RNA–Protein interactions for RNA: ENST00000550339.1

NR4A1-214, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 2

Gene NR4A1, Length 500 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-214ENST00000550339 CACNA1FO60840 1977 aa15.27■□□□□ 0.03
NR4A1-214ENST00000550339 PSDA5PKW4 1024 aaPredicted RBP15.26■□□□□ 0.03
NR4A1-214ENST00000550339 FLIIQ13045 1269 aa15.26■□□□□ 0.03
NR4A1-214ENST00000550339 KIF6Q6ZMV9 814 aa15.26■□□□□ 0.03
NR4A1-214ENST00000550339 FLAD1Q8NFF5 587 aa15.26■□□□□ 0.03
NR4A1-214ENST00000550339 ZBTB3Q9H5J0 574 aa15.26■□□□□ 0.03
NR4A1-214ENST00000550339 SRP68Q9UHB9 627 aaKnown RBP15.26■□□□□ 0.03
NR4A1-214ENST00000550339 ZPR1O75312 459 aa15.25■□□□□ 0.03
NR4A1-214ENST00000550339 FKBP5Q13451 457 aaPredicted RBP15.25■□□□□ 0.03
NR4A1-214ENST00000550339 FRAT1Q92837 279 aaPredicted RBP15.25■□□□□ 0.03
NR4A1-214ENST00000550339 USPL1Q5W0Q7 1092 aa15.24■□□□□ 0.03
NR4A1-214ENST00000550339 ANKRD13DQ6ZTN6 518 aa15.24■□□□□ 0.03
NR4A1-214ENST00000550339 RIC3Q7Z5B4 369 aa15.24■□□□□ 0.03
NR4A1-214ENST00000550339 PDGFDQ9GZP0 370 aaPredicted RBP15.24■□□□□ 0.03
NR4A1-214ENST00000550339 NOB1Q9ULX3 412 aaKnown RBP15.24■□□□□ 0.03
NR4A1-214ENST00000550339 C4AP0C0L4 1744 aa15.23■□□□□ 0.03
NR4A1-214ENST00000550339 MAP3K15Q6ZN16 1313 aa15.23■□□□□ 0.03
NR4A1-214ENST00000550339 CAMTA2O94983 1202 aa15.23■□□□□ 0.03
NR4A1-214ENST00000550339 DDX58O95786 925 aaKnown RBP15.23■□□□□ 0.03
NR4A1-214ENST00000550339 NARFQ9UHQ1 456 aa15.23■□□□□ 0.03
NR4A1-214ENST00000550339 USP42Q9H9J4 1324 aaKnown RBP15.22■□□□□ 0.03
NR4A1-214ENST00000550339 PI4KAP2A4QPH2 592 aa15.22■□□□□ 0.03
NR4A1-214ENST00000550339 HLFQ16534 295 aa15.22■□□□□ 0.03
NR4A1-214ENST00000550339 PI4KAP1Q8N8J0 262 aa15.22■□□□□ 0.03
NR4A1-214ENST00000550339 PLBD2Q8NHP8 589 aa15.22■□□□□ 0.03
NR4A1-214ENST00000550339 MAP3K2Q9Y2U5 619 aa15.22■□□□□ 0.03
NR4A1-214ENST00000550339 QSER1Q2KHR3 1735 aa15.22■□□□□ 0.03
NR4A1-214ENST00000550339 KIF16BQ96L93 1317 aa15.21■□□□□ 0.03
NR4A1-214ENST00000550339 F6X3S4 739 aa15.21■□□□□ 0.03
NR4A1-214ENST00000550339 BRPF1P55201 1214 aaPredicted RBP15.21■□□□□ 0.03
NR4A1-214ENST00000550339 MSL1Q68DK7 614 aa15.21■□□□□ 0.03
NR4A1-214ENST00000550339 KSR2Q6VAB6 950 aa15.21■□□□□ 0.03
NR4A1-214ENST00000550339 ERVV-1B6SEH8 477 aa15.2■□□□□ 0.02
NR4A1-214ENST00000550339 IPO8O15397 1037 aaKnown RBP15.2■□□□□ 0.02
NR4A1-214ENST00000550339 PLIN1O60240 522 aa15.2■□□□□ 0.02
NR4A1-214ENST00000550339 CENPBP07199 599 aaPredicted RBP15.2■□□□□ 0.02
NR4A1-214ENST00000550339 SLC4A10Q6U841 1118 aa15.2■□□□□ 0.02
NR4A1-214ENST00000550339 BICDL1Q6ZP65 573 aa15.2■□□□□ 0.02
NR4A1-214ENST00000550339 BCL2L12Q9HB09 334 aa15.2■□□□□ 0.02
NR4A1-214ENST00000550339 ZNF652Q9Y2D9 606 aa15.2■□□□□ 0.02
NR4A1-214ENST00000550339 ADCY9O60503 1353 aa15.2■□□□□ 0.02
NR4A1-214ENST00000550339 PTPRCP08575 1304 aa15.19■□□□□ 0.02
NR4A1-214ENST00000550339 GYS1P13807 737 aa15.19■□□□□ 0.02
NR4A1-214ENST00000550339 FKBP8Q14318 412 aa15.19■□□□□ 0.02
NR4A1-214ENST00000550339 ZKSCAN2Q63HK3 967 aa15.19■□□□□ 0.02
NR4A1-214ENST00000550339 MYD88Q99836 296 aa15.19■□□□□ 0.02
NR4A1-214ENST00000550339 TNNQ9UQP3 1299 aa15.19■□□□□ 0.02
NR4A1-214ENST00000550339 NUP98P52948 1817 aa15.19■□□□□ 0.02
NR4A1-214ENST00000550339 BCORQ6W2J9 1755 aa15.19■□□□□ 0.02
NR4A1-214ENST00000550339 ARFGEF2Q9Y6D5 1785 aa15.19■□□□□ 0.02
NR4A1-214ENST00000550339 ATP5J2-PTCD1G3V325 749 aa15.18■□□□□ 0.02
NR4A1-214ENST00000550339 ZBTB7AO95365 584 aa15.18■□□□□ 0.02
NR4A1-214ENST00000550339 GPTP24298 496 aa15.18■□□□□ 0.02
NR4A1-214ENST00000550339 TBC1D9BQ66K14 1250 aa15.18■□□□□ 0.02
NR4A1-214ENST00000550339 GIGYF2Q6Y7W6 1299 aaKnown RBP15.18■□□□□ 0.02
NR4A1-214ENST00000550339 DNAAF4Q8WXU2 420 aa15.18■□□□□ 0.02
NR4A1-214ENST00000550339 CLUAP1Q96AJ1 413 aa15.18■□□□□ 0.02
NR4A1-214ENST00000550339 API5Q9BZZ5 524 aaKnown RBP15.18■□□□□ 0.02
NR4A1-214ENST00000550339 SCN7AQ01118 1682 aa15.18■□□□□ 0.02
NR4A1-214ENST00000550339 MYCNP04198 464 aaPredicted RBP15.17■□□□□ 0.02
NR4A1-214ENST00000550339 TRIM27P14373 513 aa15.17■□□□□ 0.02
NR4A1-214ENST00000550339 TCIRG1Q13488 830 aa15.17■□□□□ 0.02
NR4A1-214ENST00000550339 CLEC4GQ6UXB4 293 aa15.17■□□□□ 0.02
NR4A1-214ENST00000550339 ATF7IPQ6VMQ6 1270 aa15.17■□□□□ 0.02
NR4A1-214ENST00000550339 METTL22Q9BUU2 404 aaPredicted RBP15.17■□□□□ 0.02
NR4A1-214ENST00000550339 NIP7Q9Y221 180 aaKnown RBP eCLIP15.17■□□□□ 0.02
NR4A1-214ENST00000550339 ATF5Q9Y2D1 282 aaPredicted RBP15.17■□□□□ 0.02
NR4A1-214ENST00000550339 FAM177BA6PVY3 158 aa15.16■□□□□ 0.02
NR4A1-214ENST00000550339 NEXNQ0ZGT2 675 aa15.16■□□□□ 0.02
NR4A1-214ENST00000550339 HSP90AB3PQ58FF7 597 aa15.16■□□□□ 0.02
NR4A1-214ENST00000550339 NLGN1Q8N2Q7 840 aa15.16■□□□□ 0.02
NR4A1-214ENST00000550339 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.16■□□□□ 0.02
NR4A1-214ENST00000550339 SLC16A10Q8TF71 515 aa15.16■□□□□ 0.02
NR4A1-214ENST00000550339 ARHGAP45Q92619 1136 aa15.16■□□□□ 0.02
NR4A1-214ENST00000550339 RNF39Q9H2S5 420 aa15.16■□□□□ 0.02
NR4A1-214ENST00000550339 SUPT16HQ9Y5B9 1047 aaKnown RBP15.16■□□□□ 0.02
NR4A1-214ENST00000550339 CASZ1Q86V15 1759 aa15.16■□□□□ 0.02
NR4A1-214ENST00000550339 NFIXQ14938 502 aa15.15■□□□□ 0.02
NR4A1-214ENST00000550339 SETDB2Q96T68 719 aa15.15■□□□□ 0.02
NR4A1-214ENST00000550339 U3KPZ7 1027 aaPredicted RBP15.15■□□□□ 0.02
NR4A1-214ENST00000550339 RRP1P56182 461 aaKnown RBP15.14■□□□□ 0.01
NR4A1-214ENST00000550339 CWF19L2Q2TBE0 894 aaKnown RBP15.14■□□□□ 0.01
NR4A1-214ENST00000550339 FTSJ3Q8IY81 847 aaKnown RBP15.14■□□□□ 0.01
NR4A1-214ENST00000550339 ZNF34Q8IZ26 560 aa15.14■□□□□ 0.01
NR4A1-214ENST00000550339 MTFR1LQ9H019 292 aa15.14■□□□□ 0.01
NR4A1-214ENST00000550339 RGL2O15211 777 aa15.13■□□□□ 0.01
NR4A1-214ENST00000550339 MMP10P09238 476 aa15.13■□□□□ 0.01
NR4A1-214ENST00000550339 BEND3Q5T5X7 828 aa15.13■□□□□ 0.01
NR4A1-214ENST00000550339 DZIP1LQ8IYY4 767 aaKnown RBP15.13■□□□□ 0.01
NR4A1-214ENST00000550339 PANK1Q8TE04 598 aa15.13■□□□□ 0.01
NR4A1-214ENST00000550339 ISCA1Q9BUE6 129 aa15.13■□□□□ 0.01
NR4A1-214ENST00000550339 ANKRD36CQ5JPF3 1778 aa15.13■□□□□ 0.01
NR4A1-214ENST00000550339 UBN2Q6ZU65 1347 aa15.13■□□□□ 0.01
NR4A1-214ENST00000550339 AFDNP55196 1824 aaKnown RBP15.13■□□□□ 0.01
NR4A1-214ENST00000550339 ATP10DQ9P241 1426 aa15.12■□□□□ 0.01
NR4A1-214ENST00000550339 NPHP1O15259 732 aa15.12■□□□□ 0.01
NR4A1-214ENST00000550339 IGKV5-2P06315 115 aa15.12■□□□□ 0.01
NR4A1-214ENST00000550339 RLBP1P12271 317 aa15.12■□□□□ 0.01
NR4A1-214ENST00000550339 TM4SF1P30408 202 aa15.12■□□□□ 0.01
NR4A1-214ENST00000550339 NLRP10Q86W26 655 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms