RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 ZBTB7BO15156 539 aaPredicted RBP9.77□□□□□ -0.85
CCDC38-208ENST00000549876 SIN3BO75182 1162 aa9.77□□□□□ -0.85
CCDC38-208ENST00000549876 ITGB7P26010 798 aa9.77□□□□□ -0.85
CCDC38-208ENST00000549876 SH3PXD2AQ5TCZ1 1133 aa9.77□□□□□ -0.85
CCDC38-208ENST00000549876 ADARB2-AS1A8MUL3 147 aa9.76□□□□□ -0.85
CCDC38-208ENST00000549876 SPATA31C1P0DKV0 1188 aa9.76□□□□□ -0.85
CCDC38-208ENST00000549876 SFSWAPQ12872 951 aaKnown RBP9.76□□□□□ -0.85
CCDC38-208ENST00000549876 Q8N3U1 123 aa9.76□□□□□ -0.85
CCDC38-208ENST00000549876 ZNF232Q9UNY5 417 aa9.76□□□□□ -0.85
CCDC38-208ENST00000549876 KIAA1024Q9UPX6 916 aa9.76□□□□□ -0.85
CCDC38-208ENST00000549876 SERTM1A2A2V5 107 aa9.75□□□□□ -0.85
CCDC38-208ENST00000549876 ALAS2P22557 587 aa9.75□□□□□ -0.85
CCDC38-208ENST00000549876 POTEAQ6S8J7 498 aa9.75□□□□□ -0.85
CCDC38-208ENST00000549876 ADAMTS19Q8TE59 1207 aa9.75□□□□□ -0.85
CCDC38-208ENST00000549876 SLC30A3Q99726 388 aa9.75□□□□□ -0.85
CCDC38-208ENST00000549876 COL9A3Q14050 684 aaPredicted RBP9.74□□□□□ -0.85
CCDC38-208ENST00000549876 TRIM50Q86XT4 487 aa9.74□□□□□ -0.85
CCDC38-208ENST00000549876 PLEKHM2Q8IWE5 1019 aa9.74□□□□□ -0.85
CCDC38-208ENST00000549876 WWC1Q8IX03 1113 aa9.74□□□□□ -0.85
CCDC38-208ENST00000549876 TNFRSF25Q93038 417 aa9.74□□□□□ -0.85
CCDC38-208ENST00000549876 HIRAP54198 1017 aaPredicted RBP9.73□□□□□ -0.85
CCDC38-208ENST00000549876 CLDN10P78369 228 aa9.73□□□□□ -0.85
CCDC38-208ENST00000549876 DOC2BQ14184 412 aa9.73□□□□□ -0.85
CCDC38-208ENST00000549876 STARD13Q9Y3M8 1113 aa9.73□□□□□ -0.85
CCDC38-208ENST00000549876 POM121CA8CG34 1229 aa9.72□□□□□ -0.85
CCDC38-208ENST00000549876 GATA4P43694 442 aa9.72□□□□□ -0.85
CCDC38-208ENST00000549876 C1orf53Q5VUE5 145 aa9.72□□□□□ -0.85
CCDC38-208ENST00000549876 CCDC102BQ68D86 513 aa9.72□□□□□ -0.85
CCDC38-208ENST00000549876 TPCN2Q8NHX9 752 aa9.72□□□□□ -0.85
CCDC38-208ENST00000549876 RHPN1Q8TCX5 695 aa9.72□□□□□ -0.85
CCDC38-208ENST00000549876 NEUROD4Q9HD90 331 aa9.72□□□□□ -0.85
CCDC38-208ENST00000549876 USP17L3A6NCW0 530 aa9.71□□□□□ -0.86
CCDC38-208ENST00000549876 USP17L4A6NCW7 530 aa9.71□□□□□ -0.86
CCDC38-208ENST00000549876 PSMA6P60900 246 aaKnown RBP9.71□□□□□ -0.86
CCDC38-208ENST00000549876 USP17L2Q6R6M4 530 aa9.71□□□□□ -0.86
CCDC38-208ENST00000549876 USP17L1Q7RTZ2 530 aa9.71□□□□□ -0.86
CCDC38-208ENST00000549876 UCN2Q96RP3 112 aa9.71□□□□□ -0.86
CCDC38-208ENST00000549876 TSPAN10Q9H1Z9 355 aaPredicted RBP9.71□□□□□ -0.86
CCDC38-208ENST00000549876 PRDM6Q9NQX0 595 aa9.71□□□□□ -0.86
CCDC38-208ENST00000549876 SPDYE3A6NKU9 549 aa9.7□□□□□ -0.86
CCDC38-208ENST00000549876 M0R2N6 131 aa9.7□□□□□ -0.86
CCDC38-208ENST00000549876 ATP1A2P50993 1020 aa9.7□□□□□ -0.86
CCDC38-208ENST00000549876 SPEM2Q0P670 501 aa9.7□□□□□ -0.86
CCDC38-208ENST00000549876 SEMA6BQ9H3T3 888 aa9.7□□□□□ -0.86
CCDC38-208ENST00000549876 M0R082 166 aa9.69□□□□□ -0.86
CCDC38-208ENST00000549876 KCNQ4P56696 695 aa9.69□□□□□ -0.86
CCDC38-208ENST00000549876 MICALL1Q8N3F8 863 aa9.69□□□□□ -0.86
CCDC38-208ENST00000549876 ZNF417Q8TAU3 575 aa9.69□□□□□ -0.86
CCDC38-208ENST00000549876 ZNF587Q96SQ5 575 aaPredicted RBP9.69□□□□□ -0.86
CCDC38-208ENST00000549876 RAD21O60216 631 aa9.68□□□□□ -0.86
CCDC38-208ENST00000549876 ALBP02768 609 aa9.68□□□□□ -0.86
CCDC38-208ENST00000549876 PRRT3Q5FWE3 981 aa9.68□□□□□ -0.86
CCDC38-208ENST00000549876 LARGE2Q8N3Y3 721 aa9.68□□□□□ -0.86
CCDC38-208ENST00000549876 HSH2DQ96JZ2 352 aa9.68□□□□□ -0.86
CCDC38-208ENST00000549876 PHACTR1Q9C0D0 580 aa9.68□□□□□ -0.86
CCDC38-208ENST00000549876 HCN4Q9Y3Q4 1203 aa9.68□□□□□ -0.86
CCDC38-208ENST00000549876 ATP9BO43861 1147 aa9.67□□□□□ -0.86
CCDC38-208ENST00000549876 DKK1O94907 266 aa9.67□□□□□ -0.86
CCDC38-208ENST00000549876 RSPO4Q2I0M5 234 aaPredicted RBP9.67□□□□□ -0.86
CCDC38-208ENST00000549876 C8orf86Q6ZUL3 223 aa9.67□□□□□ -0.86
CCDC38-208ENST00000549876 OGFOD1Q8N543 542 aa9.67□□□□□ -0.86
CCDC38-208ENST00000549876 BRD7Q9NPI1 651 aa9.67□□□□□ -0.86
CCDC38-208ENST00000549876 ANKIB1Q9P2G1 1089 aa9.67□□□□□ -0.86
CCDC38-208ENST00000549876 PALM3A6NDB9 673 aaPredicted RBP9.66□□□□□ -0.86
CCDC38-208ENST00000549876 NID1P14543 1247 aa9.66□□□□□ -0.86
CCDC38-208ENST00000549876 ADH7P40394 386 aa9.66□□□□□ -0.86
CCDC38-208ENST00000549876 TYRO3Q06418 890 aa9.66□□□□□ -0.86
CCDC38-208ENST00000549876 HDGFL1Q5TGJ6 251 aa9.66□□□□□ -0.86
CCDC38-208ENST00000549876 C20orf204Q6ZNR8 217 aa9.66□□□□□ -0.86
CCDC38-208ENST00000549876 RAB44Q7Z6P3 723 aaPredicted RBP9.66□□□□□ -0.86
CCDC38-208ENST00000549876 SIX5Q8N196 739 aa9.66□□□□□ -0.86
CCDC38-208ENST00000549876 ZNF280CQ8ND82 737 aa9.66□□□□□ -0.86
CCDC38-208ENST00000549876 SUSD3Q96L08 255 aa9.66□□□□□ -0.86
CCDC38-208ENST00000549876 CEP63Q96MT8 703 aa9.66□□□□□ -0.86
CCDC38-208ENST00000549876 SFI1A8K8P3 1242 aa9.65□□□□□ -0.86
CCDC38-208ENST00000549876 C21orf2O43822 256 aa9.65□□□□□ -0.86
CCDC38-208ENST00000549876 NEUROD1Q13562 356 aa9.65□□□□□ -0.86
CCDC38-208ENST00000549876 NKAPLQ5M9Q1 402 aa9.65□□□□□ -0.86
CCDC38-208ENST00000549876 MKRN1Q9UHC7 482 aaKnown RBP9.65□□□□□ -0.86
CCDC38-208ENST00000549876 KCNH4Q9UQ05 1017 aa9.65□□□□□ -0.86
CCDC38-208ENST00000549876 FAM229AH3BQW9 127 aa9.64□□□□□ -0.87
CCDC38-208ENST00000549876 TSEN2Q8NCE0 465 aaKnown RBP9.64□□□□□ -0.87
CCDC38-208ENST00000549876 TPSG1Q9NRR2 321 aa9.64□□□□□ -0.87
CCDC38-208ENST00000549876 CHMP3Q9Y3E7 222 aa9.64□□□□□ -0.87
CCDC38-208ENST00000549876 APBA3O96018 575 aa9.63□□□□□ -0.87
CCDC38-208ENST00000549876 UBTFP17480 764 aaKnown RBP9.63□□□□□ -0.87
CCDC38-208ENST00000549876 FLIIQ13045 1269 aa9.63□□□□□ -0.87
CCDC38-208ENST00000549876 STAG2Q8N3U4 1231 aa9.63□□□□□ -0.87
CCDC38-208ENST00000549876 TRIM28Q13263 835 aaKnown RBP9.62□□□□□ -0.87
CCDC38-208ENST00000549876 PPP1R12BO60237 982 aaPredicted RBP9.61□□□□□ -0.87
CCDC38-208ENST00000549876 ALDH16A1Q8IZ83 802 aa9.61□□□□□ -0.87
CCDC38-208ENST00000549876 KRTAP4-8Q9BYQ9 185 aa9.61□□□□□ -0.87
CCDC38-208ENST00000549876 ZNF594Q96JF6 807 aaPredicted RBP9.6□□□□□ -0.87
CCDC38-208ENST00000549876 NACC1Q96RE7 527 aa9.6□□□□□ -0.87
CCDC38-208ENST00000549876 C2orf49Q9BVC5 232 aaPredicted RBP9.6□□□□□ -0.87
CCDC38-208ENST00000549876 ATAD2Q6PL18 1390 aa9.6□□□□□ -0.87
CCDC38-208ENST00000549876 GRIK4Q16099 956 aa9.59□□□□□ -0.87
CCDC38-208ENST00000549876 ZMYM1Q5SVZ6 1142 aa9.59□□□□□ -0.87
CCDC38-208ENST00000549876 BTLAQ7Z6A9 289 aa9.59□□□□□ -0.87
CCDC38-208ENST00000549876 BHMTQ93088 406 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms