RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 GOLGA6L10A0A0M3HER8 536 aa14.45□□□□□ -0.1
RAB3IP-212ENST00000550536 PYM1Q9BRP8 204 aaKnown RBP14.45□□□□□ -0.1
RAB3IP-212ENST00000550536 AK9Q5TCS8 1911 aa14.45□□□□□ -0.1
RAB3IP-212ENST00000550536 ZSCAN30Q86W11 494 aa14.45□□□□□ -0.1
RAB3IP-212ENST00000550536 CNNM3Q8NE01 707 aa14.45□□□□□ -0.1
RAB3IP-212ENST00000550536 ERICH4A6NGS2 130 aa14.45□□□□□ -0.1
RAB3IP-212ENST00000550536 LIMCH1Q9UPQ0 1083 aa14.45□□□□□ -0.1
RAB3IP-212ENST00000550536 ABCC5O15440 1437 aa14.45□□□□□ -0.1
RAB3IP-212ENST00000550536 IBSPP21815 317 aaPredicted RBP14.45□□□□□ -0.1
RAB3IP-212ENST00000550536 SSH1Q8WYL5 1049 aa14.45□□□□□ -0.1
RAB3IP-212ENST00000550536 RRP9O43818 475 aaKnown RBP14.45□□□□□ -0.1
RAB3IP-212ENST00000550536 EVI5LQ96CN4 794 aa14.45□□□□□ -0.1
RAB3IP-212ENST00000550536 NCOA1Q15788 1441 aa14.45□□□□□ -0.1
RAB3IP-212ENST00000550536 AMPD3Q01432 767 aa14.45□□□□□ -0.1
RAB3IP-212ENST00000550536 BAG4O95429 457 aaKnown RBP14.45□□□□□ -0.1
RAB3IP-212ENST00000550536 FAM114A1Q8IWE2 563 aa14.45□□□□□ -0.1
RAB3IP-212ENST00000550536 CALML4Q96GE6 196 aa14.45□□□□□ -0.1
RAB3IP-212ENST00000550536 PRKCSHP14314 528 aaPredicted RBP14.44□□□□□ -0.1
RAB3IP-212ENST00000550536 NF2P35240 595 aa14.44□□□□□ -0.1
RAB3IP-212ENST00000550536 FERMT3Q86UX7 667 aa14.44□□□□□ -0.1
RAB3IP-212ENST00000550536 CTNNBL1Q8WYA6 563 aaPredicted RBP14.44□□□□□ -0.1
RAB3IP-212ENST00000550536 DBF4Q9UBU7 674 aaPredicted RBP14.44□□□□□ -0.1
RAB3IP-212ENST00000550536 YEATS4O95619 227 aa14.44□□□□□ -0.1
RAB3IP-212ENST00000550536 PDE4BQ07343 736 aa14.44□□□□□ -0.1
RAB3IP-212ENST00000550536 CHMP4BP1P59074 171 aa14.44□□□□□ -0.1
RAB3IP-212ENST00000550536 TRMT112Q9UI30 125 aaKnown RBP14.44□□□□□ -0.1
RAB3IP-212ENST00000550536 TTC21AQ8NDW8 1320 aa14.44□□□□□ -0.1
RAB3IP-212ENST00000550536 RARSP54136 660 aaKnown RBP14.44□□□□□ -0.1
RAB3IP-212ENST00000550536 TTLL12Q14166 644 aaPredicted RBP14.43□□□□□ -0.1
RAB3IP-212ENST00000550536 GSDMDP57764 484 aa14.43□□□□□ -0.1
RAB3IP-212ENST00000550536 DNAAF4Q8WXU2 420 aa14.43□□□□□ -0.1
RAB3IP-212ENST00000550536 IFIT3O14879 490 aaKnown RBP14.43□□□□□ -0.1
RAB3IP-212ENST00000550536 CTNNA2P26232 953 aa14.43□□□□□ -0.1
RAB3IP-212ENST00000550536 TCP11L1Q9NUJ3 509 aa14.43□□□□□ -0.1
RAB3IP-212ENST00000550536 NLRP5P59047 1200 aa14.43□□□□□ -0.1
RAB3IP-212ENST00000550536 FERMT2Q96AC1 680 aa14.42□□□□□ -0.1
RAB3IP-212ENST00000550536 THUMPD2Q9BTF0 503 aaKnown RBP14.42□□□□□ -0.1
RAB3IP-212ENST00000550536 DHX29Q7Z478 1369 aaKnown RBP14.42□□□□□ -0.1
RAB3IP-212ENST00000550536 STXBP4Q6ZWJ1 553 aa14.42□□□□□ -0.1
RAB3IP-212ENST00000550536 NEMFO60524 1076 aa14.42□□□□□ -0.1
RAB3IP-212ENST00000550536 BAG3O95817 575 aa14.42□□□□□ -0.1
RAB3IP-212ENST00000550536 GIGYF2Q6Y7W6 1299 aaKnown RBP14.42□□□□□ -0.1
RAB3IP-212ENST00000550536 DRC1Q96MC2 740 aa14.42□□□□□ -0.1
RAB3IP-212ENST00000550536 NAA15Q9BXJ9 866 aaKnown RBP14.42□□□□□ -0.1
RAB3IP-212ENST00000550536 MACROD2A1Z1Q3 448 aa14.42□□□□□ -0.1
RAB3IP-212ENST00000550536 WAPLQ7Z5K2 1190 aa14.42□□□□□ -0.1
RAB3IP-212ENST00000550536 FANCAO15360 1455 aa14.42□□□□□ -0.1
RAB3IP-212ENST00000550536 SPTY2D1Q68D10 685 aaPredicted RBP14.42□□□□□ -0.1
RAB3IP-212ENST00000550536 PIK3R4Q99570 1358 aa14.41□□□□□ -0.1
RAB3IP-212ENST00000550536 KANK3Q6NY19 840 aa14.41□□□□□ -0.1
RAB3IP-212ENST00000550536 CDC5LQ99459 802 aaKnown RBP14.41□□□□□ -0.1
RAB3IP-212ENST00000550536 MPHOSPH6Q99547 160 aaKnown RBP14.41□□□□□ -0.1
RAB3IP-212ENST00000550536 DUOX2Q9NRD8 1548 aa14.41□□□□□ -0.1
RAB3IP-212ENST00000550536 KIF4BQ2VIQ3 1234 aa14.41□□□□□ -0.1
RAB3IP-212ENST00000550536 PAFAH1B1P43034 410 aa14.41□□□□□ -0.1
RAB3IP-212ENST00000550536 CWC25Q9NXE8 425 aaPredicted RBP14.41□□□□□ -0.1
RAB3IP-212ENST00000550536 MYO5CQ9NQX4 1742 aa14.41□□□□□ -0.1
RAB3IP-212ENST00000550536 GRIN2AQ12879 1464 aa14.41□□□□□ -0.1
RAB3IP-212ENST00000550536 HMG20BQ9P0W2 317 aa14.41□□□□□ -0.1
RAB3IP-212ENST00000550536 POTEB2H3BUK9 544 aa14.41□□□□□ -0.1
RAB3IP-212ENST00000550536 MFSD6Q6ZSS7 791 aa14.41□□□□□ -0.1
RAB3IP-212ENST00000550536 MAP3K2Q9Y2U5 619 aa14.41□□□□□ -0.1
RAB3IP-212ENST00000550536 GOLGA8AA7E2F4 631 aa14.41□□□□□ -0.1
RAB3IP-212ENST00000550536 DHX37Q8IY37 1157 aaKnown RBP14.41□□□□□ -0.1
RAB3IP-212ENST00000550536 USHBP1Q8N6Y0 703 aa14.41□□□□□ -0.1
RAB3IP-212ENST00000550536 FEZ1Q99689 392 aa14.4□□□□□ -0.1
RAB3IP-212ENST00000550536 CGNQ9P2M7 1197 aaKnown RBP14.4□□□□□ -0.1
RAB3IP-212ENST00000550536 TDRD12Q587J7 1177 aaKnown RBP14.4□□□□□ -0.1
RAB3IP-212ENST00000550536 TMEM67Q5HYA8 995 aa14.4□□□□□ -0.1
RAB3IP-212ENST00000550536 FERMT1Q9BQL6 677 aa14.4□□□□□ -0.1
RAB3IP-212ENST00000550536 SYCP3Q8IZU3 236 aa14.4□□□□□ -0.1
RAB3IP-212ENST00000550536 CCDC82Q8N4S0 544 aa14.4□□□□□ -0.1
RAB3IP-212ENST00000550536 GOLGA6L9A6NEM1 432 aa14.4□□□□□ -0.1
RAB3IP-212ENST00000550536 CCT2P78371 535 aaKnown RBP14.4□□□□□ -0.1
RAB3IP-212ENST00000550536 SPDYE4A6NLX3 237 aa14.4□□□□□ -0.11
RAB3IP-212ENST00000550536 FSIP1Q8NA03 581 aa14.4□□□□□ -0.11
RAB3IP-212ENST00000550536 CAVIN2O95810 425 aa14.39□□□□□ -0.11
RAB3IP-212ENST00000550536 DDX19AQ9NUU7 478 aaKnown RBP14.39□□□□□ -0.11
RAB3IP-212ENST00000550536 MTIF2P46199 727 aaKnown RBP14.39□□□□□ -0.11
RAB3IP-212ENST00000550536 TMEM87AQ8NBN3 555 aa14.39□□□□□ -0.11
RAB3IP-212ENST00000550536 IL27Q8NEV9 243 aa14.39□□□□□ -0.11
RAB3IP-212ENST00000550536 HLA-DOAP06340 250 aa14.39□□□□□ -0.11
RAB3IP-212ENST00000550536 GUCY1B3Q02153 619 aa14.39□□□□□ -0.11
RAB3IP-212ENST00000550536 MICALCLQ6ZW33 695 aa14.39□□□□□ -0.11
RAB3IP-212ENST00000550536 TEX13AQ9BXU3 409 aaPredicted RBP14.39□□□□□ -0.11
RAB3IP-212ENST00000550536 BCCIPQ9P287 314 aaKnown RBP eCLIP14.39□□□□□ -0.11
RAB3IP-212ENST00000550536 SMC1AQ14683 1233 aaKnown RBP14.38□□□□□ -0.11
RAB3IP-212ENST00000550536 EHBP1Q8NDI1 1231 aa14.38□□□□□ -0.11
RAB3IP-212ENST00000550536 EIF4G3O43432 1585 aaKnown RBP14.38□□□□□ -0.11
RAB3IP-212ENST00000550536 WDR78Q5VTH9 848 aa14.38□□□□□ -0.11
RAB3IP-212ENST00000550536 KAT14Q9H8E8 782 aa14.38□□□□□ -0.11
RAB3IP-212ENST00000550536 PLB1Q6P1J6 1458 aa14.38□□□□□ -0.11
RAB3IP-212ENST00000550536 FLIIQ13045 1269 aa14.38□□□□□ -0.11
RAB3IP-212ENST00000550536 METAP2P50579 478 aaKnown RBP eCLIP14.38□□□□□ -0.11
RAB3IP-212ENST00000550536 SAMM50Q9Y512 469 aa14.38□□□□□ -0.11
RAB3IP-212ENST00000550536 STX6O43752 255 aa14.38□□□□□ -0.11
RAB3IP-212ENST00000550536 CKAP2LQ8IYA6 745 aa14.38□□□□□ -0.11
RAB3IP-212ENST00000550536 KDM5BQ9UGL1 1544 aa14.38□□□□□ -0.11
RAB3IP-212ENST00000550536 GJB2P29033 226 aa14.38□□□□□ -0.11
RAB3IP-212ENST00000550536 GOLIM4O00461 696 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms