RNA–Protein interactions for RNA: ENST00000550898.1

KRR1-204, Transcript of KRR1, small subunit processome component homolog, humanhuman

TSL 2

Gene KRR1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-204ENST00000550898 MARCH10Q8NA82 808 aaPredicted RBP9.59□□□□□ -0.87
KRR1-204ENST00000550898 MEGF6O75095 1541 aa9.59□□□□□ -0.87
KRR1-204ENST00000550898 BRWD3Q6RI45 1802 aa9.59□□□□□ -0.88
KRR1-204ENST00000550898 NCAPD2Q15021 1401 aa9.58□□□□□ -0.88
KRR1-204ENST00000550898 MTHFSP49914 203 aa9.58□□□□□ -0.88
KRR1-204ENST00000550898 ZCRB1Q8TBF4 217 aaKnown RBP9.58□□□□□ -0.88
KRR1-204ENST00000550898 EYA1Q99502 592 aa9.58□□□□□ -0.88
KRR1-204ENST00000550898 RBM27Q9P2N5 1060 aaKnown RBP9.58□□□□□ -0.88
KRR1-204ENST00000550898 PLEKHG2Q9H7P9 1386 aa9.58□□□□□ -0.88
KRR1-204ENST00000550898 WNK3Q9BYP7 1800 aa9.58□□□□□ -0.88
KRR1-204ENST00000550898 RGPD5Q99666 1765 aa9.58□□□□□ -0.88
KRR1-204ENST00000550898 IGSF1Q8N6C5 1336 aa9.57□□□□□ -0.88
KRR1-204ENST00000550898 PCDH11XQ9BZA7 1347 aa9.57□□□□□ -0.88
KRR1-204ENST00000550898 PCDH11YQ9BZA8 1340 aa9.57□□□□□ -0.88
KRR1-204ENST00000550898 APBA3O96018 575 aa9.57□□□□□ -0.88
KRR1-204ENST00000550898 SWT1Q5T5J6 900 aaKnown RBP9.57□□□□□ -0.88
KRR1-204ENST00000550898 DEFB132Q7Z7B7 95 aa9.57□□□□□ -0.88
KRR1-204ENST00000550898 NKX2-3Q8TAU0 364 aa9.57□□□□□ -0.88
KRR1-204ENST00000550898 DDX54Q8TDD1 881 aaKnown RBP9.57□□□□□ -0.88
KRR1-204ENST00000550898 EP400Q96L91 3159 aa9.57□□□□□ -0.88
KRR1-204ENST00000550898 PARD3Q8TEW0 1356 aa9.56□□□□□ -0.88
KRR1-204ENST00000550898 RNF40O75150 1001 aa9.56□□□□□ -0.88
KRR1-204ENST00000550898 CFAP53Q96M91 514 aa9.56□□□□□ -0.88
KRR1-204ENST00000550898 SPG7Q9UQ90 795 aa9.56□□□□□ -0.88
KRR1-204ENST00000550898 DIAPH1O60610 1272 aaKnown RBP9.55□□□□□ -0.88
KRR1-204ENST00000550898 IL13P35225 146 aa9.55□□□□□ -0.88
KRR1-204ENST00000550898 DDX10Q13206 875 aaKnown RBP9.55□□□□□ -0.88
KRR1-204ENST00000550898 PPP1R18Q6NYC8 613 aa9.55□□□□□ -0.88
KRR1-204ENST00000550898 RGPD1P0DJD0 1748 aa9.55□□□□□ -0.88
KRR1-204ENST00000550898 ACSBG1Q96GR2 724 aa9.54□□□□□ -0.88
KRR1-204ENST00000550898 PPP2R1AP30153 589 aa9.53□□□□□ -0.88
KRR1-204ENST00000550898 FAM161AQ3B820 660 aa9.53□□□□□ -0.88
KRR1-204ENST00000550898 SULT6B1Q6IMI4 303 aa9.53□□□□□ -0.88
KRR1-204ENST00000550898 ARHGEF1Q92888 912 aaKnown RBP9.53□□□□□ -0.88
KRR1-204ENST00000550898 KDRP35968 1356 aa9.52□□□□□ -0.88
KRR1-204ENST00000550898 RALBP1Q15311 655 aa9.52□□□□□ -0.89
KRR1-204ENST00000550898 EZH2Q15910 746 aaKnown RBP9.52□□□□□ -0.89
KRR1-204ENST00000550898 AMOTQ4VCS5 1084 aa9.52□□□□□ -0.89
KRR1-204ENST00000550898 PLEKHO1Q53GL0 409 aaPredicted RBP9.52□□□□□ -0.89
KRR1-204ENST00000550898 SYTL4Q96C24 671 aaPredicted RBP9.52□□□□□ -0.89
KRR1-204ENST00000550898 CAMKK2Q96RR4 588 aa9.52□□□□□ -0.89
KRR1-204ENST00000550898 IL21Q9HBE4 155 aa9.52□□□□□ -0.89
KRR1-204ENST00000550898 TNS1Q9HBL0 1735 aaKnown RBP9.52□□□□□ -0.89
KRR1-204ENST00000550898 NUDCQ9Y266 331 aa9.52□□□□□ -0.89
KRR1-204ENST00000550898 COL3A1P02461 1466 aaPredicted RBP9.52□□□□□ -0.89
KRR1-204ENST00000550898 U2SURPO15042 1029 aaKnown RBP9.51□□□□□ -0.89
KRR1-204ENST00000550898 PLSCR1O15162 318 aa9.51□□□□□ -0.89
KRR1-204ENST00000550898 CYP27B1O15528 508 aa9.51□□□□□ -0.89
KRR1-204ENST00000550898 KCNQ2O43526 872 aa9.51□□□□□ -0.89
KRR1-204ENST00000550898 HSP90AB1P08238 724 aaKnown RBP9.51□□□□□ -0.89
KRR1-204ENST00000550898 PTGDRQ13258 359 aa9.51□□□□□ -0.89
KRR1-204ENST00000550898 Q6ZNB5 142 aa9.51□□□□□ -0.89
KRR1-204ENST00000550898 AEBP1Q8IUX7 1158 aa9.51□□□□□ -0.89
KRR1-204ENST00000550898 IFNL2Q8IZJ0 200 aa9.51□□□□□ -0.89
KRR1-204ENST00000550898 MAP2P11137 1827 aaKnown RBP9.5□□□□□ -0.89
KRR1-204ENST00000550898 HMOX1P09601 288 aa9.5□□□□□ -0.89
KRR1-204ENST00000550898 PHKG2P15735 406 aa9.5□□□□□ -0.89
KRR1-204ENST00000550898 COPS2P61201 443 aa9.5□□□□□ -0.89
KRR1-204ENST00000550898 C1orf141Q5JVX7 400 aa9.5□□□□□ -0.89
KRR1-204ENST00000550898 PTF1AQ7RTS3 328 aa9.5□□□□□ -0.89
KRR1-204ENST00000550898 NHSQ6T4R5 1651 aa9.5□□□□□ -0.89
KRR1-204ENST00000550898 NBPF14Q5TI25 921 aa9.49□□□□□ -0.89
KRR1-204ENST00000550898 ZNF530Q6P9A1 599 aaPredicted RBP9.49□□□□□ -0.89
KRR1-204ENST00000550898 PRKD2Q9BZL6 878 aa9.49□□□□□ -0.89
KRR1-204ENST00000550898 RGPD2P0DJD1 1756 aa9.49□□□□□ -0.89
KRR1-204ENST00000550898 PKD1L3Q7Z443 1732 aa9.48□□□□□ -0.89
KRR1-204ENST00000550898 TXNRD1Q16881 649 aa9.48□□□□□ -0.89
KRR1-204ENST00000550898 MYBBP1AQ9BQG0 1328 aaKnown RBP9.48□□□□□ -0.89
KRR1-204ENST00000550898 U2AF1L5P0DN76 240 aaPredicted RBP9.47□□□□□ -0.89
KRR1-204ENST00000550898 U2AF1Q01081 240 aaKnown RBP eCLIP9.47□□□□□ -0.89
KRR1-204ENST00000550898 AKAP4Q5JQC9 854 aa9.47□□□□□ -0.89
KRR1-204ENST00000550898 DCAF5Q96JK2 942 aa9.47□□□□□ -0.89
KRR1-204ENST00000550898 TMOD3Q9NYL9 352 aa9.47□□□□□ -0.89
KRR1-204ENST00000550898 SHANK3Q9BYB0 1731 aa9.47□□□□□ -0.89
KRR1-204ENST00000550898 RGPD3A6NKT7 1758 aaPredicted RBP9.46□□□□□ -0.9
KRR1-204ENST00000550898 RGPD4Q7Z3J3 1758 aa9.46□□□□□ -0.9
KRR1-204ENST00000550898 TULP1O00294 542 aaPredicted RBP9.46□□□□□ -0.9
KRR1-204ENST00000550898 HMGB2P26583 209 aaKnown RBP9.46□□□□□ -0.9
KRR1-204ENST00000550898 SLC27A3Q5K4L6 730 aa9.46□□□□□ -0.9
KRR1-204ENST00000550898 MPRIPQ6WCQ1 1025 aa9.46□□□□□ -0.9
KRR1-204ENST00000550898 GAS2L2Q8NHY3 880 aa9.46□□□□□ -0.9
KRR1-204ENST00000550898 EMID1Q96A84 441 aaPredicted RBP9.46□□□□□ -0.9
KRR1-204ENST00000550898 ADGRG1Q9Y653 693 aa9.46□□□□□ -0.9
KRR1-204ENST00000550898 DOT1LQ8TEK3 1739 aa9.45□□□□□ -0.9
KRR1-204ENST00000550898 ERVV-2B6SEH9 535 aa9.45□□□□□ -0.9
KRR1-204ENST00000550898 SEMA3EO15041 775 aa9.45□□□□□ -0.9
KRR1-204ENST00000550898 GFRA3O60609 400 aa9.45□□□□□ -0.9
KRR1-204ENST00000550898 NEFMP07197 916 aa9.45□□□□□ -0.9
KRR1-204ENST00000550898 PRKAR2BP31323 418 aa9.45□□□□□ -0.9
KRR1-204ENST00000550898 R3HDM1Q15032 1099 aaKnown RBP9.45□□□□□ -0.9
KRR1-204ENST00000550898 SMARCC1Q92922 1105 aaPredicted RBP9.45□□□□□ -0.9
KRR1-204ENST00000550898 RSPH6AQ9H0K4 717 aa9.45□□□□□ -0.9
KRR1-204ENST00000550898 PRKRIP1Q9H875 184 aaPredicted RBP9.45□□□□□ -0.9
KRR1-204ENST00000550898 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.45□□□□□ -0.9
KRR1-204ENST00000550898 STK32BQ9NY57 414 aa9.45□□□□□ -0.9
KRR1-204ENST00000550898 PALLDQ8WX93 1383 aa9.45□□□□□ -0.9
KRR1-204ENST00000550898 FCHSD2O94868 740 aa9.44□□□□□ -0.9
KRR1-204ENST00000550898 CABP4P57796 275 aa9.44□□□□□ -0.9
KRR1-204ENST00000550898 MTHFSDQ2M296 383 aaKnown RBP9.44□□□□□ -0.9
KRR1-204ENST00000550898 SLF2Q8IX21 1173 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms