RNA–Protein interactions for RNA: ENST00000550436.4

SVOP-203, Transcript of SV2 related protein, humanhuman

TSL 4

Gene SVOP, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-203ENST00000550436 CHADLQ6NUI6 762 aa20.26■□□□□ 0.83
SVOP-203ENST00000550436 GAS2L2Q8NHY3 880 aa20.26■□□□□ 0.83
SVOP-203ENST00000550436 FMNL2Q96PY5 1086 aa20.26■□□□□ 0.83
SVOP-203ENST00000550436 TEX13AQ9BXU3 409 aaPredicted RBP20.26■□□□□ 0.83
SVOP-203ENST00000550436 BCORQ6W2J9 1755 aa20.26■□□□□ 0.83
SVOP-203ENST00000550436 OLFM4Q6UX06 510 aa20.25■□□□□ 0.83
SVOP-203ENST00000550436 DZIP3Q86Y13 1208 aaKnown RBP20.25■□□□□ 0.83
SVOP-203ENST00000550436 LTBP3Q9NS15 1303 aa20.25■□□□□ 0.83
SVOP-203ENST00000550436 NPHP1O15259 732 aa20.24■□□□□ 0.83
SVOP-203ENST00000550436 STYK1Q6J9G0 422 aa20.24■□□□□ 0.83
SVOP-203ENST00000550436 CNKSR1Q969H4 720 aa20.24■□□□□ 0.83
SVOP-203ENST00000550436 PDZRN3Q9UPQ7 1066 aa20.24■□□□□ 0.83
SVOP-203ENST00000550436 ARFGEF2Q9Y6D5 1785 aa20.23■□□□□ 0.83
SVOP-203ENST00000550436 CEMIPQ8WUJ3 1361 aa20.23■□□□□ 0.83
SVOP-203ENST00000550436 BTBD11A6QL63 1104 aa20.23■□□□□ 0.83
SVOP-203ENST00000550436 C7orf43Q8WVR3 580 aa20.23■□□□□ 0.83
SVOP-203ENST00000550436 PRKAR2BP31323 418 aa20.22■□□□□ 0.83
SVOP-203ENST00000550436 ST5P78524 1137 aa20.22■□□□□ 0.83
SVOP-203ENST00000550436 MASTLQ96GX5 879 aa20.22■□□□□ 0.83
SVOP-203ENST00000550436 CREBZFQ9NS37 354 aa20.21■□□□□ 0.83
SVOP-203ENST00000550436 FAM177BA6PVY3 158 aa20.2■□□□□ 0.82
SVOP-203ENST00000550436 NPM2Q86SE8 214 aaKnown RBP20.2■□□□□ 0.82
SVOP-203ENST00000550436 RSPH6AQ9H0K4 717 aa20.2■□□□□ 0.82
SVOP-203ENST00000550436 NBPF26B4DH59 902 aa20.19■□□□□ 0.82
SVOP-203ENST00000550436 NBPF10Q6P3W6 841 aaKnown RBP20.19■□□□□ 0.82
SVOP-203ENST00000550436 MCM10Q7L590 875 aa20.19■□□□□ 0.82
SVOP-203ENST00000550436 NBPF5PQ86XG9 351 aaPredicted RBP20.19■□□□□ 0.82
SVOP-203ENST00000550436 NBPF15Q8N660 670 aa20.19■□□□□ 0.82
SVOP-203ENST00000550436 ZNF277Q9NRM2 450 aaPredicted RBP20.19■□□□□ 0.82
SVOP-203ENST00000550436 ZNF541Q9H0D2 1346 aa20.19■□□□□ 0.82
SVOP-203ENST00000550436 DCTN1Q14203 1278 aa20.18■□□□□ 0.82
SVOP-203ENST00000550436 TAF1DQ9H5J8 278 aaPredicted RBP20.18■□□□□ 0.82
SVOP-203ENST00000550436 PASKQ96RG2 1323 aa20.18■□□□□ 0.82
SVOP-203ENST00000550436 FOXN1O15353 648 aa20.17■□□□□ 0.82
SVOP-203ENST00000550436 SCN4AP35499 1836 aa20.16■□□□□ 0.82
SVOP-203ENST00000550436 CCDC93Q567U6 631 aa20.16■□□□□ 0.82
SVOP-203ENST00000550436 NPC1L1Q9UHC9 1359 aa20.16■□□□□ 0.82
SVOP-203ENST00000550436 ITGBL1O95965 494 aaPredicted RBP20.15■□□□□ 0.82
SVOP-203ENST00000550436 NPR1P16066 1061 aa20.15■□□□□ 0.82
SVOP-203ENST00000550436 HLFQ16534 295 aa20.15■□□□□ 0.82
SVOP-203ENST00000550436 EAPPQ56P03 285 aaPredicted RBP20.15■□□□□ 0.82
SVOP-203ENST00000550436 L3MBTL3Q96JM7 780 aaPredicted RBP20.15■□□□□ 0.82
SVOP-203ENST00000550436 NIP7Q9Y221 180 aaKnown RBP eCLIP20.15■□□□□ 0.82
SVOP-203ENST00000550436 CNTNAP1P78357 1384 aa20.15■□□□□ 0.82
SVOP-203ENST00000550436 KLRG2A4D1S0 409 aaPredicted RBP20.14■□□□□ 0.81
SVOP-203ENST00000550436 SNRPA1P09661 255 aaKnown RBP20.14■□□□□ 0.81
SVOP-203ENST00000550436 FKBP4Q02790 459 aaKnown RBP eCLIP20.14■□□□□ 0.81
SVOP-203ENST00000550436 SOGA3Q5TF21 947 aa20.14■□□□□ 0.81
SVOP-203ENST00000550436 CLEC4GQ6UXB4 293 aa20.14■□□□□ 0.81
SVOP-203ENST00000550436 SLC51AQ86UW1 340 aa20.14■□□□□ 0.81
SVOP-203ENST00000550436 LDHDQ86WU2 507 aa20.14■□□□□ 0.81
SVOP-203ENST00000550436 MIS18AQ9NYP9 233 aa20.14■□□□□ 0.81
SVOP-203ENST00000550436 VEGFBP49765 207 aa20.13■□□□□ 0.81
SVOP-203ENST00000550436 IQCA1LA6NCM1 817 aa20.12■□□□□ 0.81
SVOP-203ENST00000550436 CLEC11AQ9Y240 323 aa20.12■□□□□ 0.81
SVOP-203ENST00000550436 RNF123Q5XPI4 1314 aa20.11■□□□□ 0.81
SVOP-203ENST00000550436 U2AF1L5P0DN76 240 aaPredicted RBP20.11■□□□□ 0.81
SVOP-203ENST00000550436 U2AF1Q01081 240 aaKnown RBP eCLIP20.11■□□□□ 0.81
SVOP-203ENST00000550436 TPTE2Q6XPS3 522 aa20.11■□□□□ 0.81
SVOP-203ENST00000550436 SYNE4Q8N205 404 aa20.11■□□□□ 0.81
SVOP-203ENST00000550436 ADAMTSL1Q8N6G6 1762 aa20.11■□□□□ 0.81
SVOP-203ENST00000550436 EPHX2P34913 555 aa20.1■□□□□ 0.81
SVOP-203ENST00000550436 MAP1SQ66K74 1059 aaPredicted RBP20.1■□□□□ 0.81
SVOP-203ENST00000550436 NGEFQ8N5V2 710 aa20.1■□□□□ 0.81
SVOP-203ENST00000550436 HACL1Q9UJ83 578 aa20.1■□□□□ 0.81
SVOP-203ENST00000550436 ZNF652Q9Y2D9 606 aa20.1■□□□□ 0.81
SVOP-203ENST00000550436 COL4A5P29400 1685 aa20.1■□□□□ 0.81
SVOP-203ENST00000550436 TMEM88BA6NKF7 163 aa20.09■□□□□ 0.81
SVOP-203ENST00000550436 NUTM1Q86Y26 1132 aa20.09■□□□□ 0.81
SVOP-203ENST00000550436 RTF1Q92541 710 aaKnown RBP20.09■□□□□ 0.81
SVOP-203ENST00000550436 CFAP53Q96M91 514 aa20.09■□□□□ 0.81
SVOP-203ENST00000550436 ABCC12Q96J65 1359 aa20.08■□□□□ 0.81
SVOP-203ENST00000550436 IARSP41252 1262 aaKnown RBP20.08■□□□□ 0.81
SVOP-203ENST00000550436 FMR1Q06787 632 aaKnown RBP eCLIP20.08■□□□□ 0.81
SVOP-203ENST00000550436 NUP98P52948 1817 aa20.07■□□□□ 0.8
SVOP-203ENST00000550436 FZD9O00144 591 aa20.07■□□□□ 0.8
SVOP-203ENST00000550436 PPP2R1AP30153 589 aa20.07■□□□□ 0.8
SVOP-203ENST00000550436 SNED1Q8TER0 1413 aa20.07■□□□□ 0.8
SVOP-203ENST00000550436 RTKN2Q8IZC4 609 aa20.06■□□□□ 0.8
SVOP-203ENST00000550436 CNTROBQ8N137 903 aa20.06■□□□□ 0.8
SVOP-203ENST00000550436 NUDCQ9Y266 331 aa20.06■□□□□ 0.8
SVOP-203ENST00000550436 LTBP1Q14766 1721 aa20.05■□□□□ 0.8
SVOP-203ENST00000550436 GTF2E1P29083 439 aaPredicted RBP20.05■□□□□ 0.8
SVOP-203ENST00000550436 LBX1P52954 281 aa20.05■□□□□ 0.8
SVOP-203ENST00000550436 TAF7Q15545 349 aaPredicted RBP20.05■□□□□ 0.8
SVOP-203ENST00000550436 TTLL7Q6ZT98 887 aa20.05■□□□□ 0.8
SVOP-203ENST00000550436 PRDM10Q9NQV6 1147 aa20.05■□□□□ 0.8
SVOP-203ENST00000550436 WBP1LQ9NX94 342 aa20.05■□□□□ 0.8
SVOP-203ENST00000550436 DLG5Q8TDM6 1919 aa20.04■□□□□ 0.8
SVOP-203ENST00000550436 ALDH1B1P30837 517 aa20.04■□□□□ 0.8
SVOP-203ENST00000550436 CTCFP49711 727 aaPredicted RBP20.04■□□□□ 0.8
SVOP-203ENST00000550436 GJA3Q9Y6H8 435 aa20.04■□□□□ 0.8
SVOP-203ENST00000550436 LAMB4A4D0S4 1761 aa20.03■□□□□ 0.8
SVOP-203ENST00000550436 TCERG1O14776 1098 aaKnown RBP20.03■□□□□ 0.8
SVOP-203ENST00000550436 GPTP24298 496 aa20.03■□□□□ 0.8
SVOP-203ENST00000550436 RRP7AQ9Y3A4 280 aaKnown RBP20.03■□□□□ 0.8
SVOP-203ENST00000550436 DEFB115Q30KQ5 88 aa20.02■□□□□ 0.8
SVOP-203ENST00000550436 CRY2Q49AN0 593 aa20.02■□□□□ 0.8
SVOP-203ENST00000550436 C3orf67Q6ZVT6 689 aa20.02■□□□□ 0.8
SVOP-203ENST00000550436 GPC2Q8N158 579 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms