RNA–Protein interactions for RNA: ENST00000551219.5

PTPRR-211, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best)

Gene PTPRR, Length 2,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-211ENST00000551219 SGSM2O43147 1006 aa8.02□□□□□ -1.13
PTPRR-211ENST00000551219 UBTFL1P0CB47 393 aaPredicted RBP8.02□□□□□ -1.13
PTPRR-211ENST00000551219 GTF2F1P35269 517 aaKnown RBP eCLIP8.02□□□□□ -1.13
PTPRR-211ENST00000551219 MLLT3P42568 568 aaPredicted RBP8.02□□□□□ -1.13
PTPRR-211ENST00000551219 E2F4Q16254 413 aa8.02□□□□□ -1.13
PTPRR-211ENST00000551219 HSP90AB4PQ58FF6 505 aa8.02□□□□□ -1.13
PTPRR-211ENST00000551219 CNTROBQ8N137 903 aa8.02□□□□□ -1.13
PTPRR-211ENST00000551219 CHAMP1Q96JM3 812 aa8.02□□□□□ -1.13
PTPRR-211ENST00000551219 LIMCH1Q9UPQ0 1083 aa8.02□□□□□ -1.13
PTPRR-211ENST00000551219 LRRFIP2Q9Y608 721 aaKnown RBP8.02□□□□□ -1.13
PTPRR-211ENST00000551219 USP42Q9H9J4 1324 aaKnown RBP8.02□□□□□ -1.13
PTPRR-211ENST00000551219 TSHZ3Q63HK5 1081 aa8.02□□□□□ -1.13
PTPRR-211ENST00000551219 TTC14Q96N46 770 aa8.02□□□□□ -1.13
PTPRR-211ENST00000551219 SPTLC3Q9NUV7 552 aa8.02□□□□□ -1.13
PTPRR-211ENST00000551219 CRYBG1Q9Y4K1 1723 aa8.02□□□□□ -1.13
PTPRR-211ENST00000551219 TMEM2Q9UHN6 1383 aa8.02□□□□□ -1.13
PTPRR-211ENST00000551219 GADD45BO75293 160 aaPredicted RBP8.01□□□□□ -1.13
PTPRR-211ENST00000551219 KIF1BPQ96EK5 621 aa8.01□□□□□ -1.13
PTPRR-211ENST00000551219 ZSCAN31Q96LW9 406 aaPredicted RBP8.01□□□□□ -1.13
PTPRR-211ENST00000551219 UPF3BQ9BZI7 483 aaKnown RBP8.01□□□□□ -1.13
PTPRR-211ENST00000551219 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.01□□□□□ -1.13
PTPRR-211ENST00000551219 GNAT3A8MTJ3 354 aa8.01□□□□□ -1.13
PTPRR-211ENST00000551219 STX6O43752 255 aa8.01□□□□□ -1.13
PTPRR-211ENST00000551219 NOL8Q76FK4 1167 aaKnown RBP8.01□□□□□ -1.13
PTPRR-211ENST00000551219 RUFY2Q8WXA3 655 aa8.01□□□□□ -1.13
PTPRR-211ENST00000551219 SH2B1Q9NRF2 756 aaPredicted RBP8.01□□□□□ -1.13
PTPRR-211ENST00000551219 MIS18AQ9NYP9 233 aa8.01□□□□□ -1.13
PTPRR-211ENST00000551219 SMC3Q9UQE7 1217 aa8.01□□□□□ -1.13
PTPRR-211ENST00000551219 SNX14Q9Y5W7 946 aa8.01□□□□□ -1.13
PTPRR-211ENST00000551219 TNRQ92752 1358 aa8.01□□□□□ -1.13
PTPRR-211ENST00000551219 PLEKHG1Q9ULL1 1385 aa8.01□□□□□ -1.13
PTPRR-211ENST00000551219 CEP170BQ9Y4F5 1589 aaPredicted RBP8.01□□□□□ -1.13
PTPRR-211ENST00000551219 ADAMTS13Q76LX8 1427 aa8.01□□□□□ -1.13
PTPRR-211ENST00000551219 KDM4AO75164 1064 aa8.01□□□□□ -1.13
PTPRR-211ENST00000551219 F13A1P00488 732 aa8.01□□□□□ -1.13
PTPRR-211ENST00000551219 NOLC1Q14978 699 aaKnown RBP eCLIP8.01□□□□□ -1.13
PTPRR-211ENST00000551219 DNTTIP2Q5QJE6 756 aaKnown RBP8.01□□□□□ -1.13
PTPRR-211ENST00000551219 PI4K2BQ8TCG2 481 aa8.01□□□□□ -1.13
PTPRR-211ENST00000551219 LSG1Q9H089 658 aaKnown RBP8.01□□□□□ -1.13
PTPRR-211ENST00000551219 TTC41PQ6P2S7 1318 aa8□□□□□ -1.13
PTPRR-211ENST00000551219 CACNA1FO60840 1977 aa8□□□□□ -1.13
PTPRR-211ENST00000551219 DIP2BQ9P265 1576 aa8□□□□□ -1.13
PTPRR-211ENST00000551219 FOXO3O43524 673 aa8□□□□□ -1.13
PTPRR-211ENST00000551219 ADCY5O95622 1261 aa8□□□□□ -1.13
PTPRR-211ENST00000551219 UNC5CLQ8IV45 518 aa8□□□□□ -1.13
PTPRR-211ENST00000551219 CCDC94Q9BW85 323 aaPredicted RBP8□□□□□ -1.13
PTPRR-211ENST00000551219 TM6SF1Q9BZW5 370 aa8□□□□□ -1.13
PTPRR-211ENST00000551219 USP44Q9H0E7 712 aa8□□□□□ -1.13
PTPRR-211ENST00000551219 USP25Q9UHP3 1055 aa8□□□□□ -1.13
PTPRR-211ENST00000551219 GOLGA6L6A8MZA4 724 aa8□□□□□ -1.13
PTPRR-211ENST00000551219 MCM6Q14566 821 aa8□□□□□ -1.13
PTPRR-211ENST00000551219 RHPN1Q8TCX5 695 aa8□□□□□ -1.13
PTPRR-211ENST00000551219 CNPY2Q9Y2B0 182 aa8□□□□□ -1.13
PTPRR-211ENST00000551219 RIMS1Q86UR5 1692 aaKnown RBP8□□□□□ -1.13
PTPRR-211ENST00000551219 A6NJR5 290 aa7.99□□□□□ -1.13
PTPRR-211ENST00000551219 HOXB7P09629 217 aa7.99□□□□□ -1.13
PTPRR-211ENST00000551219 SYT1P21579 422 aa7.99□□□□□ -1.13
PTPRR-211ENST00000551219 AK2P54819 239 aa7.99□□□□□ -1.13
PTPRR-211ENST00000551219 VPS53Q5VIR6 699 aa7.99□□□□□ -1.13
PTPRR-211ENST00000551219 EYA1Q99502 592 aa7.99□□□□□ -1.13
PTPRR-211ENST00000551219 FUCA2Q9BTY2 467 aa7.99□□□□□ -1.13
PTPRR-211ENST00000551219 GDPD2Q9HCC8 539 aa7.99□□□□□ -1.13
PTPRR-211ENST00000551219 UBR1Q8IWV7 1749 aa7.99□□□□□ -1.13
PTPRR-211ENST00000551219 USP54Q70EL1 1684 aa7.99□□□□□ -1.13
PTPRR-211ENST00000551219 GLRX3O76003 335 aaKnown RBP7.99□□□□□ -1.13
PTPRR-211ENST00000551219 AMPHP49418 695 aa7.99□□□□□ -1.13
PTPRR-211ENST00000551219 PDE4CQ08493 712 aa7.99□□□□□ -1.13
PTPRR-211ENST00000551219 TAF7Q15545 349 aaPredicted RBP7.99□□□□□ -1.13
PTPRR-211ENST00000551219 DCAF8Q5TAQ9 597 aa7.99□□□□□ -1.13
PTPRR-211ENST00000551219 KCNB2Q92953 911 aa7.99□□□□□ -1.13
PTPRR-211ENST00000551219 ESF1Q9H501 851 aaKnown RBP7.99□□□□□ -1.13
PTPRR-211ENST00000551219 DIAPH3Q9NSV4 1193 aa7.99□□□□□ -1.13
PTPRR-211ENST00000551219 DIP2AQ14689 1571 aa7.99□□□□□ -1.13
PTPRR-211ENST00000551219 SURF6O75683 361 aaKnown RBP7.98□□□□□ -1.13
PTPRR-211ENST00000551219 HCLS1P14317 486 aaPredicted RBP7.98□□□□□ -1.13
PTPRR-211ENST00000551219 RUFY3Q7L099 469 aa7.98□□□□□ -1.13
PTPRR-211ENST00000551219 GPIHBP1Q8IV16 184 aa7.98□□□□□ -1.13
PTPRR-211ENST00000551219 GPATCH3Q96I76 525 aa7.98□□□□□ -1.13
PTPRR-211ENST00000551219 HDAC5Q9UQL6 1122 aa7.98□□□□□ -1.13
PTPRR-211ENST00000551219 CCDC171Q6TFL3 1326 aa7.98□□□□□ -1.13
PTPRR-211ENST00000551219 CHAF1AQ13111 956 aaPredicted RBP7.98□□□□□ -1.13
PTPRR-211ENST00000551219 PPP1R42Q7Z4L9 355 aa7.98□□□□□ -1.13
PTPRR-211ENST00000551219 PROSER2Q86WR7 435 aaPredicted RBP7.98□□□□□ -1.13
PTPRR-211ENST00000551219 NUTM1Q86Y26 1132 aa7.98□□□□□ -1.13
PTPRR-211ENST00000551219 IL1RAPL2Q9NP60 686 aa7.98□□□□□ -1.13
PTPRR-211ENST00000551219 CCDC192P0DO97 292 aa7.98□□□□□ -1.13
PTPRR-211ENST00000551219 HDGFL1Q5TGJ6 251 aa7.98□□□□□ -1.13
PTPRR-211ENST00000551219 HYPKQ9NX55 129 aa7.98□□□□□ -1.13
PTPRR-211ENST00000551219 KIF3AQ9Y496 699 aa7.98□□□□□ -1.13
PTPRR-211ENST00000551219 NWD1Q149M9 1564 aa7.97□□□□□ -1.13
PTPRR-211ENST00000551219 ADGRL3Q9HAR2 1447 aa7.97□□□□□ -1.13
PTPRR-211ENST00000551219 ELP1O95163 1332 aa7.97□□□□□ -1.13
PTPRR-211ENST00000551219 HIP1O00291 1037 aa7.97□□□□□ -1.13
PTPRR-211ENST00000551219 IL25Q9H293 177 aa7.97□□□□□ -1.13
PTPRR-211ENST00000551219 CYP46A1Q9Y6A2 500 aa7.97□□□□□ -1.13
PTPRR-211ENST00000551219 MED1Q15648 1581 aaPredicted RBP7.97□□□□□ -1.13
PTPRR-211ENST00000551219 ANKARQ7Z5J8 1434 aa7.97□□□□□ -1.13
PTPRR-211ENST00000551219 SRGAP3O43295 1099 aa7.97□□□□□ -1.13
PTPRR-211ENST00000551219 FIBPO43427 364 aa7.97□□□□□ -1.13
PTPRR-211ENST00000551219 FOXD4L6Q3SYB3 417 aaPredicted RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms