RNA–Protein interactions for RNA: ENST00000550205.1

PXN-216, Transcript of paxillin, humanhuman

TSL 4

Gene PXN, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-216ENST00000550205 U2AF1L5P0DN76 240 aaPredicted RBP12.98□□□□□ -0.33
PXN-216ENST00000550205 ST5P78524 1137 aa12.98□□□□□ -0.33
PXN-216ENST00000550205 U2AF1Q01081 240 aaKnown RBP eCLIP12.98□□□□□ -0.33
PXN-216ENST00000550205 MCM10Q7L590 875 aa12.98□□□□□ -0.33
PXN-216ENST00000550205 CCDC24Q8N4L8 307 aa12.98□□□□□ -0.33
PXN-216ENST00000550205 RTF1Q92541 710 aaKnown RBP12.98□□□□□ -0.33
PXN-216ENST00000550205 CNKSR1Q969H4 720 aa12.98□□□□□ -0.33
PXN-216ENST00000550205 ARFGEF2Q9Y6D5 1785 aa12.97□□□□□ -0.33
PXN-216ENST00000550205 PRAMEF22A3QJZ6 481 aa12.97□□□□□ -0.33
PXN-216ENST00000550205 KLRG2A4D1S0 409 aaPredicted RBP12.97□□□□□ -0.33
PXN-216ENST00000550205 SOGA3Q5TF21 947 aa12.97□□□□□ -0.33
PXN-216ENST00000550205 DPY19L2Q6NUT2 758 aa12.97□□□□□ -0.33
PXN-216ENST00000550205 MASTLQ96GX5 879 aa12.97□□□□□ -0.33
PXN-216ENST00000550205 TAOK3Q9H2K8 898 aa12.97□□□□□ -0.33
PXN-216ENST00000550205 CCDC88AQ3V6T2 1871 aa12.97□□□□□ -0.33
PXN-216ENST00000550205 DICER1Q9UPY3 1922 aaKnown RBP12.96□□□□□ -0.33
PXN-216ENST00000550205 NBPF26B4DH59 902 aa12.96□□□□□ -0.33
PXN-216ENST00000550205 ERFEQ4G0M1 354 aa12.96□□□□□ -0.33
PXN-216ENST00000550205 PRPF40BQ6NWY9 871 aaKnown RBP12.96□□□□□ -0.33
PXN-216ENST00000550205 NBPF10Q6P3W6 841 aaKnown RBP12.96□□□□□ -0.33
PXN-216ENST00000550205 NBPF15Q8N660 670 aa12.96□□□□□ -0.33
PXN-216ENST00000550205 ZNF652Q9Y2D9 606 aa12.96□□□□□ -0.33
PXN-216ENST00000550205 SLX4Q8IY92 1834 aa12.95□□□□□ -0.34
PXN-216ENST00000550205 PIP4K2AP48426 406 aaPredicted RBP12.95□□□□□ -0.34
PXN-216ENST00000550205 NBPF5PQ86XG9 351 aaPredicted RBP12.95□□□□□ -0.34
PXN-216ENST00000550205 C7orf43Q8WVR3 580 aa12.95□□□□□ -0.34
PXN-216ENST00000550205 NPHP1O15259 732 aa12.94□□□□□ -0.34
PXN-216ENST00000550205 DCTN1Q14203 1278 aa12.94□□□□□ -0.34
PXN-216ENST00000550205 TAF7Q15545 349 aaPredicted RBP12.94□□□□□ -0.34
PXN-216ENST00000550205 NPR1P16066 1061 aa12.93□□□□□ -0.34
PXN-216ENST00000550205 TPTE2Q6XPS3 522 aa12.93□□□□□ -0.34
PXN-216ENST00000550205 ZNF219Q9P2Y4 722 aaPredicted RBP12.93□□□□□ -0.34
PXN-216ENST00000550205 LAMB4A4D0S4 1761 aa12.92□□□□□ -0.34
PXN-216ENST00000550205 NIP7Q9Y221 180 aaKnown RBP eCLIP12.92□□□□□ -0.34
PXN-216ENST00000550205 DDNO94850 711 aaPredicted RBP12.91□□□□□ -0.34
PXN-216ENST00000550205 CCDC93Q567U6 631 aa12.91□□□□□ -0.34
PXN-216ENST00000550205 PNISRQ8TF01 805 aaKnown RBP12.91□□□□□ -0.34
PXN-216ENST00000550205 PLEKHF1Q96S99 279 aa12.91□□□□□ -0.34
PXN-216ENST00000550205 KDM3BQ7LBC6 1761 aa12.91□□□□□ -0.34
PXN-216ENST00000550205 FKBP4Q02790 459 aaKnown RBP eCLIP12.9□□□□□ -0.34
PXN-216ENST00000550205 HLFQ16534 295 aa12.9□□□□□ -0.34
PXN-216ENST00000550205 COL13A1Q5TAT6 717 aaPredicted RBP12.9□□□□□ -0.34
PXN-216ENST00000550205 CHADLQ6NUI6 762 aa12.9□□□□□ -0.34
PXN-216ENST00000550205 L3MBTL3Q96JM7 780 aaPredicted RBP12.9□□□□□ -0.34
PXN-216ENST00000550205 MIS18AQ9NYP9 233 aa12.9□□□□□ -0.34
PXN-216ENST00000550205 CACNA1SQ13698 1873 aa12.9□□□□□ -0.34
PXN-216ENST00000550205 IQCA1LA6NCM1 817 aa12.89□□□□□ -0.35
PXN-216ENST00000550205 ERVV-1B6SEH8 477 aa12.89□□□□□ -0.35
PXN-216ENST00000550205 ALDH1B1P30837 517 aa12.89□□□□□ -0.35
PXN-216ENST00000550205 CRY2Q49AN0 593 aa12.89□□□□□ -0.35
PXN-216ENST00000550205 RTKN2Q8IZC4 609 aa12.89□□□□□ -0.35
PXN-216ENST00000550205 SNED1Q8TER0 1413 aa12.88□□□□□ -0.35
PXN-216ENST00000550205 NEFMP07197 916 aa12.88□□□□□ -0.35
PXN-216ENST00000550205 EIF4A1P60842 406 aaKnown RBP12.88□□□□□ -0.35
PXN-216ENST00000550205 CREBZFQ9NS37 354 aa12.88□□□□□ -0.35
PXN-216ENST00000550205 IBTKQ9P2D0 1353 aaPredicted RBP12.88□□□□□ -0.35
PXN-216ENST00000550205 DLG5Q8TDM6 1919 aa12.88□□□□□ -0.35
PXN-216ENST00000550205 SCN4AP35499 1836 aa12.88□□□□□ -0.35
PXN-216ENST00000550205 RIC1Q4ADV7 1423 aa12.88□□□□□ -0.35
PXN-216ENST00000550205 POTEIP0CG38 1075 aa12.87□□□□□ -0.35
PXN-216ENST00000550205 POTEJP0CG39 1038 aa12.87□□□□□ -0.35
PXN-216ENST00000550205 NFE2L2Q16236 605 aa12.87□□□□□ -0.35
PXN-216ENST00000550205 NYXQ9GZU5 481 aa12.87□□□□□ -0.35
PXN-216ENST00000550205 MAP3K15Q6ZN16 1313 aa12.87□□□□□ -0.35
PXN-216ENST00000550205 PASKQ96RG2 1323 aa12.87□□□□□ -0.35
PXN-216ENST00000550205 FZD9O00144 591 aa12.86□□□□□ -0.35
PXN-216ENST00000550205 OLFM4Q6UX06 510 aa12.86□□□□□ -0.35
PXN-216ENST00000550205 LDHDQ86WU2 507 aa12.86□□□□□ -0.35
PXN-216ENST00000550205 PSMD1Q99460 953 aa12.86□□□□□ -0.35
PXN-216ENST00000550205 PNNQ9H307 717 aaKnown RBP12.86□□□□□ -0.35
PXN-216ENST00000550205 TAF1DQ9H5J8 278 aaPredicted RBP12.86□□□□□ -0.35
PXN-216ENST00000550205 ZNF277Q9NRM2 450 aaPredicted RBP12.86□□□□□ -0.35
PXN-216ENST00000550205 ABCC12Q96J65 1359 aa12.85□□□□□ -0.35
PXN-216ENST00000550205 ADAMTSL1Q8N6G6 1762 aa12.85□□□□□ -0.35
PXN-216ENST00000550205 FAM177BA6PVY3 158 aa12.85□□□□□ -0.35
PXN-216ENST00000550205 GTF2E1P29083 439 aaPredicted RBP12.85□□□□□ -0.35
PXN-216ENST00000550205 HOXA10P31260 410 aaPredicted RBP12.85□□□□□ -0.35
PXN-216ENST00000550205 IARSP41252 1262 aaKnown RBP12.85□□□□□ -0.35
PXN-216ENST00000550205 KIF6Q6ZMV9 814 aa12.85□□□□□ -0.35
PXN-216ENST00000550205 ERBB4Q15303 1308 aa12.85□□□□□ -0.35
PXN-216ENST00000550205 ZNF541Q9H0D2 1346 aa12.85□□□□□ -0.35
PXN-216ENST00000550205 NUP98P52948 1817 aa12.84□□□□□ -0.35
PXN-216ENST00000550205 HSPA1AP0DMV8 641 aaKnown RBP12.84□□□□□ -0.35
PXN-216ENST00000550205 HSPA1BP0DMV9 641 aaKnown RBP12.84□□□□□ -0.35
PXN-216ENST00000550205 GRIPAP1Q4V328 841 aa12.84□□□□□ -0.35
PXN-216ENST00000550205 CC2D2BQ6DHV5 1058 aa12.84□□□□□ -0.35
PXN-216ENST00000550205 TTLL7Q6ZT98 887 aa12.84□□□□□ -0.35
PXN-216ENST00000550205 NUTM1Q86Y26 1132 aa12.84□□□□□ -0.35
PXN-216ENST00000550205 ZNF34Q8IZ26 560 aa12.84□□□□□ -0.35
PXN-216ENST00000550205 SYNE4Q8N205 404 aa12.84□□□□□ -0.35
PXN-216ENST00000550205 UBN2Q6ZU65 1347 aa12.84□□□□□ -0.35
PXN-216ENST00000550205 ITGBL1O95965 494 aaPredicted RBP12.83□□□□□ -0.36
PXN-216ENST00000550205 LRP10Q7Z4F1 713 aa12.83□□□□□ -0.36
PXN-216ENST00000550205 GPC2Q8N158 579 aa12.83□□□□□ -0.36
PXN-216ENST00000550205 NGEFQ8N5V2 710 aa12.83□□□□□ -0.36
PXN-216ENST00000550205 THUMPD2Q9BTF0 503 aaKnown RBP12.83□□□□□ -0.36
PXN-216ENST00000550205 HACL1Q9UJ83 578 aa12.83□□□□□ -0.36
PXN-216ENST00000550205 RRP7AQ9Y3A4 280 aaKnown RBP12.83□□□□□ -0.36
PXN-216ENST00000550205 MAPK8IP3Q9UPT6 1336 aa12.83□□□□□ -0.36
PXN-216ENST00000550205 CNTNAP1P78357 1384 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms