RNA–Protein interactions for RNA: ENST00000551160.5

BEST3-210, Transcript of bestrophin 3, humanhuman

TSL 3 BASIC

Gene BEST3, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-210ENST00000551160 OLFM4Q6UX06 510 aa13.97□□□□□ -0.17
BEST3-210ENST00000551160 CNTROBQ8N137 903 aa13.97□□□□□ -0.17
BEST3-210ENST00000551160 C7orf43Q8WVR3 580 aa13.97□□□□□ -0.17
BEST3-210ENST00000551160 MASTLQ96GX5 879 aa13.97□□□□□ -0.17
BEST3-210ENST00000551160 RNF123Q5XPI4 1314 aa13.96□□□□□ -0.17
BEST3-210ENST00000551160 CAMTA2O94983 1202 aa13.96□□□□□ -0.17
BEST3-210ENST00000551160 HMOX1P09601 288 aa13.96□□□□□ -0.17
BEST3-210ENST00000551160 ST5P78524 1137 aa13.96□□□□□ -0.17
BEST3-210ENST00000551160 MTHFSDQ2M296 383 aaKnown RBP13.96□□□□□ -0.17
BEST3-210ENST00000551160 CCDC93Q567U6 631 aa13.96□□□□□ -0.17
BEST3-210ENST00000551160 SCN7AQ01118 1682 aa13.95□□□□□ -0.18
BEST3-210ENST00000551160 SLX4Q8IY92 1834 aa13.95□□□□□ -0.18
BEST3-210ENST00000551160 TTC5Q8N0Z6 440 aa13.95□□□□□ -0.18
BEST3-210ENST00000551160 ZNF496Q96IT1 587 aaPredicted RBP13.95□□□□□ -0.18
BEST3-210ENST00000551160 SETDB2Q96T68 719 aa13.95□□□□□ -0.18
BEST3-210ENST00000551160 PCDH10Q9P2E7 1040 aa13.95□□□□□ -0.18
BEST3-210ENST00000551160 DICER1Q9UPY3 1922 aaKnown RBP13.95□□□□□ -0.18
BEST3-210ENST00000551160 ADAMTSL1Q8N6G6 1762 aa13.94□□□□□ -0.18
BEST3-210ENST00000551160 RGS19P49795 217 aa13.94□□□□□ -0.18
BEST3-210ENST00000551160 FKBP4Q02790 459 aaKnown RBP eCLIP13.94□□□□□ -0.18
BEST3-210ENST00000551160 FMR1Q06787 632 aaKnown RBP eCLIP13.94□□□□□ -0.18
BEST3-210ENST00000551160 TSKSQ9UJT2 592 aa13.94□□□□□ -0.18
BEST3-210ENST00000551160 VIRMAQ69YN4 1812 aaKnown RBP13.94□□□□□ -0.18
BEST3-210ENST00000551160 A1BGP04217 495 aa13.93□□□□□ -0.18
BEST3-210ENST00000551160 IL6STP40189 918 aaPredicted RBP13.93□□□□□ -0.18
BEST3-210ENST00000551160 GRM1Q13255 1194 aa13.93□□□□□ -0.18
BEST3-210ENST00000551160 PAXIP1Q6ZW49 1069 aaPredicted RBP13.93□□□□□ -0.18
BEST3-210ENST00000551160 PNMA8AQ86V59 439 aaPredicted RBP13.93□□□□□ -0.18
BEST3-210ENST00000551160 CAPNS2Q96L46 248 aa13.93□□□□□ -0.18
BEST3-210ENST00000551160 HEG1Q9ULI3 1381 aa13.93□□□□□ -0.18
BEST3-210ENST00000551160 CYP4F22Q6NT55 531 aa13.92□□□□□ -0.18
BEST3-210ENST00000551160 DDX21Q9NR30 783 aaKnown RBP eCLIP13.92□□□□□ -0.18
BEST3-210ENST00000551160 SCN4AP35499 1836 aa13.92□□□□□ -0.18
BEST3-210ENST00000551160 FZD9O00144 591 aa13.91□□□□□ -0.18
BEST3-210ENST00000551160 NPR1P16066 1061 aa13.91□□□□□ -0.18
BEST3-210ENST00000551160 ZNF790Q6PG37 636 aa13.91□□□□□ -0.18
BEST3-210ENST00000551160 NBPF5PQ86XG9 351 aaPredicted RBP13.91□□□□□ -0.18
BEST3-210ENST00000551160 UBR2Q8IWV8 1755 aa13.91□□□□□ -0.18
BEST3-210ENST00000551160 IARSP41252 1262 aaKnown RBP13.9□□□□□ -0.18
BEST3-210ENST00000551160 PIP4K2AP48426 406 aaPredicted RBP13.9□□□□□ -0.18
BEST3-210ENST00000551160 DZIP3Q86Y13 1208 aaKnown RBP13.9□□□□□ -0.18
BEST3-210ENST00000551160 BEGAINQ9BUH8 593 aa13.9□□□□□ -0.18
BEST3-210ENST00000551160 TRAF5O00463 557 aa13.89□□□□□ -0.19
BEST3-210ENST00000551160 GPC2Q8N158 579 aa13.89□□□□□ -0.19
BEST3-210ENST00000551160 SYNE4Q8N205 404 aa13.89□□□□□ -0.19
BEST3-210ENST00000551160 IL17REQ8NFR9 667 aa13.89□□□□□ -0.19
BEST3-210ENST00000551160 CFAP44Q96MT7 982 aa13.89□□□□□ -0.19
BEST3-210ENST00000551160 GPR101Q96P66 508 aaPredicted RBP13.89□□□□□ -0.19
BEST3-210ENST00000551160 TEX13AQ9BXU3 409 aaPredicted RBP13.89□□□□□ -0.19
BEST3-210ENST00000551160 THSD7BQ9C0I4 1608 aa13.89□□□□□ -0.19
BEST3-210ENST00000551160 KLRG2A4D1S0 409 aaPredicted RBP13.88□□□□□ -0.19
BEST3-210ENST00000551160 KCNQ3O43525 872 aa13.88□□□□□ -0.19
BEST3-210ENST00000551160 AOC2O75106 756 aa13.88□□□□□ -0.19
BEST3-210ENST00000551160 ECE1P42892 770 aa13.88□□□□□ -0.19
BEST3-210ENST00000551160 NPM2Q86SE8 214 aaKnown RBP13.88□□□□□ -0.19
BEST3-210ENST00000551160 RTKN2Q8IZC4 609 aa13.88□□□□□ -0.19
BEST3-210ENST00000551160 MCOLN1Q9GZU1 580 aa13.88□□□□□ -0.19
BEST3-210ENST00000551160 GJA3Q9Y6H8 435 aa13.88□□□□□ -0.19
BEST3-210ENST00000551160 TEFQ10587 303 aa13.87□□□□□ -0.19
BEST3-210ENST00000551160 CST9Q5W186 159 aa13.87□□□□□ -0.19
BEST3-210ENST00000551160 FMNL2Q96PY5 1086 aa13.87□□□□□ -0.19
BEST3-210ENST00000551160 COL4A5P29400 1685 aa13.87□□□□□ -0.19
BEST3-210ENST00000551160 ARFGEF2Q9Y6D5 1785 aa13.86□□□□□ -0.19
BEST3-210ENST00000551160 FAM177BA6PVY3 158 aa13.86□□□□□ -0.19
BEST3-210ENST00000551160 EPS15P42566 896 aa13.86□□□□□ -0.19
BEST3-210ENST00000551160 SCNN1DP51172 638 aa13.86□□□□□ -0.19
BEST3-210ENST00000551160 SLC51AQ86UW1 340 aa13.86□□□□□ -0.19
BEST3-210ENST00000551160 KNSTRNQ9Y448 316 aa13.86□□□□□ -0.19
BEST3-210ENST00000551160 TLL2Q9Y6L7 1015 aa13.86□□□□□ -0.19
BEST3-210ENST00000551160 SNED1Q8TER0 1413 aa13.86□□□□□ -0.19
BEST3-210ENST00000551160 CACNA1SQ13698 1873 aa13.85□□□□□ -0.19
BEST3-210ENST00000551160 LTBP1Q14766 1721 aa13.85□□□□□ -0.19
BEST3-210ENST00000551160 PRAMEF22A3QJZ6 481 aa13.85□□□□□ -0.19
BEST3-210ENST00000551160 LMOD1P29536 600 aaPredicted RBP13.85□□□□□ -0.19
BEST3-210ENST00000551160 AMER1Q5JTC6 1135 aaPredicted RBP13.85□□□□□ -0.19
BEST3-210ENST00000551160 USP16Q9Y5T5 823 aa13.85□□□□□ -0.19
BEST3-210ENST00000551160 HSPA5P11021 654 aaKnown RBP13.84□□□□□ -0.19
BEST3-210ENST00000551160 EIF6P56537 245 aaKnown RBP13.84□□□□□ -0.19
BEST3-210ENST00000551160 CLEC4GQ6UXB4 293 aa13.84□□□□□ -0.19
BEST3-210ENST00000551160 JDP2Q8WYK2 163 aa13.84□□□□□ -0.19
BEST3-210ENST00000551160 PSMD1Q99460 953 aa13.84□□□□□ -0.19
BEST3-210ENST00000551160 NIP7Q9Y221 180 aaKnown RBP eCLIP13.84□□□□□ -0.19
BEST3-210ENST00000551160 BCORQ6W2J9 1755 aa13.83□□□□□ -0.19
BEST3-210ENST00000551160 GNAT3A8MTJ3 354 aa13.83□□□□□ -0.2
BEST3-210ENST00000551160 DIAPH1O60610 1272 aaKnown RBP13.83□□□□□ -0.2
BEST3-210ENST00000551160 TPTE2Q6XPS3 522 aa13.83□□□□□ -0.2
BEST3-210ENST00000551160 ZNF652Q9Y2D9 606 aa13.83□□□□□ -0.2
BEST3-210ENST00000551160 ABCC12Q96J65 1359 aa13.83□□□□□ -0.2
BEST3-210ENST00000551160 MAP2K2P36507 400 aa13.82□□□□□ -0.2
BEST3-210ENST00000551160 BTBD11A6QL63 1104 aa13.81□□□□□ -0.2
BEST3-210ENST00000551160 CELF2O95319 508 aaKnown RBP13.81□□□□□ -0.2
BEST3-210ENST00000551160 ALDH1B1P30837 517 aa13.81□□□□□ -0.2
BEST3-210ENST00000551160 DGKZQ13574 1117 aa13.81□□□□□ -0.2
BEST3-210ENST00000551160 SAPCD2Q86UD0 394 aa13.81□□□□□ -0.2
BEST3-210ENST00000551160 LARGE2Q8N3Y3 721 aa13.81□□□□□ -0.2
BEST3-210ENST00000551160 GAS2L2Q8NHY3 880 aa13.81□□□□□ -0.2
BEST3-210ENST00000551160 CEMIPQ8WUJ3 1361 aa13.81□□□□□ -0.2
BEST3-210ENST00000551160 NBPF26B4DH59 902 aa13.8□□□□□ -0.2
BEST3-210ENST00000551160 CA12O43570 354 aa13.8□□□□□ -0.2
BEST3-210ENST00000551160 EIF4G2P78344 907 aaKnown RBP eCLIP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms