RNA–Protein interactions for RNA: ENST00000549549.1

PRIM1-204, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-204ENST00000549549 KLK14Q9P0G3 267 aa13.92□□□□□ -0.18
PRIM1-204ENST00000549549 VTI1BQ9UEU0 232 aa13.92□□□□□ -0.18
PRIM1-204ENST00000549549 GNA15P30679 374 aa13.91□□□□□ -0.18
PRIM1-204ENST00000549549 RNF34Q969K3 372 aa13.91□□□□□ -0.18
PRIM1-204ENST00000549549 FRMD6Q96NE9 622 aa13.91□□□□□ -0.18
PRIM1-204ENST00000549549 CSRNP1Q96S65 589 aa13.91□□□□□ -0.18
PRIM1-204ENST00000549549 NIFKQ9BYG3 293 aaKnown RBP13.9□□□□□ -0.18
PRIM1-204ENST00000549549 TGIF2Q9GZN2 237 aa13.9□□□□□ -0.18
PRIM1-204ENST00000549549 CBLBQ13191 982 aa13.89□□□□□ -0.19
PRIM1-204ENST00000549549 NNTQ13423 1086 aa13.89□□□□□ -0.19
PRIM1-204ENST00000549549 KLF16Q9BXK1 252 aaPredicted RBP13.89□□□□□ -0.19
PRIM1-204ENST00000549549 PARP3Q9Y6F1 533 aa13.89□□□□□ -0.19
PRIM1-204ENST00000549549 CDAN1Q8IWY9 1227 aa13.88□□□□□ -0.19
PRIM1-204ENST00000549549 FAM177A1Q8N128 213 aaPredicted RBP13.88□□□□□ -0.19
PRIM1-204ENST00000549549 SLC43A3Q8NBI5 491 aa13.88□□□□□ -0.19
PRIM1-204ENST00000549549 NLRP3Q96P20 1036 aa13.88□□□□□ -0.19
PRIM1-204ENST00000549549 PUS7Q96PZ0 661 aaKnown RBP13.88□□□□□ -0.19
PRIM1-204ENST00000549549 AK5Q9Y6K8 562 aa13.88□□□□□ -0.19
PRIM1-204ENST00000549549 PCSK2P16519 638 aa13.87□□□□□ -0.19
PRIM1-204ENST00000549549 ZNF76P36508 570 aa13.87□□□□□ -0.19
PRIM1-204ENST00000549549 TREML1Q86YW5 311 aa13.87□□□□□ -0.19
PRIM1-204ENST00000549549 ZSCAN10Q96SZ4 725 aaPredicted RBP13.87□□□□□ -0.19
PRIM1-204ENST00000549549 C7orf43Q8WVR3 580 aa13.86□□□□□ -0.19
PRIM1-204ENST00000549549 TINF2Q9BSI4 451 aa13.86□□□□□ -0.19
PRIM1-204ENST00000549549 DNAJC25Q9H1X3 360 aa13.86□□□□□ -0.19
PRIM1-204ENST00000549549 BCS1LQ9Y276 419 aa13.86□□□□□ -0.19
PRIM1-204ENST00000549549 RPLP1P05386 114 aaKnown RBP13.85□□□□□ -0.19
PRIM1-204ENST00000549549 NEFLP07196 543 aa13.85□□□□□ -0.19
PRIM1-204ENST00000549549 SLC19A1P41440 591 aa13.85□□□□□ -0.19
PRIM1-204ENST00000549549 GGNBP2Q9H3C7 697 aa13.85□□□□□ -0.19
PRIM1-204ENST00000549549 PPP1R1BQ9UD71 204 aaPredicted RBP13.85□□□□□ -0.19
PRIM1-204ENST00000549549 MEN1O00255 615 aa13.84□□□□□ -0.19
PRIM1-204ENST00000549549 EIF1AYO14602 144 aaKnown RBP13.84□□□□□ -0.19
PRIM1-204ENST00000549549 ALDH1A1P00352 501 aa13.84□□□□□ -0.19
PRIM1-204ENST00000549549 GPR152Q8TDT2 470 aa13.84□□□□□ -0.19
PRIM1-204ENST00000549549 RHBDD1Q8TEB9 315 aa13.84□□□□□ -0.19
PRIM1-204ENST00000549549 NUDT16Q96DE0 195 aaKnown RBP13.84□□□□□ -0.19
PRIM1-204ENST00000549549 FAM13BQ9NYF5 915 aa13.84□□□□□ -0.19
PRIM1-204ENST00000549549 ORC1Q13415 861 aa13.83□□□□□ -0.2
PRIM1-204ENST00000549549 ITPKCQ96DU7 683 aa13.83□□□□□ -0.2
PRIM1-204ENST00000549549 CTSHP09668 335 aa13.82□□□□□ -0.2
PRIM1-204ENST00000549549 CRELD1Q96HD1 420 aa13.82□□□□□ -0.2
PRIM1-204ENST00000549549 AGBL1Q96MI9 1066 aa13.82□□□□□ -0.2
PRIM1-204ENST00000549549 GRIP2Q9C0E4 1043 aa13.82□□□□□ -0.2
PRIM1-204ENST00000549549 WASF2Q9Y6W5 498 aa13.82□□□□□ -0.2
PRIM1-204ENST00000549549 HMGB1P09429 215 aaKnown RBP13.81□□□□□ -0.2
PRIM1-204ENST00000549549 GPC1P35052 558 aa13.81□□□□□ -0.2
PRIM1-204ENST00000549549 TXLNAP40222 546 aa13.81□□□□□ -0.2
PRIM1-204ENST00000549549 TMEM214Q6NUQ4 689 aaKnown RBP13.81□□□□□ -0.2
PRIM1-204ENST00000549549 MICAL2O94851 1124 aa13.8□□□□□ -0.2
PRIM1-204ENST00000549549 SPRYD7Q5W111 196 aa13.8□□□□□ -0.2
PRIM1-204ENST00000549549 CCSER2Q9H7U1 834 aa13.8□□□□□ -0.2
PRIM1-204ENST00000549549 ZIC2O95409 532 aaPredicted RBP13.79□□□□□ -0.2
PRIM1-204ENST00000549549 HIF1AQ16665 826 aa13.79□□□□□ -0.2
PRIM1-204ENST00000549549 NLRP2Q9NX02 1062 aa13.79□□□□□ -0.2
PRIM1-204ENST00000549549 DMGDHQ9UI17 866 aaKnown RBP13.79□□□□□ -0.2
PRIM1-204ENST00000549549 TGFBR3LH3BV60 316 aa13.78□□□□□ -0.2
PRIM1-204ENST00000549549 OPLAHO14841 1288 aa13.78□□□□□ -0.2
PRIM1-204ENST00000549549 GTF2E1P29083 439 aaPredicted RBP13.78□□□□□ -0.2
PRIM1-204ENST00000549549 RELBQ01201 579 aa13.78□□□□□ -0.2
PRIM1-204ENST00000549549 C8orf34Q49A92 452 aa13.78□□□□□ -0.2
PRIM1-204ENST00000549549 XKR5Q6UX68 686 aa13.78□□□□□ -0.2
PRIM1-204ENST00000549549 SPG7Q9UQ90 795 aa13.78□□□□□ -0.2
PRIM1-204ENST00000549549 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.78□□□□□ -0.2
PRIM1-204ENST00000549549 CPNE3O75131 537 aaKnown RBP13.77□□□□□ -0.21
PRIM1-204ENST00000549549 HSP90B1P14625 803 aaKnown RBP13.77□□□□□ -0.21
PRIM1-204ENST00000549549 TTC16Q8NEE8 873 aa13.77□□□□□ -0.21
PRIM1-204ENST00000549549 SNIP1Q8TAD8 396 aaKnown RBP13.77□□□□□ -0.21
PRIM1-204ENST00000549549 ZNF395Q9H8N7 513 aaPredicted RBP13.77□□□□□ -0.21
PRIM1-204ENST00000549549 GPC6Q9Y625 555 aaPredicted RBP13.77□□□□□ -0.21
PRIM1-204ENST00000549549 CANXP27824 592 aaKnown RBP13.76□□□□□ -0.21
PRIM1-204ENST00000549549 GNASQ5JWF2 1037 aa13.76□□□□□ -0.21
PRIM1-204ENST00000549549 IER5Q5VY09 327 aa13.76□□□□□ -0.21
PRIM1-204ENST00000549549 GMLQ99445 158 aa13.76□□□□□ -0.21
PRIM1-204ENST00000549549 TANGO6Q9C0B7 1094 aa13.76□□□□□ -0.21
PRIM1-204ENST00000549549 ACBD3Q9H3P7 528 aa13.76□□□□□ -0.21
PRIM1-204ENST00000549549 ZFAND3Q9H8U3 227 aa13.76□□□□□ -0.21
PRIM1-204ENST00000549549 ZDHHC3Q9NYG2 299 aa13.76□□□□□ -0.21
PRIM1-204ENST00000549549 PKD2L1Q9P0L9 805 aa13.76□□□□□ -0.21
PRIM1-204ENST00000549549 GIPC1O14908 333 aa13.75□□□□□ -0.21
PRIM1-204ENST00000549549 EIF4BP23588 611 aaKnown RBP13.75□□□□□ -0.21
PRIM1-204ENST00000549549 RNF144AP50876 292 aaPredicted RBP13.75□□□□□ -0.21
PRIM1-204ENST00000549549 C4orf17Q53FE4 359 aa13.75□□□□□ -0.21
PRIM1-204ENST00000549549 CAPN10Q9HC96 672 aa13.75□□□□□ -0.21
PRIM1-204ENST00000549549 A6NHS1 94 aa13.74□□□□□ -0.21
PRIM1-204ENST00000549549 TIMP2P16035 220 aa13.74□□□□□ -0.21
PRIM1-204ENST00000549549 WDR4P57081 412 aaKnown RBP13.74□□□□□ -0.21
PRIM1-204ENST00000549549 PTPN12Q05209 780 aaKnown RBP13.74□□□□□ -0.21
PRIM1-204ENST00000549549 RHPN1Q8TCX5 695 aa13.74□□□□□ -0.21
PRIM1-204ENST00000549549 SPATA32Q96LK8 384 aa13.74□□□□□ -0.21
PRIM1-204ENST00000549549 PRKAG2Q9UGJ0 569 aa13.74□□□□□ -0.21
PRIM1-204ENST00000549549 ZNF598Q86UK7 904 aaKnown RBP13.73□□□□□ -0.21
PRIM1-204ENST00000549549 SUSD3Q96L08 255 aa13.73□□□□□ -0.21
PRIM1-204ENST00000549549 DDX41Q9UJV9 622 aaKnown RBP13.73□□□□□ -0.21
PRIM1-204ENST00000549549 PLA2G4AP47712 749 aa13.72□□□□□ -0.21
PRIM1-204ENST00000549549 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.72□□□□□ -0.21
PRIM1-204ENST00000549549 ZNF697Q5TEC3 545 aa13.72□□□□□ -0.21
PRIM1-204ENST00000549549 ARMC5Q96C12 935 aa13.72□□□□□ -0.21
PRIM1-204ENST00000549549 CADPSQ9ULU8 1353 aa13.71□□□□□ -0.21
PRIM1-204ENST00000549549 TNFRSF21O75509 655 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms