RNA–Protein interactions for RNA: ENST00000550964.5

PFDN5-213, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-213ENST00000550964 SRP68Q9UHB9 627 aaKnown RBP12.91□□□□□ -0.34
PFDN5-213ENST00000550964 MAP3K15Q6ZN16 1313 aa12.9□□□□□ -0.34
PFDN5-213ENST00000550964 ST5P78524 1137 aa12.9□□□□□ -0.34
PFDN5-213ENST00000550964 TWISTNBQ3B726 338 aaPredicted RBP12.9□□□□□ -0.34
PFDN5-213ENST00000550964 SALL2Q9Y467 1007 aaPredicted RBP12.9□□□□□ -0.34
PFDN5-213ENST00000550964 NRXN2Q9P2S2 1712 aa12.9□□□□□ -0.34
PFDN5-213ENST00000550964 RNF123Q5XPI4 1314 aa12.89□□□□□ -0.35
PFDN5-213ENST00000550964 POLRMTO00411 1230 aaKnown RBP12.89□□□□□ -0.35
PFDN5-213ENST00000550964 GRIN3BO60391 1043 aa12.89□□□□□ -0.35
PFDN5-213ENST00000550964 SERPINB2P05120 415 aa12.89□□□□□ -0.35
PFDN5-213ENST00000550964 HSP90B1P14625 803 aaKnown RBP12.89□□□□□ -0.35
PFDN5-213ENST00000550964 NFIXQ14938 502 aa12.89□□□□□ -0.35
PFDN5-213ENST00000550964 PARP10Q53GL7 1025 aa12.89□□□□□ -0.35
PFDN5-213ENST00000550964 ANKRD36CQ5JPF3 1778 aa12.89□□□□□ -0.35
PFDN5-213ENST00000550964 CT47B1P0C2W7 299 aaPredicted RBP12.88□□□□□ -0.35
PFDN5-213ENST00000550964 GTF2E1P29083 439 aaPredicted RBP12.88□□□□□ -0.35
PFDN5-213ENST00000550964 PDE6BP35913 854 aa12.88□□□□□ -0.35
PFDN5-213ENST00000550964 GIGYF2Q6Y7W6 1299 aaKnown RBP12.88□□□□□ -0.35
PFDN5-213ENST00000550964 SMIM5Q71RC9 77 aa12.88□□□□□ -0.35
PFDN5-213ENST00000550964 PPP1R42Q7Z4L9 355 aa12.88□□□□□ -0.35
PFDN5-213ENST00000550964 CHD4Q14839 1912 aa12.88□□□□□ -0.35
PFDN5-213ENST00000550964 ATP10DQ9P241 1426 aa12.88□□□□□ -0.35
PFDN5-213ENST00000550964 FANCIQ9NVI1 1328 aa12.88□□□□□ -0.35
PFDN5-213ENST00000550964 IBTKQ9P2D0 1353 aaPredicted RBP12.87□□□□□ -0.35
PFDN5-213ENST00000550964 PDIA6Q15084 440 aa12.87□□□□□ -0.35
PFDN5-213ENST00000550964 ANKRD13DQ6ZTN6 518 aa12.87□□□□□ -0.35
PFDN5-213ENST00000550964 COPS6Q7L5N1 327 aa12.87□□□□□ -0.35
PFDN5-213ENST00000550964 NBPF5PQ86XG9 351 aaPredicted RBP12.87□□□□□ -0.35
PFDN5-213ENST00000550964 CNBD1Q8NA66 436 aa12.87□□□□□ -0.35
PFDN5-213ENST00000550964 PLBD2Q8NHP8 589 aa12.87□□□□□ -0.35
PFDN5-213ENST00000550964 BRIP1Q9BX63 1249 aa12.87□□□□□ -0.35
PFDN5-213ENST00000550964 BCL2L12Q9HB09 334 aa12.87□□□□□ -0.35
PFDN5-213ENST00000550964 CHPF2Q9P2E5 772 aa12.87□□□□□ -0.35
PFDN5-213ENST00000550964 NIP7Q9Y221 180 aaKnown RBP eCLIP12.87□□□□□ -0.35
PFDN5-213ENST00000550964 C10orf71Q711Q0 1435 aa12.87□□□□□ -0.35
PFDN5-213ENST00000550964 ZNF521Q96K83 1311 aa12.87□□□□□ -0.35
PFDN5-213ENST00000550964 ELL2O00472 640 aaPredicted RBP12.86□□□□□ -0.35
PFDN5-213ENST00000550964 GPR162Q16538 588 aa12.86□□□□□ -0.35
PFDN5-213ENST00000550964 TBC1D9BQ66K14 1250 aa12.86□□□□□ -0.35
PFDN5-213ENST00000550964 BICDL1Q6ZP65 573 aa12.86□□□□□ -0.35
PFDN5-213ENST00000550964 C8orf58Q8NAV2 365 aa12.86□□□□□ -0.35
PFDN5-213ENST00000550964 TSR2Q969E8 191 aaKnown RBP12.86□□□□□ -0.35
PFDN5-213ENST00000550964 H0YIN7 160 aa12.85□□□□□ -0.35
PFDN5-213ENST00000550964 PIP4K2AP48426 406 aaPredicted RBP12.85□□□□□ -0.35
PFDN5-213ENST00000550964 DDR1Q08345 913 aa12.85□□□□□ -0.35
PFDN5-213ENST00000550964 XAGE3Q8WTP9 111 aa12.85□□□□□ -0.35
PFDN5-213ENST00000550964 NECTIN2Q92692 538 aa12.85□□□□□ -0.35
PFDN5-213ENST00000550964 PIM2Q9P1W9 311 aa12.85□□□□□ -0.35
PFDN5-213ENST00000550964 NEXNQ0ZGT2 675 aa12.84□□□□□ -0.35
PFDN5-213ENST00000550964 AIMP1Q12904 312 aaKnown RBP12.84□□□□□ -0.35
PFDN5-213ENST00000550964 TCIRG1Q13488 830 aa12.84□□□□□ -0.35
PFDN5-213ENST00000550964 RIC3Q7Z5B4 369 aa12.84□□□□□ -0.35
PFDN5-213ENST00000550964 ZBTB3Q9H5J0 574 aa12.84□□□□□ -0.35
PFDN5-213ENST00000550964 DLEC1Q9Y238 1755 aa12.84□□□□□ -0.35
PFDN5-213ENST00000550964 ARFGEF1Q9Y6D6 1849 aa12.83□□□□□ -0.35
PFDN5-213ENST00000550964 BRCA1P38398 1863 aaKnown RBP12.83□□□□□ -0.36
PFDN5-213ENST00000550964 EXOSC9Q06265 439 aaKnown RBP12.83□□□□□ -0.36
PFDN5-213ENST00000550964 SLFN5Q08AF3 891 aa12.83□□□□□ -0.36
PFDN5-213ENST00000550964 KRT24Q2M2I5 525 aa12.83□□□□□ -0.36
PFDN5-213ENST00000550964 TTLL7Q6ZT98 887 aa12.83□□□□□ -0.36
PFDN5-213ENST00000550964 LRP10Q7Z4F1 713 aa12.83□□□□□ -0.36
PFDN5-213ENST00000550964 ZNF34Q8IZ26 560 aa12.83□□□□□ -0.36
PFDN5-213ENST00000550964 N4BP2Q86UW6 1770 aaPredicted RBP12.83□□□□□ -0.36
PFDN5-213ENST00000550964 ARFGEF2Q9Y6D5 1785 aa12.83□□□□□ -0.36
PFDN5-213ENST00000550964 RIC1Q4ADV7 1423 aa12.82□□□□□ -0.36
PFDN5-213ENST00000550964 VAMP4O75379 141 aa12.82□□□□□ -0.36
PFDN5-213ENST00000550964 SLC4A2P04920 1241 aa12.82□□□□□ -0.36
PFDN5-213ENST00000550964 TRIM28Q13263 835 aaKnown RBP12.82□□□□□ -0.36
PFDN5-213ENST00000550964 UTP14AQ9BVJ6 771 aaKnown RBP12.82□□□□□ -0.36
PFDN5-213ENST00000550964 ALDH1B1P30837 517 aa12.81□□□□□ -0.36
PFDN5-213ENST00000550964 HNRNPUQ00839 825 aaKnown RBP eCLIP12.81□□□□□ -0.36
PFDN5-213ENST00000550964 HLFQ16534 295 aa12.81□□□□□ -0.36
PFDN5-213ENST00000550964 PROSER3Q2NL68 480 aa12.81□□□□□ -0.36
PFDN5-213ENST00000550964 DALRD3Q5D0E6 543 aaKnown RBP12.81□□□□□ -0.36
PFDN5-213ENST00000550964 SOGA3Q5TF21 947 aa12.81□□□□□ -0.36
PFDN5-213ENST00000550964 PRR5LQ6MZQ0 368 aa12.81□□□□□ -0.36
PFDN5-213ENST00000550964 KSR2Q6VAB6 950 aa12.81□□□□□ -0.36
PFDN5-213ENST00000550964 TSPYL6Q8N831 410 aa12.81□□□□□ -0.36
PFDN5-213ENST00000550964 CNKSR1Q969H4 720 aa12.81□□□□□ -0.36
PFDN5-213ENST00000550964 PXDNLA1KZ92 1463 aa12.8□□□□□ -0.36
PFDN5-213ENST00000550964 ALDH1L2Q3SY69 923 aa12.8□□□□□ -0.36
PFDN5-213ENST00000550964 GRIPAP1Q4V328 841 aa12.8□□□□□ -0.36
PFDN5-213ENST00000550964 PELP1Q8IZL8 1130 aaKnown RBP12.8□□□□□ -0.36
PFDN5-213ENST00000550964 TTLL6Q8N841 843 aa12.8□□□□□ -0.36
PFDN5-213ENST00000550964 NLGN2Q8NFZ4 835 aa12.8□□□□□ -0.36
PFDN5-213ENST00000550964 MASTLQ96GX5 879 aa12.8□□□□□ -0.36
PFDN5-213ENST00000550964 NLRP3Q96P20 1036 aa12.8□□□□□ -0.36
PFDN5-213ENST00000550964 TMX4Q9H1E5 349 aaPredicted RBP12.8□□□□□ -0.36
PFDN5-213ENST00000550964 ANKRD31Q8N7Z5 1873 aa12.79□□□□□ -0.36
PFDN5-213ENST00000550964 ANXA1P04083 346 aa12.79□□□□□ -0.36
PFDN5-213ENST00000550964 DPEP1P16444 411 aa12.79□□□□□ -0.36
PFDN5-213ENST00000550964 STYK1Q6J9G0 422 aa12.79□□□□□ -0.36
PFDN5-213ENST00000550964 C2CD5Q86YS7 1000 aa12.79□□□□□ -0.36
PFDN5-213ENST00000550964 CCDC191Q8NCU4 936 aa12.79□□□□□ -0.36
PFDN5-213ENST00000550964 SH3TC1Q8TE82 1336 aa12.79□□□□□ -0.36
PFDN5-213ENST00000550964 KIAA1551Q9HCM1 1747 aa12.79□□□□□ -0.36
PFDN5-213ENST00000550964 A0A0G2JLW4 131 aa12.78□□□□□ -0.36
PFDN5-213ENST00000550964 KLRG2A4D1S0 409 aaPredicted RBP12.78□□□□□ -0.36
PFDN5-213ENST00000550964 NPR1P16066 1061 aa12.78□□□□□ -0.36
PFDN5-213ENST00000550964 FLIIQ13045 1269 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms