RNA–Protein interactions for RNA: ENST00000549784.5

CALCOCO1-216, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 4

Gene CALCOCO1, Length 746 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-216ENST00000549784 PRPF40BQ6NWY9 871 aaKnown RBP12.94□□□□□ -0.34
CALCOCO1-216ENST00000549784 OLFM4Q6UX06 510 aa12.94□□□□□ -0.34
CALCOCO1-216ENST00000549784 DZIP3Q86Y13 1208 aaKnown RBP12.94□□□□□ -0.34
CALCOCO1-216ENST00000549784 CNBD1Q8NA66 436 aa12.94□□□□□ -0.34
CALCOCO1-216ENST00000549784 RSPH6AQ9H0K4 717 aa12.94□□□□□ -0.34
CALCOCO1-216ENST00000549784 TAOK3Q9H2K8 898 aa12.94□□□□□ -0.34
CALCOCO1-216ENST00000549784 SIPA1L3O60292 1781 aaPredicted RBP12.94□□□□□ -0.34
CALCOCO1-216ENST00000549784 LTBP3Q9NS15 1303 aa12.93□□□□□ -0.34
CALCOCO1-216ENST00000549784 STYK1Q6J9G0 422 aa12.93□□□□□ -0.34
CALCOCO1-216ENST00000549784 MCM10Q7L590 875 aa12.93□□□□□ -0.34
CALCOCO1-216ENST00000549784 CFAP53Q96M91 514 aa12.93□□□□□ -0.34
CALCOCO1-216ENST00000549784 CCDC88AQ3V6T2 1871 aa12.93□□□□□ -0.34
CALCOCO1-216ENST00000549784 SLX4Q8IY92 1834 aa12.92□□□□□ -0.34
CALCOCO1-216ENST00000549784 NBPF26B4DH59 902 aa12.92□□□□□ -0.34
CALCOCO1-216ENST00000549784 DCTN1Q14203 1278 aa12.92□□□□□ -0.34
CALCOCO1-216ENST00000549784 RALBP1Q15311 655 aa12.92□□□□□ -0.34
CALCOCO1-216ENST00000549784 CHADLQ6NUI6 762 aa12.92□□□□□ -0.34
CALCOCO1-216ENST00000549784 NBPF10Q6P3W6 841 aaKnown RBP12.92□□□□□ -0.34
CALCOCO1-216ENST00000549784 NBPF15Q8N660 670 aa12.92□□□□□ -0.34
CALCOCO1-216ENST00000549784 CNKSR1Q969H4 720 aa12.92□□□□□ -0.34
CALCOCO1-216ENST00000549784 MASTLQ96GX5 879 aa12.92□□□□□ -0.34
CALCOCO1-216ENST00000549784 MKRN1Q9UHC7 482 aaKnown RBP12.92□□□□□ -0.34
CALCOCO1-216ENST00000549784 PDZRN3Q9UPQ7 1066 aa12.92□□□□□ -0.34
CALCOCO1-216ENST00000549784 FER1L6Q2WGJ9 1857 aa12.91□□□□□ -0.34
CALCOCO1-216ENST00000549784 KLRG2A4D1S0 409 aaPredicted RBP12.9□□□□□ -0.34
CALCOCO1-216ENST00000549784 NPHP1O15259 732 aa12.9□□□□□ -0.34
CALCOCO1-216ENST00000549784 ST5P78524 1137 aa12.9□□□□□ -0.34
CALCOCO1-216ENST00000549784 CREBZFQ9NS37 354 aa12.9□□□□□ -0.34
CALCOCO1-216ENST00000549784 ZNF541Q9H0D2 1346 aa12.89□□□□□ -0.35
CALCOCO1-216ENST00000549784 FAM177BA6PVY3 158 aa12.89□□□□□ -0.35
CALCOCO1-216ENST00000549784 PPP2R1AP30153 589 aa12.89□□□□□ -0.35
CALCOCO1-216ENST00000549784 HLFQ16534 295 aa12.89□□□□□ -0.35
CALCOCO1-216ENST00000549784 SLC51AQ86UW1 340 aa12.89□□□□□ -0.35
CALCOCO1-216ENST00000549784 NBPF5PQ86XG9 351 aaPredicted RBP12.89□□□□□ -0.35
CALCOCO1-216ENST00000549784 ZNF277Q9NRM2 450 aaPredicted RBP12.89□□□□□ -0.35
CALCOCO1-216ENST00000549784 PASKQ96RG2 1323 aa12.88□□□□□ -0.35
CALCOCO1-216ENST00000549784 SNRPA1P09661 255 aaKnown RBP12.88□□□□□ -0.35
CALCOCO1-216ENST00000549784 CLEC4GQ6UXB4 293 aa12.88□□□□□ -0.35
CALCOCO1-216ENST00000549784 L3MBTL3Q96JM7 780 aaPredicted RBP12.88□□□□□ -0.35
CALCOCO1-216ENST00000549784 TAF1DQ9H5J8 278 aaPredicted RBP12.88□□□□□ -0.35
CALCOCO1-216ENST00000549784 MIS18AQ9NYP9 233 aa12.88□□□□□ -0.35
CALCOCO1-216ENST00000549784 BCORQ6W2J9 1755 aa12.88□□□□□ -0.35
CALCOCO1-216ENST00000549784 ITGBL1O95965 494 aaPredicted RBP12.87□□□□□ -0.35
CALCOCO1-216ENST00000549784 NPR1P16066 1061 aa12.87□□□□□ -0.35
CALCOCO1-216ENST00000549784 CCDC93Q567U6 631 aa12.87□□□□□ -0.35
CALCOCO1-216ENST00000549784 NPM2Q86SE8 214 aaKnown RBP12.87□□□□□ -0.35
CALCOCO1-216ENST00000549784 NIP7Q9Y221 180 aaKnown RBP eCLIP12.87□□□□□ -0.35
CALCOCO1-216ENST00000549784 NUDCQ9Y266 331 aa12.87□□□□□ -0.35
CALCOCO1-216ENST00000549784 PCNTO95613 3336 aa12.87□□□□□ -0.35
CALCOCO1-216ENST00000549784 DICER1Q9UPY3 1922 aaKnown RBP12.86□□□□□ -0.35
CALCOCO1-216ENST00000549784 FOXN1O15353 648 aa12.86□□□□□ -0.35
CALCOCO1-216ENST00000549784 U2AF1L5P0DN76 240 aaPredicted RBP12.86□□□□□ -0.35
CALCOCO1-216ENST00000549784 U2AF1Q01081 240 aaKnown RBP eCLIP12.86□□□□□ -0.35
CALCOCO1-216ENST00000549784 FKBP4Q02790 459 aaKnown RBP eCLIP12.86□□□□□ -0.35
CALCOCO1-216ENST00000549784 SOGA3Q5TF21 947 aa12.86□□□□□ -0.35
CALCOCO1-216ENST00000549784 MYBBP1AQ9BQG0 1328 aaKnown RBP12.86□□□□□ -0.35
CALCOCO1-216ENST00000549784 CNTNAP1P78357 1384 aa12.85□□□□□ -0.35
CALCOCO1-216ENST00000549784 VEGFBP49765 207 aa12.85□□□□□ -0.35
CALCOCO1-216ENST00000549784 EAPPQ56P03 285 aaPredicted RBP12.85□□□□□ -0.35
CALCOCO1-216ENST00000549784 TPTE2Q6XPS3 522 aa12.85□□□□□ -0.35
CALCOCO1-216ENST00000549784 LDHDQ86WU2 507 aa12.85□□□□□ -0.35
CALCOCO1-216ENST00000549784 CACNA1SQ13698 1873 aa12.85□□□□□ -0.35
CALCOCO1-216ENST00000549784 IQCA1LA6NCM1 817 aa12.84□□□□□ -0.35
CALCOCO1-216ENST00000549784 NUTM1Q86Y26 1132 aa12.84□□□□□ -0.35
CALCOCO1-216ENST00000549784 SYNE4Q8N205 404 aa12.84□□□□□ -0.35
CALCOCO1-216ENST00000549784 NGEFQ8N5V2 710 aa12.84□□□□□ -0.35
CALCOCO1-216ENST00000549784 RTF1Q92541 710 aaKnown RBP12.84□□□□□ -0.35
CALCOCO1-216ENST00000549784 ZNF652Q9Y2D9 606 aa12.84□□□□□ -0.35
CALCOCO1-216ENST00000549784 SNED1Q8TER0 1413 aa12.84□□□□□ -0.35
CALCOCO1-216ENST00000549784 RNF123Q5XPI4 1314 aa12.84□□□□□ -0.35
CALCOCO1-216ENST00000549784 ARFGEF2Q9Y6D5 1785 aa12.84□□□□□ -0.35
CALCOCO1-216ENST00000549784 DLG5Q8TDM6 1919 aa12.84□□□□□ -0.35
CALCOCO1-216ENST00000549784 COL4A5P29400 1685 aa12.83□□□□□ -0.35
CALCOCO1-216ENST00000549784 ABCC12Q96J65 1359 aa12.83□□□□□ -0.36
CALCOCO1-216ENST00000549784 FZD9O00144 591 aa12.83□□□□□ -0.36
CALCOCO1-216ENST00000549784 EPHX2P34913 555 aa12.83□□□□□ -0.36
CALCOCO1-216ENST00000549784 TAF7Q15545 349 aaPredicted RBP12.83□□□□□ -0.36
CALCOCO1-216ENST00000549784 MAP1SQ66K74 1059 aaPredicted RBP12.83□□□□□ -0.36
CALCOCO1-216ENST00000549784 PRKRIP1Q9H875 184 aaPredicted RBP12.83□□□□□ -0.36
CALCOCO1-216ENST00000549784 HACL1Q9UJ83 578 aa12.83□□□□□ -0.36
CALCOCO1-216ENST00000549784 TMEM88BA6NKF7 163 aa12.82□□□□□ -0.36
CALCOCO1-216ENST00000549784 IARSP41252 1262 aaKnown RBP12.82□□□□□ -0.36
CALCOCO1-216ENST00000549784 FMR1Q06787 632 aaKnown RBP eCLIP12.82□□□□□ -0.36
CALCOCO1-216ENST00000549784 CRY2Q49AN0 593 aa12.82□□□□□ -0.36
CALCOCO1-216ENST00000549784 TTLL7Q6ZT98 887 aa12.82□□□□□ -0.36
CALCOCO1-216ENST00000549784 CLEC11AQ9Y240 323 aa12.82□□□□□ -0.36
CALCOCO1-216ENST00000549784 RGL2O15211 777 aa12.81□□□□□ -0.36
CALCOCO1-216ENST00000549784 ANP32CO43423 234 aa12.81□□□□□ -0.36
CALCOCO1-216ENST00000549784 HTATSF1O43719 755 aaKnown RBP12.81□□□□□ -0.36
CALCOCO1-216ENST00000549784 C3orf67Q6ZVT6 689 aa12.81□□□□□ -0.36
CALCOCO1-216ENST00000549784 RTKN2Q8IZC4 609 aa12.81□□□□□ -0.36
CALCOCO1-216ENST00000549784 THUMPD2Q9BTF0 503 aaKnown RBP12.81□□□□□ -0.36
CALCOCO1-216ENST00000549784 UBN2Q6ZU65 1347 aa12.81□□□□□ -0.36
CALCOCO1-216ENST00000549784 ADAMTSL1Q8N6G6 1762 aa12.81□□□□□ -0.36
CALCOCO1-216ENST00000549784 NEFMP07197 916 aa12.8□□□□□ -0.36
CALCOCO1-216ENST00000549784 ALDH1B1P30837 517 aa12.8□□□□□ -0.36
CALCOCO1-216ENST00000549784 CNTROBQ8N137 903 aa12.8□□□□□ -0.36
CALCOCO1-216ENST00000549784 WBP1LQ9NX94 342 aa12.8□□□□□ -0.36
CALCOCO1-216ENST00000549784 GPTP24298 496 aa12.79□□□□□ -0.36
CALCOCO1-216ENST00000549784 GTF2E1P29083 439 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms