ -0.49
KRT4-203ENST00000551436 FRAT1Q92837 279 aaPredicted RBP12.01□□□□□ -0.49
KRT4-203ENST00000551436 DDX21Q9NR30 783 aaKnown RBP eCLIP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms