RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 U2AF1L5P0DN76 240 aaPredicted RBP18.12■□□□□ 0.49
TROAP-211ENST00000549891 U2AF1Q01081 240 aaKnown RBP eCLIP18.12■□□□□ 0.49
TROAP-211ENST00000549891 ERFEQ4G0M1 354 aa18.12■□□□□ 0.49
TROAP-211ENST00000549891 STYK1Q6J9G0 422 aa18.12■□□□□ 0.49
TROAP-211ENST00000549891 CLEC4GQ6UXB4 293 aa18.12■□□□□ 0.49
TROAP-211ENST00000549891 CCDC24Q8N4L8 307 aa18.12■□□□□ 0.49
TROAP-211ENST00000549891 TAOK3Q9H2K8 898 aa18.12■□□□□ 0.49
TROAP-211ENST00000549891 LTBP3Q9NS15 1303 aa18.12■□□□□ 0.49
TROAP-211ENST00000549891 KCNQ3O43525 872 aa18.11■□□□□ 0.49
TROAP-211ENST00000549891 SNRPA1P09661 255 aaKnown RBP18.11■□□□□ 0.49
TROAP-211ENST00000549891 MASTLQ96GX5 879 aa18.11■□□□□ 0.49
TROAP-211ENST00000549891 ZNF219Q9P2Y4 722 aaPredicted RBP18.11■□□□□ 0.49
TROAP-211ENST00000549891 USP16Q9Y5T5 823 aa18.11■□□□□ 0.49
TROAP-211ENST00000549891 HTATSF1O43719 755 aaKnown RBP18.1■□□□□ 0.49
TROAP-211ENST00000549891 SRGNP10124 158 aa18.1■□□□□ 0.49
TROAP-211ENST00000549891 RGL2O15211 777 aa18.09■□□□□ 0.49
TROAP-211ENST00000549891 PRPF40BQ6NWY9 871 aaKnown RBP18.09■□□□□ 0.49
TROAP-211ENST00000549891 NBPF5PQ86XG9 351 aaPredicted RBP18.09■□□□□ 0.49
TROAP-211ENST00000549891 PPP2R1AP30153 589 aa18.08■□□□□ 0.48
TROAP-211ENST00000549891 MCM10Q7L590 875 aa18.08■□□□□ 0.48
TROAP-211ENST00000549891 PCNTO95613 3336 aa18.08■□□□□ 0.48
TROAP-211ENST00000549891 NEFMP07197 916 aa18.07■□□□□ 0.48
TROAP-211ENST00000549891 LAMB4A4D0S4 1761 aa18.07■□□□□ 0.48
TROAP-211ENST00000549891 POTECB2RU33 542 aa18.06■□□□□ 0.48
TROAP-211ENST00000549891 PIP4K2AP48426 406 aaPredicted RBP18.06■□□□□ 0.48
TROAP-211ENST00000549891 TPTE2Q6XPS3 522 aa18.06■□□□□ 0.48
TROAP-211ENST00000549891 SCN4AP35499 1836 aa18.05■□□□□ 0.48
TROAP-211ENST00000549891 PRAMEF22A3QJZ6 481 aa18.05■□□□□ 0.48
TROAP-211ENST00000549891 NPR1P16066 1061 aa18.05■□□□□ 0.48
TROAP-211ENST00000549891 TAF7Q15545 349 aaPredicted RBP18.05■□□□□ 0.48
TROAP-211ENST00000549891 DLG5Q8TDM6 1919 aa18.05■□□□□ 0.48
TROAP-211ENST00000549891 CCDC93Q567U6 631 aa18.04■□□□□ 0.48
TROAP-211ENST00000549891 NIP7Q9Y221 180 aaKnown RBP eCLIP18.04■□□□□ 0.48
TROAP-211ENST00000549891 IQCA1LA6NCM1 817 aa18.03■□□□□ 0.48
TROAP-211ENST00000549891 DCTN1Q14203 1278 aa18.03■□□□□ 0.48
TROAP-211ENST00000549891 CHADLQ6NUI6 762 aa18.03■□□□□ 0.48
TROAP-211ENST00000549891 KLRG2A4D1S0 409 aaPredicted RBP18.02■□□□□ 0.48
TROAP-211ENST00000549891 DDNO94850 711 aaPredicted RBP18.02■□□□□ 0.48
TROAP-211ENST00000549891 PNISRQ8TF01 805 aaKnown RBP18.02■□□□□ 0.48
TROAP-211ENST00000549891 NUP98P52948 1817 aa18.02■□□□□ 0.47
TROAP-211ENST00000549891 NBPF26B4DH59 902 aa18.01■□□□□ 0.47
TROAP-211ENST00000549891 GTF2E1P29083 439 aaPredicted RBP18.01■□□□□ 0.47
TROAP-211ENST00000549891 ALDH1B1P30837 517 aa18.01■□□□□ 0.47
TROAP-211ENST00000549891 COL13A1Q5TAT6 717 aaPredicted RBP18.01■□□□□ 0.47
TROAP-211ENST00000549891 NBPF10Q6P3W6 841 aaKnown RBP18.01■□□□□ 0.47
TROAP-211ENST00000549891 NBPF15Q8N660 670 aa18.01■□□□□ 0.47
TROAP-211ENST00000549891 C7orf43Q8WVR3 580 aa18.01■□□□□ 0.47
TROAP-211ENST00000549891 KDM3BQ7LBC6 1761 aa18.01■□□□□ 0.47
TROAP-211ENST00000549891 FKBP4Q02790 459 aaKnown RBP eCLIP18■□□□□ 0.47
TROAP-211ENST00000549891 RTKN2Q8IZC4 609 aa18■□□□□ 0.47
TROAP-211ENST00000549891 CREBZFQ9NS37 354 aa18■□□□□ 0.47
TROAP-211ENST00000549891 L3MBTL3Q96JM7 780 aaPredicted RBP17.99■□□□□ 0.47
TROAP-211ENST00000549891 NYXQ9GZU5 481 aa17.99■□□□□ 0.47
TROAP-211ENST00000549891 FAM177BA6PVY3 158 aa17.98■□□□□ 0.47
TROAP-211ENST00000549891 ERVV-1B6SEH8 477 aa17.97■□□□□ 0.47
TROAP-211ENST00000549891 HSPA1AP0DMV8 641 aaKnown RBP17.97■□□□□ 0.47
TROAP-211ENST00000549891 HSPA1BP0DMV9 641 aaKnown RBP17.97■□□□□ 0.47
TROAP-211ENST00000549891 HLFQ16534 295 aa17.97■□□□□ 0.47
TROAP-211ENST00000549891 LDHDQ86WU2 507 aa17.97■□□□□ 0.47
TROAP-211ENST00000549891 TNS4Q8IZW8 715 aa17.97■□□□□ 0.47
TROAP-211ENST00000549891 PNNQ9H307 717 aaKnown RBP17.97■□□□□ 0.47
TROAP-211ENST00000549891 MIS18AQ9NYP9 233 aa17.97■□□□□ 0.47
TROAP-211ENST00000549891 KIF6Q6ZMV9 814 aa17.96■□□□□ 0.47
TROAP-211ENST00000549891 ZNF277Q9NRM2 450 aaPredicted RBP17.96■□□□□ 0.47
TROAP-211ENST00000549891 POTEIP0CG38 1075 aa17.95■□□□□ 0.46
TROAP-211ENST00000549891 POTEJP0CG39 1038 aa17.95■□□□□ 0.46
TROAP-211ENST00000549891 NGEFQ8N5V2 710 aa17.95■□□□□ 0.46
TROAP-211ENST00000549891 TAF1DQ9H5J8 278 aaPredicted RBP17.95■□□□□ 0.46
TROAP-211ENST00000549891 MAP3K15Q6ZN16 1313 aa17.95■□□□□ 0.46
TROAP-211ENST00000549891 IARSP41252 1262 aaKnown RBP17.94■□□□□ 0.46
TROAP-211ENST00000549891 CC2D2BQ6DHV5 1058 aa17.94■□□□□ 0.46
TROAP-211ENST00000549891 HACL1Q9UJ83 578 aa17.94■□□□□ 0.46
TROAP-211ENST00000549891 IBTKQ9P2D0 1353 aaPredicted RBP17.93■□□□□ 0.46
TROAP-211ENST00000549891 EIF4A1P60842 406 aaKnown RBP17.93■□□□□ 0.46
TROAP-211ENST00000549891 NFE2L2Q16236 605 aa17.93■□□□□ 0.46
TROAP-211ENST00000549891 CRY2Q49AN0 593 aa17.93■□□□□ 0.46
TROAP-211ENST00000549891 GRIPAP1Q4V328 841 aa17.93■□□□□ 0.46
TROAP-211ENST00000549891 PSMD1Q99460 953 aa17.93■□□□□ 0.46
TROAP-211ENST00000549891 RRP7AQ9Y3A4 280 aaKnown RBP17.93■□□□□ 0.46
TROAP-211ENST00000549891 MAPK8IP3Q9UPT6 1336 aa17.93■□□□□ 0.46
TROAP-211ENST00000549891 RIC1Q4ADV7 1423 aa17.92■□□□□ 0.46
TROAP-211ENST00000549891 EAPPQ56P03 285 aaPredicted RBP17.92■□□□□ 0.46
TROAP-211ENST00000549891 OLFM4Q6UX06 510 aa17.92■□□□□ 0.46
TROAP-211ENST00000549891 PNMA8AQ86V59 439 aaPredicted RBP17.92■□□□□ 0.46
TROAP-211ENST00000549891 SYNE4Q8N205 404 aa17.92■□□□□ 0.46
TROAP-211ENST00000549891 JDP2Q8WYK2 163 aa17.92■□□□□ 0.46
TROAP-211ENST00000549891 RPGRQ92834 1020 aaKnown RBP17.92■□□□□ 0.46
TROAP-211ENST00000549891 PLEKHF1Q96S99 279 aa17.92■□□□□ 0.46
TROAP-211ENST00000549891 MKRN1Q9UHC7 482 aaKnown RBP17.92■□□□□ 0.46
TROAP-211ENST00000549891 PASKQ96RG2 1323 aa17.92■□□□□ 0.46
TROAP-211ENST00000549891 ZNF541Q9H0D2 1346 aa17.92■□□□□ 0.46
TROAP-211ENST00000549891 FZD9O00144 591 aa17.91■□□□□ 0.46
TROAP-211ENST00000549891 MYL6BP14649 208 aa17.91■□□□□ 0.46
TROAP-211ENST00000549891 NUTM1Q86Y26 1132 aa17.91■□□□□ 0.46
TROAP-211ENST00000549891 CLEC11AQ9Y240 323 aa17.91■□□□□ 0.46
TROAP-211ENST00000549891 ERBB4Q15303 1308 aa17.91■□□□□ 0.46
TROAP-211ENST00000549891 ABCC12Q96J65 1359 aa17.91■□□□□ 0.46
TROAP-211ENST00000549891 ADAMTSL1Q8N6G6 1762 aa17.9■□□□□ 0.46
TROAP-211ENST00000549891 EPHX2P34913 555 aa17.9■□□□□ 0.46
TROAP-211ENST00000549891 GPC2Q8N158 579 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms