RNA–Protein interactions for RNA: ENST00000551305.5

TMEM106C-216, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best)

Gene TMEM106C, Length 1,356 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-216ENST00000551305 SRGNP10124 158 aa19.83■□□□□ 0.76
TMEM106C-216ENST00000551305 ST5P78524 1137 aa19.83■□□□□ 0.76
TMEM106C-216ENST00000551305 U2AF1Q01081 240 aaKnown RBP eCLIP19.83■□□□□ 0.76
TMEM106C-216ENST00000551305 CNKSR1Q969H4 720 aa19.83■□□□□ 0.76
TMEM106C-216ENST00000551305 STYK1Q6J9G0 422 aa19.82■□□□□ 0.76
TMEM106C-216ENST00000551305 PRPF40BQ6NWY9 871 aaKnown RBP19.82■□□□□ 0.76
TMEM106C-216ENST00000551305 TAOK3Q9H2K8 898 aa19.82■□□□□ 0.76
TMEM106C-216ENST00000551305 NUDCQ9Y266 331 aa19.82■□□□□ 0.76
TMEM106C-216ENST00000551305 PPP2R1AP30153 589 aa19.81■□□□□ 0.76
TMEM106C-216ENST00000551305 MASTLQ96GX5 879 aa19.81■□□□□ 0.76
TMEM106C-216ENST00000551305 SLX4Q8IY92 1834 aa19.8■□□□□ 0.76
TMEM106C-216ENST00000551305 FER1L6Q2WGJ9 1857 aa19.8■□□□□ 0.76
TMEM106C-216ENST00000551305 DDNO94850 711 aaPredicted RBP19.8■□□□□ 0.76
TMEM106C-216ENST00000551305 SNRPA1P09661 255 aaKnown RBP19.8■□□□□ 0.76
TMEM106C-216ENST00000551305 NBPF5PQ86XG9 351 aaPredicted RBP19.8■□□□□ 0.76
TMEM106C-216ENST00000551305 RTF1Q92541 710 aaKnown RBP19.8■□□□□ 0.76
TMEM106C-216ENST00000551305 NBPF26B4DH59 902 aa19.79■□□□□ 0.76
TMEM106C-216ENST00000551305 NBPF10Q6P3W6 841 aaKnown RBP19.79■□□□□ 0.76
TMEM106C-216ENST00000551305 NBPF15Q8N660 670 aa19.79■□□□□ 0.76
TMEM106C-216ENST00000551305 LTBP3Q9NS15 1303 aa19.78■□□□□ 0.76
TMEM106C-216ENST00000551305 CLEC4GQ6UXB4 293 aa19.78■□□□□ 0.76
TMEM106C-216ENST00000551305 MIS18AQ9NYP9 233 aa19.78■□□□□ 0.76
TMEM106C-216ENST00000551305 BCORQ6W2J9 1755 aa19.78■□□□□ 0.76
TMEM106C-216ENST00000551305 FAM177BA6PVY3 158 aa19.77■□□□□ 0.76
TMEM106C-216ENST00000551305 POTEIP0CG38 1075 aa19.77■□□□□ 0.76
TMEM106C-216ENST00000551305 POTEJP0CG39 1038 aa19.77■□□□□ 0.76
TMEM106C-216ENST00000551305 C7orf43Q8WVR3 580 aa19.77■□□□□ 0.76
TMEM106C-216ENST00000551305 CACNA1SQ13698 1873 aa19.76■□□□□ 0.75
TMEM106C-216ENST00000551305 NIP7Q9Y221 180 aaKnown RBP eCLIP19.76■□□□□ 0.75
TMEM106C-216ENST00000551305 DICER1Q9UPY3 1922 aaKnown RBP19.76■□□□□ 0.75
TMEM106C-216ENST00000551305 HLFQ16534 295 aa19.75■□□□□ 0.75
TMEM106C-216ENST00000551305 OLFM4Q6UX06 510 aa19.75■□□□□ 0.75
TMEM106C-216ENST00000551305 ZNF652Q9Y2D9 606 aa19.75■□□□□ 0.75
TMEM106C-216ENST00000551305 HSPA1AP0DMV8 641 aaKnown RBP19.74■□□□□ 0.75
TMEM106C-216ENST00000551305 HSPA1BP0DMV9 641 aaKnown RBP19.74■□□□□ 0.75
TMEM106C-216ENST00000551305 NPR1P16066 1061 aa19.74■□□□□ 0.75
TMEM106C-216ENST00000551305 SOGA3Q5TF21 947 aa19.74■□□□□ 0.75
TMEM106C-216ENST00000551305 CHADLQ6NUI6 762 aa19.74■□□□□ 0.75
TMEM106C-216ENST00000551305 TAF7Q15545 349 aaPredicted RBP19.73■□□□□ 0.75
TMEM106C-216ENST00000551305 TPTE2Q6XPS3 522 aa19.73■□□□□ 0.75
TMEM106C-216ENST00000551305 KLRG2A4D1S0 409 aaPredicted RBP19.72■□□□□ 0.75
TMEM106C-216ENST00000551305 HTATSF1O43719 755 aaKnown RBP19.72■□□□□ 0.75
TMEM106C-216ENST00000551305 CAPN15O75808 1086 aa19.72■□□□□ 0.75
TMEM106C-216ENST00000551305 CCDC93Q567U6 631 aa19.72■□□□□ 0.75
TMEM106C-216ENST00000551305 NGEFQ8N5V2 710 aa19.72■□□□□ 0.75
TMEM106C-216ENST00000551305 ZNF277Q9NRM2 450 aaPredicted RBP19.72■□□□□ 0.75
TMEM106C-216ENST00000551305 TNS4Q8IZW8 715 aa19.71■□□□□ 0.75
TMEM106C-216ENST00000551305 MKRN1Q9UHC7 482 aaKnown RBP19.7■□□□□ 0.74
TMEM106C-216ENST00000551305 ARFGEF2Q9Y6D5 1785 aa19.7■□□□□ 0.74
TMEM106C-216ENST00000551305 FKBP4Q02790 459 aaKnown RBP eCLIP19.7■□□□□ 0.74
TMEM106C-216ENST00000551305 ZNF541Q9H0D2 1346 aa19.69■□□□□ 0.74
TMEM106C-216ENST00000551305 TAF1DQ9H5J8 278 aaPredicted RBP19.69■□□□□ 0.74
TMEM106C-216ENST00000551305 CREBZFQ9NS37 354 aa19.69■□□□□ 0.74
TMEM106C-216ENST00000551305 GTF2E1P29083 439 aaPredicted RBP19.68■□□□□ 0.74
TMEM106C-216ENST00000551305 NUTM1Q86Y26 1132 aa19.68■□□□□ 0.74
TMEM106C-216ENST00000551305 IQCA1LA6NCM1 817 aa19.67■□□□□ 0.74
TMEM106C-216ENST00000551305 RGL2O15211 777 aa19.67■□□□□ 0.74
TMEM106C-216ENST00000551305 SYNE4Q8N205 404 aa19.67■□□□□ 0.74
TMEM106C-216ENST00000551305 L3MBTL3Q96JM7 780 aaPredicted RBP19.67■□□□□ 0.74
TMEM106C-216ENST00000551305 THUMPD2Q9BTF0 503 aaKnown RBP19.67■□□□□ 0.74
TMEM106C-216ENST00000551305 PCNTO95613 3336 aa19.66■□□□□ 0.74
TMEM106C-216ENST00000551305 TTLL7Q6ZT98 887 aa19.66■□□□□ 0.74
TMEM106C-216ENST00000551305 LDHDQ86WU2 507 aa19.66■□□□□ 0.74
TMEM106C-216ENST00000551305 RTKN2Q8IZC4 609 aa19.66■□□□□ 0.74
TMEM106C-216ENST00000551305 RRP7AQ9Y3A4 280 aaKnown RBP19.66■□□□□ 0.74
TMEM106C-216ENST00000551305 ALDH1B1P30837 517 aa19.65■□□□□ 0.74
TMEM106C-216ENST00000551305 EAPPQ56P03 285 aaPredicted RBP19.65■□□□□ 0.74
TMEM106C-216ENST00000551305 PLEKHF1Q96S99 279 aa19.65■□□□□ 0.74
TMEM106C-216ENST00000551305 PASKQ96RG2 1323 aa19.65■□□□□ 0.74
TMEM106C-216ENST00000551305 ABCC12Q96J65 1359 aa19.65■□□□□ 0.74
TMEM106C-216ENST00000551305 MYL6BP14649 208 aa19.64■□□□□ 0.73
TMEM106C-216ENST00000551305 IARSP41252 1262 aaKnown RBP19.64■□□□□ 0.73
TMEM106C-216ENST00000551305 EIF4A1P60842 406 aaKnown RBP19.64■□□□□ 0.73
TMEM106C-216ENST00000551305 ERVV-1B6SEH8 477 aa19.63■□□□□ 0.73
TMEM106C-216ENST00000551305 GPTP24298 496 aa19.63■□□□□ 0.73
TMEM106C-216ENST00000551305 SLC51AQ86UW1 340 aa19.63■□□□□ 0.73
TMEM106C-216ENST00000551305 PNISRQ8TF01 805 aaKnown RBP19.63■□□□□ 0.73
TMEM106C-216ENST00000551305 CLEC11AQ9Y240 323 aa19.63■□□□□ 0.73
TMEM106C-216ENST00000551305 MAP3K15Q6ZN16 1313 aa19.63■□□□□ 0.73
TMEM106C-216ENST00000551305 FZD9O00144 591 aa19.62■□□□□ 0.73
TMEM106C-216ENST00000551305 ITGBL1O95965 494 aaPredicted RBP19.62■□□□□ 0.73
TMEM106C-216ENST00000551305 NEFMP07197 916 aa19.62■□□□□ 0.73
TMEM106C-216ENST00000551305 CRY2Q49AN0 593 aa19.62■□□□□ 0.73
TMEM106C-216ENST00000551305 ZBTB3Q9H5J0 574 aa19.62■□□□□ 0.73
TMEM106C-216ENST00000551305 HACL1Q9UJ83 578 aa19.62■□□□□ 0.73
TMEM106C-216ENST00000551305 RNF123Q5XPI4 1314 aa19.61■□□□□ 0.73
TMEM106C-216ENST00000551305 EPHX2P34913 555 aa19.61■□□□□ 0.73
TMEM106C-216ENST00000551305 SUSD4Q5VX71 490 aa19.61■□□□□ 0.73
TMEM106C-216ENST00000551305 NYXQ9GZU5 481 aa19.61■□□□□ 0.73
TMEM106C-216ENST00000551305 SCN4AP35499 1836 aa19.61■□□□□ 0.73
TMEM106C-216ENST00000551305 CNTNAP1P78357 1384 aa19.6■□□□□ 0.73
TMEM106C-216ENST00000551305 UBN2Q6ZU65 1347 aa19.6■□□□□ 0.73
TMEM106C-216ENST00000551305 NFE2L2Q16236 605 aa19.6■□□□□ 0.73
TMEM106C-216ENST00000551305 KIF6Q6ZMV9 814 aa19.6■□□□□ 0.73
TMEM106C-216ENST00000551305 LAMB4A4D0S4 1761 aa19.6■□□□□ 0.73
TMEM106C-216ENST00000551305 DLG5Q8TDM6 1919 aa19.6■□□□□ 0.73
TMEM106C-216ENST00000551305 KDM3BQ7LBC6 1761 aa19.59■□□□□ 0.73
TMEM106C-216ENST00000551305 SNED1Q8TER0 1413 aa19.59■□□□□ 0.73
TMEM106C-216ENST00000551305 TMEM88BA6NKF7 163 aa19.58■□□□□ 0.73
TMEM106C-216ENST00000551305 TCERG1O14776 1098 aaKnown RBP19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms