RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 PRELPP51888 382 aa17.71■□□□□ 0.43
NUP188-211ENST00000550219 TAF7Q15545 349 aaPredicted RBP17.71■□□□□ 0.43
NUP188-211ENST00000550219 THUMPD2Q9BTF0 503 aaKnown RBP17.71■□□□□ 0.43
NUP188-211ENST00000550219 RRAGCQ9HB90 399 aa17.71■□□□□ 0.43
NUP188-211ENST00000550219 ZNF652Q9Y2D9 606 aa17.71■□□□□ 0.43
NUP188-211ENST00000550219 C21orf2O43822 256 aa17.7■□□□□ 0.42
NUP188-211ENST00000550219 NBPF5PQ86XG9 351 aaPredicted RBP17.7■□□□□ 0.42
NUP188-211ENST00000550219 FAM177BA6PVY3 158 aa17.69■□□□□ 0.42
NUP188-211ENST00000550219 NBPF26B4DH59 902 aa17.69■□□□□ 0.42
NUP188-211ENST00000550219 APLP1P51693 650 aa17.69■□□□□ 0.42
NUP188-211ENST00000550219 NFE2L2Q16236 605 aa17.69■□□□□ 0.42
NUP188-211ENST00000550219 NBPF10Q6P3W6 841 aaKnown RBP17.69■□□□□ 0.42
NUP188-211ENST00000550219 NBPF15Q8N660 670 aa17.69■□□□□ 0.42
NUP188-211ENST00000550219 RBM46Q8TBY0 533 aaKnown RBP17.69■□□□□ 0.42
NUP188-211ENST00000550219 PDZRN3Q9UPQ7 1066 aa17.69■□□□□ 0.42
NUP188-211ENST00000550219 ZC3H4Q9UPT8 1303 aaKnown RBP17.69■□□□□ 0.42
NUP188-211ENST00000550219 MIER1Q8N108 512 aa17.68■□□□□ 0.42
NUP188-211ENST00000550219 NGEFQ8N5V2 710 aa17.68■□□□□ 0.42
NUP188-211ENST00000550219 WDR90Q96KV7 1748 aa17.68■□□□□ 0.42
NUP188-211ENST00000550219 PLEKHF1Q96S99 279 aa17.68■□□□□ 0.42
NUP188-211ENST00000550219 ARFGEF2Q9Y6D5 1785 aa17.67■□□□□ 0.42
NUP188-211ENST00000550219 NIP7Q9Y221 180 aaKnown RBP eCLIP17.67■□□□□ 0.42
NUP188-211ENST00000550219 CCDC88AQ3V6T2 1871 aa17.67■□□□□ 0.42
NUP188-211ENST00000550219 PRPF40BQ6NWY9 871 aaKnown RBP17.66■□□□□ 0.42
NUP188-211ENST00000550219 CLEC4GQ6UXB4 293 aa17.66■□□□□ 0.42
NUP188-211ENST00000550219 PNISRQ8TF01 805 aaKnown RBP17.66■□□□□ 0.42
NUP188-211ENST00000550219 CNKSR1Q969H4 720 aa17.66■□□□□ 0.42
NUP188-211ENST00000550219 SRGNP10124 158 aa17.65■□□□□ 0.42
NUP188-211ENST00000550219 STYK1Q6J9G0 422 aa17.65■□□□□ 0.42
NUP188-211ENST00000550219 MASTLQ96GX5 879 aa17.65■□□□□ 0.42
NUP188-211ENST00000550219 SLX4Q8IY92 1834 aa17.65■□□□□ 0.42
NUP188-211ENST00000550219 FER1L6Q2WGJ9 1857 aa17.65■□□□□ 0.42
NUP188-211ENST00000550219 GLTPD2A6NH11 291 aa17.64■□□□□ 0.41
NUP188-211ENST00000550219 CCER2I3L3R5 266 aa17.64■□□□□ 0.41
NUP188-211ENST00000550219 HLFQ16534 295 aa17.64■□□□□ 0.41
NUP188-211ENST00000550219 TAOK3Q9H2K8 898 aa17.64■□□□□ 0.41
NUP188-211ENST00000550219 PNNQ9H307 717 aaKnown RBP17.64■□□□□ 0.41
NUP188-211ENST00000550219 RRP7AQ9Y3A4 280 aaKnown RBP17.64■□□□□ 0.41
NUP188-211ENST00000550219 CEP350Q5VT06 3117 aa17.64■□□□□ 0.41
NUP188-211ENST00000550219 MYL6BP14649 208 aa17.63■□□□□ 0.41
NUP188-211ENST00000550219 EIF4A1P60842 406 aaKnown RBP17.63■□□□□ 0.41
NUP188-211ENST00000550219 HTRA3P83110 453 aa17.63■□□□□ 0.41
NUP188-211ENST00000550219 FSTL1Q12841 308 aa17.63■□□□□ 0.41
NUP188-211ENST00000550219 ERFEQ4G0M1 354 aa17.63■□□□□ 0.41
NUP188-211ENST00000550219 GTF2E1P29083 439 aaPredicted RBP17.62■□□□□ 0.41
NUP188-211ENST00000550219 TPTE2Q6XPS3 522 aa17.62■□□□□ 0.41
NUP188-211ENST00000550219 KIF6Q6ZMV9 814 aa17.62■□□□□ 0.41
NUP188-211ENST00000550219 SMC1BQ8NDV3 1235 aa17.62■□□□□ 0.41
NUP188-211ENST00000550219 TSPYL4Q9UJ04 414 aa17.62■□□□□ 0.41
NUP188-211ENST00000550219 ABCC12Q96J65 1359 aa17.61■□□□□ 0.41
NUP188-211ENST00000550219 VEGFAP15692 232 aaPredicted RBP17.6■□□□□ 0.41
NUP188-211ENST00000550219 NPR1P16066 1061 aa17.6■□□□□ 0.41
NUP188-211ENST00000550219 CCDC184Q52MB2 194 aa17.6■□□□□ 0.41
NUP188-211ENST00000550219 SOGA3Q5TF21 947 aa17.6■□□□□ 0.41
NUP188-211ENST00000550219 TTLL7Q6ZT98 887 aa17.6■□□□□ 0.41
NUP188-211ENST00000550219 ZBTB3Q9H5J0 574 aa17.6■□□□□ 0.41
NUP188-211ENST00000550219 MAP3K15Q6ZN16 1313 aa17.6■□□□□ 0.41
NUP188-211ENST00000550219 LTBP3Q9NS15 1303 aa17.6■□□□□ 0.41
NUP188-211ENST00000550219 DICER1Q9UPY3 1922 aaKnown RBP17.59■□□□□ 0.41
NUP188-211ENST00000550219 GPTP24298 496 aa17.59■□□□□ 0.41
NUP188-211ENST00000550219 RIPK4P57078 832 aa17.59■□□□□ 0.41
NUP188-211ENST00000550219 CCDC93Q567U6 631 aa17.59■□□□□ 0.41
NUP188-211ENST00000550219 DPY19L2Q6NUT2 758 aa17.59■□□□□ 0.41
NUP188-211ENST00000550219 NUTM1Q86Y26 1132 aa17.59■□□□□ 0.41
NUP188-211ENST00000550219 RGL2O15211 777 aa17.58■□□□□ 0.4
NUP188-211ENST00000550219 CCDC146Q8IYE0 955 aa17.58■□□□□ 0.4
NUP188-211ENST00000550219 NUP98P52948 1817 aa17.57■□□□□ 0.4
NUP188-211ENST00000550219 EIF2S2P20042 333 aaKnown RBP17.57■□□□□ 0.4
NUP188-211ENST00000550219 OLFM4Q6UX06 510 aa17.57■□□□□ 0.4
NUP188-211ENST00000550219 NYXQ9GZU5 481 aa17.57■□□□□ 0.4
NUP188-211ENST00000550219 UBN2Q6ZU65 1347 aa17.56■□□□□ 0.4
NUP188-211ENST00000550219 ERVV-1B6SEH8 477 aa17.56■□□□□ 0.4
NUP188-211ENST00000550219 LMOD3Q0VAK6 560 aa17.56■□□□□ 0.4
NUP188-211ENST00000550219 NEUROD2Q15784 382 aa17.56■□□□□ 0.4
NUP188-211ENST00000550219 DNAJC5GQ8N7S2 189 aa17.56■□□□□ 0.4
NUP188-211ENST00000550219 DDNO94850 711 aaPredicted RBP17.55■□□□□ 0.4
NUP188-211ENST00000550219 TMPOP42166 694 aaKnown RBP17.55■□□□□ 0.4
NUP188-211ENST00000550219 MRS2Q9HD23 443 aa17.55■□□□□ 0.4
NUP188-211ENST00000550219 ZNF277Q9NRM2 450 aaPredicted RBP17.55■□□□□ 0.4
NUP188-211ENST00000550219 ERBB4Q15303 1308 aa17.54■□□□□ 0.4
NUP188-211ENST00000550219 KLRG2A4D1S0 409 aaPredicted RBP17.54■□□□□ 0.4
NUP188-211ENST00000550219 POTECB2RU33 542 aa17.54■□□□□ 0.4
NUP188-211ENST00000550219 ANXA1P04083 346 aa17.54■□□□□ 0.4
NUP188-211ENST00000550219 FKBP4Q02790 459 aaKnown RBP eCLIP17.54■□□□□ 0.4
NUP188-211ENST00000550219 WDR43Q15061 677 aaKnown RBP eCLIP17.54■□□□□ 0.4
NUP188-211ENST00000550219 C7orf43Q8WVR3 580 aa17.54■□□□□ 0.4
NUP188-211ENST00000550219 NECTIN2Q92692 538 aa17.54■□□□□ 0.4
NUP188-211ENST00000550219 RPGRQ92834 1020 aaKnown RBP17.54■□□□□ 0.4
NUP188-211ENST00000550219 KLRG1Q96E93 195 aa17.54■□□□□ 0.4
NUP188-211ENST00000550219 IBTKQ9P2D0 1353 aaPredicted RBP17.53■□□□□ 0.4
NUP188-211ENST00000550219 LAS1LQ9Y4W2 734 aaKnown RBP17.53■□□□□ 0.4
NUP188-211ENST00000550219 ALDH1B1P30837 517 aa17.52■□□□□ 0.4
NUP188-211ENST00000550219 PROSER3Q2NL68 480 aa17.52■□□□□ 0.4
NUP188-211ENST00000550219 SUSD4Q5VX71 490 aa17.52■□□□□ 0.4
NUP188-211ENST00000550219 ZNF541Q9H0D2 1346 aa17.51■□□□□ 0.39
NUP188-211ENST00000550219 RIC1Q4ADV7 1423 aa17.51■□□□□ 0.39
NUP188-211ENST00000550219 GIGYF2Q6Y7W6 1299 aaKnown RBP17.51■□□□□ 0.39
NUP188-211ENST00000550219 NTSR2O95665 410 aa17.5■□□□□ 0.39
NUP188-211ENST00000550219 POTEIP0CG38 1075 aa17.5■□□□□ 0.39
NUP188-211ENST00000550219 POTEJP0CG39 1038 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms