RNA–Protein interactions for RNA: ENST00000549512.1

ZNF641-208, Transcript of zinc finger protein 641, human

TSL 3

Gene ZNF641, Length 442 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF641-208	ENST00000549512	HMMR	O75330	724 aa		10.9	□□□□□ -0.66
ZNF641-208	ENST00000549512	FAM182B	Q5T319	152 aa		10.9	□□□□□ -0.66
ZNF641-208	ENST00000549512	CEP85	Q6P2H3	762 aa		10.9	□□□□□ -0.66
ZNF641-208	ENST00000549512	SMC5	Q8IY18	1101 aa		10.9	□□□□□ -0.66
ZNF641-208	ENST00000549512	GCC1	Q96CN9	775 aa		10.9	□□□□□ -0.66
ZNF641-208	ENST00000549512	MYD88	Q99836	296 aa		10.9	□□□□□ -0.66
ZNF641-208	ENST00000549512	C9orf78	Q9NZ63	289 aa	Predicted RBP	10.9	□□□□□ -0.66
ZNF641-208	ENST00000549512	ZNF330	Q9Y3S2	320 aa	Predicted RBP	10.9	□□□□□ -0.66
ZNF641-208	ENST00000549512	NUP98	P52948	1817 aa		10.9	□□□□□ -0.66
ZNF641-208	ENST00000549512	MYH14	Q7Z406	1995 aa	Known RBP	10.9	□□□□□ -0.66
ZNF641-208	ENST00000549512	ANKRD36C	Q5JPF3	1778 aa		10.9	□□□□□ -0.67
ZNF641-208	ENST00000549512	TAF1L	Q8IZX4	1826 aa		10.89	□□□□□ -0.67
ZNF641-208	ENST00000549512	CWF19L2	Q2TBE0	894 aa	Known RBP	10.89	□□□□□ -0.67
ZNF641-208	ENST00000549512	KIF6	Q6ZMV9	814 aa		10.89	□□□□□ -0.67
ZNF641-208	ENST00000549512	TTLL7	Q6ZT98	887 aa		10.89	□□□□□ -0.67
ZNF641-208	ENST00000549512	KRT27	Q7Z3Y8	459 aa		10.89	□□□□□ -0.67
ZNF641-208	ENST00000549512	NPM2	Q86SE8	214 aa	Known RBP	10.89	□□□□□ -0.67
ZNF641-208	ENST00000549512	SIRT2	Q8IXJ6	389 aa		10.89	□□□□□ -0.67
ZNF641-208	ENST00000549512	PDZRN3	Q9UPQ7	1066 aa		10.89	□□□□□ -0.67
ZNF641-208	ENST00000549512	LRRFIP2	Q9Y608	721 aa	Known RBP	10.89	□□□□□ -0.67
ZNF641-208	ENST00000549512	NEURL1B	A8MQ27	555 aa		10.88	□□□□□ -0.67
ZNF641-208	ENST00000549512	GRM8	O00222	908 aa		10.88	□□□□□ -0.67
ZNF641-208	ENST00000549512	IGKV5-2	P06315	115 aa		10.88	□□□□□ -0.67
ZNF641-208	ENST00000549512	IL6ST	P40189	918 aa	Predicted RBP	10.88	□□□□□ -0.67
ZNF641-208	ENST00000549512	FAM196A	Q6ZSG2	479 aa		10.88	□□□□□ -0.67
ZNF641-208	ENST00000549512	ZBTB3	Q9H5J0	574 aa		10.88	□□□□□ -0.67
ZNF641-208	ENST00000549512	CCDC87	Q9NVE4	849 aa		10.88	□□□□□ -0.67
ZNF641-208	ENST00000549512	ZBTB1	Q9Y2K1	713 aa		10.88	□□□□□ -0.67
ZNF641-208	ENST00000549512	UTY	O14607	1347 aa		10.87	□□□□□ -0.67
ZNF641-208	ENST00000549512	NBPF7	P0C2Y1	421 aa	Predicted RBP	10.87	□□□□□ -0.67
ZNF641-208	ENST00000549512	CRKL	P46109	303 aa	Known RBP	10.87	□□□□□ -0.67
ZNF641-208	ENST00000549512	RGS3	P49796	1198 aa		10.87	□□□□□ -0.67
ZNF641-208	ENST00000549512	ATP8B2	P98198	1209 aa		10.87	□□□□□ -0.67
ZNF641-208	ENST00000549512	ITPK1	Q13572	414 aa		10.87	□□□□□ -0.67
ZNF641-208	ENST00000549512	GCKR	Q14397	625 aa		10.87	□□□□□ -0.67
ZNF641-208	ENST00000549512	PTF1A	Q7RTS3	328 aa		10.87	□□□□□ -0.67
ZNF641-208	ENST00000549512	ARX	Q96QS3	562 aa		10.87	□□□□□ -0.67
ZNF641-208	ENST00000549512	MAP3K15	Q6ZN16	1313 aa		10.86	□□□□□ -0.67
ZNF641-208	ENST00000549512	RXRB	P28702	533 aa		10.86	□□□□□ -0.67
ZNF641-208	ENST00000549512	INTS5	Q6P9B9	1019 aa	Known RBP	10.86	□□□□□ -0.67
ZNF641-208	ENST00000549512	SKAP1	Q86WV1	359 aa		10.86	□□□□□ -0.67
ZNF641-208	ENST00000549512	BCL11B	Q9C0K0	894 aa	Predicted RBP	10.86	□□□□□ -0.67
ZNF641-208	ENST00000549512	DCTPP1	Q9H773	170 aa		10.86	□□□□□ -0.67
ZNF641-208	ENST00000549512	ATP5J2-PTCD1	G3V325	749 aa		10.85	□□□□□ -0.67
ZNF641-208	ENST00000549512	EIF5	P55010	431 aa	Known RBP	10.85	□□□□□ -0.67
ZNF641-208	ENST00000549512	NUCB1	Q02818	461 aa		10.85	□□□□□ -0.67
ZNF641-208	ENST00000549512	TCIRG1	Q13488	830 aa		10.85	□□□□□ -0.67
ZNF641-208	ENST00000549512	HSP90AB3P	Q58FF7	597 aa		10.85	□□□□□ -0.67
ZNF641-208	ENST00000549512	ANKRD45	Q5TZF3	282 aa		10.85	□□□□□ -0.67
ZNF641-208	ENST00000549512	CWC25	Q9NXE8	425 aa	Predicted RBP	10.85	□□□□□ -0.67
ZNF641-208	ENST00000549512	ZBTB47	Q9UFB7	747 aa	Predicted RBP	10.85	□□□□□ -0.67
ZNF641-208	ENST00000549512	BCOR	Q6W2J9	1755 aa		10.85	□□□□□ -0.67
ZNF641-208	ENST00000549512	CNTNAP4	Q9C0A0	1308 aa		10.84	□□□□□ -0.67
ZNF641-208	ENST00000549512		A0A087WZG4	1122 aa		10.84	□□□□□ -0.67
ZNF641-208	ENST00000549512	ERVV-1	B6SEH8	477 aa		10.84	□□□□□ -0.67
ZNF641-208	ENST00000549512	GIGYF2	Q6Y7W6	1299 aa	Known RBP	10.84	□□□□□ -0.67
ZNF641-208	ENST00000549512	PPP1R42	Q7Z4L9	355 aa		10.84	□□□□□ -0.67
ZNF641-208	ENST00000549512	CHD1L	Q86WJ1	897 aa		10.84	□□□□□ -0.67
ZNF641-208	ENST00000549512	DZIP3	Q86Y13	1208 aa	Known RBP	10.84	□□□□□ -0.67
ZNF641-208	ENST00000549512	CCDC191	Q8NCU4	936 aa		10.84	□□□□□ -0.67
ZNF641-208	ENST00000549512	LINC00116	Q8NCU8	138 aa		10.84	□□□□□ -0.67
ZNF641-208	ENST00000549512	CCNL1	Q9UK58	526 aa	Predicted RBP	10.84	□□□□□ -0.67
ZNF641-208	ENST00000549512	PNMA6E	A0A0J9YXQ4	647 aa		10.83	□□□□□ -0.68
ZNF641-208	ENST00000549512	SRGAP3	O43295	1099 aa		10.83	□□□□□ -0.68
ZNF641-208	ENST00000549512	TRIM28	Q13263	835 aa	Known RBP	10.83	□□□□□ -0.68
ZNF641-208	ENST00000549512	MTX1	Q13505	466 aa		10.83	□□□□□ -0.68
ZNF641-208	ENST00000549512	POLA2	Q14181	598 aa		10.83	□□□□□ -0.68
ZNF641-208	ENST00000549512	SSH3	Q8TE77	659 aa		10.83	□□□□□ -0.68
ZNF641-208	ENST00000549512	SUCLG2	Q96I99	432 aa		10.83	□□□□□ -0.68
ZNF641-208	ENST00000549512	ISCA1	Q9BUE6	129 aa		10.83	□□□□□ -0.68
ZNF641-208	ENST00000549512	LNPK	Q9C0E8	428 aa		10.83	□□□□□ -0.68
ZNF641-208	ENST00000549512	C4B	P0C0L5	1744 aa		10.83	□□□□□ -0.68
ZNF641-208	ENST00000549512	MYH3	P11055	1940 aa		10.82	□□□□□ -0.68
ZNF641-208	ENST00000549512	COL15A1	P39059	1388 aa		10.82	□□□□□ -0.68
ZNF641-208	ENST00000549512		H7C1W4	665 aa		10.82	□□□□□ -0.68
ZNF641-208	ENST00000549512	TRIM37	O94972	964 aa		10.82	□□□□□ -0.68
ZNF641-208	ENST00000549512	HLF	Q16534	295 aa		10.82	□□□□□ -0.68
ZNF641-208	ENST00000549512	RC3H1	Q5TC82	1133 aa	Known RBP	10.82	□□□□□ -0.68
ZNF641-208	ENST00000549512	UBE3B	Q7Z3V4	1068 aa		10.82	□□□□□ -0.68
ZNF641-208	ENST00000549512	TBC1D2B	Q9UPU7	963 aa		10.82	□□□□□ -0.68
ZNF641-208	ENST00000549512	PDE4A	P27815	886 aa		10.81	□□□□□ -0.68
ZNF641-208	ENST00000549512	KCNQ4	P56696	695 aa		10.81	□□□□□ -0.68
ZNF641-208	ENST00000549512	KAZALD1	Q96I82	304 aa		10.81	□□□□□ -0.68
ZNF641-208	ENST00000549512	BICC1	Q9H694	974 aa	Known RBP	10.81	□□□□□ -0.68
ZNF641-208	ENST00000549512	RGS17	Q9UGC6	210 aa	Predicted RBP	10.81	□□□□□ -0.68
ZNF641-208	ENST00000549512	SCN7A	Q01118	1682 aa		10.81	□□□□□ -0.68
ZNF641-208	ENST00000549512	RAB11FIP3	O75154	756 aa		10.8	□□□□□ -0.68
ZNF641-208	ENST00000549512	RPS6KA4	O75676	772 aa		10.8	□□□□□ -0.68
ZNF641-208	ENST00000549512	SURF6	O75683	361 aa	Known RBP	10.8	□□□□□ -0.68
ZNF641-208	ENST00000549512	HMGB2	P26583	209 aa	Known RBP	10.8	□□□□□ -0.68
ZNF641-208	ENST00000549512	CASP7	P55210	303 aa		10.8	□□□□□ -0.68
ZNF641-208	ENST00000549512	HSP90AB4P	Q58FF6	505 aa		10.8	□□□□□ -0.68
ZNF641-208	ENST00000549512	JARID2	Q92833	1246 aa	Predicted RBP	10.8	□□□□□ -0.68
ZNF641-208	ENST00000549512	TSHZ2	Q9NRE2	1034 aa		10.8	□□□□□ -0.68
ZNF641-208	ENST00000549512	EXOC6B	Q9Y2D4	811 aa		10.8	□□□□□ -0.68
ZNF641-208	ENST00000549512	ZNF652	Q9Y2D9	606 aa		10.8	□□□□□ -0.68
ZNF641-208	ENST00000549512	UBR3	Q6ZT12	1888 aa		10.79	□□□□□ -0.68
ZNF641-208	ENST00000549512	C4A	P0C0L4	1744 aa		10.79	□□□□□ -0.68
ZNF641-208	ENST00000549512	APBB1	O00213	710 aa		10.79	□□□□□ -0.68
ZNF641-208	ENST00000549512	GNPAT	O15228	680 aa		10.79	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms