RNA–Protein interactions for RNA: ENST00000549226.5

CACNB3-211, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 929 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-211ENST00000549226 LINC00116Q8NCU8 138 aa17.85■□□□□ 0.45
CACNB3-211ENST00000549226 LINS1Q8NG48 757 aa17.85■□□□□ 0.45
CACNB3-211ENST00000549226 HDAC5Q9UQL6 1122 aa17.85■□□□□ 0.45
CACNB3-211ENST00000549226 ERVV-1B6SEH8 477 aa17.84■□□□□ 0.45
CACNB3-211ENST00000549226 HSP90AB3PQ58FF7 597 aa17.84■□□□□ 0.45
CACNB3-211ENST00000549226 BEND3Q5T5X7 828 aa17.84■□□□□ 0.45
CACNB3-211ENST00000549226 METTL22Q9BUU2 404 aaPredicted RBP17.84■□□□□ 0.45
CACNB3-211ENST00000549226 ZBTB7BO15156 539 aaPredicted RBP17.83■□□□□ 0.44
CACNB3-211ENST00000549226 APBA3O96018 575 aa17.83■□□□□ 0.44
CACNB3-211ENST00000549226 GNAI3P08754 354 aa17.83■□□□□ 0.44
CACNB3-211ENST00000549226 ZBTB40Q9NUA8 1239 aa17.83■□□□□ 0.44
CACNB3-211ENST00000549226 COL5A3P25940 1745 aaPredicted RBP17.83■□□□□ 0.44
CACNB3-211ENST00000549226 MAP3K15Q6ZN16 1313 aa17.82■□□□□ 0.44
CACNB3-211ENST00000549226 PIP4K2AP48426 406 aaPredicted RBP17.82■□□□□ 0.44
CACNB3-211ENST00000549226 RGPD3A6NKT7 1758 aaPredicted RBP17.81■□□□□ 0.44
CACNB3-211ENST00000549226 RGPD4Q7Z3J3 1758 aa17.81■□□□□ 0.44
CACNB3-211ENST00000549226 N4BP2Q86UW6 1770 aaPredicted RBP17.81■□□□□ 0.44
CACNB3-211ENST00000549226 RPS6KA4O75676 772 aa17.81■□□□□ 0.44
CACNB3-211ENST00000549226 ADRA2BP18089 450 aa17.81■□□□□ 0.44
CACNB3-211ENST00000549226 TXNRD1Q16881 649 aa17.81■□□□□ 0.44
CACNB3-211ENST00000549226 TTLL7Q6ZT98 887 aa17.81■□□□□ 0.44
CACNB3-211ENST00000549226 COL15A1P39059 1388 aa17.8■□□□□ 0.44
CACNB3-211ENST00000549226 SF3B2Q13435 895 aaKnown RBP17.8■□□□□ 0.44
CACNB3-211ENST00000549226 DZIP3Q86Y13 1208 aaKnown RBP17.8■□□□□ 0.44
CACNB3-211ENST00000549226 CCDC125Q86Z20 511 aa17.8■□□□□ 0.44
CACNB3-211ENST00000549226 CCDC136Q96JN2 1154 aa17.8■□□□□ 0.44
CACNB3-211ENST00000549226 AK7Q96M32 723 aa17.8■□□□□ 0.44
CACNB3-211ENST00000549226 RTCBQ9Y3I0 505 aaKnown RBP17.8■□□□□ 0.44
CACNB3-211ENST00000549226 ZNF330Q9Y3S2 320 aaPredicted RBP17.8■□□□□ 0.44
CACNB3-211ENST00000549226 TRIM28Q13263 835 aaKnown RBP17.79■□□□□ 0.44
CACNB3-211ENST00000549226 ZNF652Q9Y2D9 606 aa17.79■□□□□ 0.44
CACNB3-211ENST00000549226 GIGYF2Q6Y7W6 1299 aaKnown RBP17.78■□□□□ 0.44
CACNB3-211ENST00000549226 MYD88Q99836 296 aa17.78■□□□□ 0.44
CACNB3-211ENST00000549226 NEURL1BA8MQ27 555 aa17.77■□□□□ 0.44
CACNB3-211ENST00000549226 GNPATO15228 680 aa17.77■□□□□ 0.44
CACNB3-211ENST00000549226 GNAI2P04899 355 aa17.77■□□□□ 0.44
CACNB3-211ENST00000549226 UBTFL1P0CB47 393 aaPredicted RBP17.77■□□□□ 0.44
CACNB3-211ENST00000549226 TCIRG1Q13488 830 aa17.77■□□□□ 0.44
CACNB3-211ENST00000549226 CLEC4GQ6UXB4 293 aa17.77■□□□□ 0.44
CACNB3-211ENST00000549226 CCDC191Q8NCU4 936 aa17.77■□□□□ 0.44
CACNB3-211ENST00000549226 ZBTB3Q9H5J0 574 aa17.77■□□□□ 0.44
CACNB3-211ENST00000549226 LRRC4BQ9NT99 713 aa17.77■□□□□ 0.44
CACNB3-211ENST00000549226 TNS1Q9HBL0 1735 aaKnown RBP17.77■□□□□ 0.44
CACNB3-211ENST00000549226 UTYO14607 1347 aa17.76■□□□□ 0.43
CACNB3-211ENST00000549226 C4BP0C0L5 1744 aa17.76■□□□□ 0.43
CACNB3-211ENST00000549226 IGKV5-2P06315 115 aa17.76■□□□□ 0.43
CACNB3-211ENST00000549226 SSFA2P28290 1259 aa17.76■□□□□ 0.43
CACNB3-211ENST00000549226 BAG6P46379 1132 aa17.76■□□□□ 0.43
CACNB3-211ENST00000549226 MEIS3Q99687 375 aa17.76■□□□□ 0.43
CACNB3-211ENST00000549226 C9orf78Q9NZ63 289 aaPredicted RBP17.76■□□□□ 0.43
CACNB3-211ENST00000549226 GRM8O00222 908 aa17.75■□□□□ 0.43
CACNB3-211ENST00000549226 CAMTA2O94983 1202 aa17.75■□□□□ 0.43
CACNB3-211ENST00000549226 GCKRQ14397 625 aa17.75■□□□□ 0.43
CACNB3-211ENST00000549226 RPAP2Q8IXW5 612 aaPredicted RBP17.75■□□□□ 0.43
CACNB3-211ENST00000549226 ISCA1Q9BUE6 129 aa17.75■□□□□ 0.43
CACNB3-211ENST00000549226 USP44Q9H0E7 712 aa17.75■□□□□ 0.43
CACNB3-211ENST00000549226 CWC25Q9NXE8 425 aaPredicted RBP17.75■□□□□ 0.43
CACNB3-211ENST00000549226 KCNQ4P56696 695 aa17.74■□□□□ 0.43
CACNB3-211ENST00000549226 HDAC1Q13547 482 aaPredicted RBP17.74■□□□□ 0.43
CACNB3-211ENST00000549226 PROM2Q8N271 834 aa17.74■□□□□ 0.43
CACNB3-211ENST00000549226 FLAD1Q8NFF5 587 aa17.74■□□□□ 0.43
CACNB3-211ENST00000549226 ARXQ96QS3 562 aa17.74■□□□□ 0.43
CACNB3-211ENST00000549226 RWDD1Q9H446 243 aaPredicted RBP17.74■□□□□ 0.43
CACNB3-211ENST00000549226 NARFQ9UHQ1 456 aa17.74■□□□□ 0.43
CACNB3-211ENST00000549226 NUP188Q5SRE5 1749 aa17.74■□□□□ 0.43
CACNB3-211ENST00000549226 ARFGEF2Q9Y6D5 1785 aa17.74■□□□□ 0.43
CACNB3-211ENST00000549226 CWF19L2Q2TBE0 894 aaKnown RBP17.73■□□□□ 0.43
CACNB3-211ENST00000549226 PARP10Q53GL7 1025 aa17.73■□□□□ 0.43
CACNB3-211ENST00000549226 TRAPPC3LQ5T215 181 aa17.73■□□□□ 0.43
CACNB3-211ENST00000549226 CENPQQ7L2Z9 268 aaPredicted RBP17.73■□□□□ 0.43
CACNB3-211ENST00000549226 TBC1D2BQ9UPU7 963 aa17.73■□□□□ 0.43
CACNB3-211ENST00000549226 MYH14Q7Z406 1995 aaKnown RBP17.73■□□□□ 0.43
CACNB3-211ENST00000549226 TAF1LQ8IZX4 1826 aa17.72■□□□□ 0.43
CACNB3-211ENST00000549226 ZPR1O75312 459 aa17.72■□□□□ 0.43
CACNB3-211ENST00000549226 HMMRO75330 724 aa17.72■□□□□ 0.43
CACNB3-211ENST00000549226 B4GALNT3Q6L9W6 998 aa17.72■□□□□ 0.43
CACNB3-211ENST00000549226 CAMKK2Q96RR4 588 aa17.72■□□□□ 0.43
CACNB3-211ENST00000549226 PCDHB15Q9Y5E8 787 aa17.72■□□□□ 0.43
CACNB3-211ENST00000549226 HSP90B1P14625 803 aaKnown RBP17.71■□□□□ 0.43
CACNB3-211ENST00000549226 RFC4P35249 363 aa17.71■□□□□ 0.43
CACNB3-211ENST00000549226 ATP5J2-PTCD1G3V325 749 aa17.7■□□□□ 0.42
CACNB3-211ENST00000549226 HLFQ16534 295 aa17.7■□□□□ 0.42
CACNB3-211ENST00000549226 ZNF34Q8IZ26 560 aa17.7■□□□□ 0.42
CACNB3-211ENST00000549226 ANKRD44Q8N8A2 993 aa17.7■□□□□ 0.42
CACNB3-211ENST00000549226 AKT1S1Q96B36 256 aa17.7■□□□□ 0.42
CACNB3-211ENST00000549226 USP42Q9H9J4 1324 aaKnown RBP17.7■□□□□ 0.42
CACNB3-211ENST00000549226 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.69■□□□□ 0.42
CACNB3-211ENST00000549226 H7C1W4 665 aa17.69■□□□□ 0.42
CACNB3-211ENST00000549226 NBPF7P0C2Y1 421 aaPredicted RBP17.69■□□□□ 0.42
CACNB3-211ENST00000549226 CEP85Q6P2H3 762 aa17.69■□□□□ 0.42
CACNB3-211ENST00000549226 NLRP10Q86W26 655 aa17.69■□□□□ 0.42
CACNB3-211ENST00000549226 ARHGEF1Q92888 912 aaKnown RBP17.69■□□□□ 0.42
CACNB3-211ENST00000549226 KDM2BQ8NHM5 1336 aa17.69■□□□□ 0.42
CACNB3-211ENST00000549226 PCCAP05165 728 aaPredicted RBP17.68■□□□□ 0.42
CACNB3-211ENST00000549226 MTX1Q13505 466 aa17.68■□□□□ 0.42
CACNB3-211ENST00000549226 ZBTB38Q8NAP3 1195 aaPredicted RBP17.68■□□□□ 0.42
CACNB3-211ENST00000549226 LRRFIP2Q9Y608 721 aaKnown RBP17.68■□□□□ 0.42
CACNB3-211ENST00000549226 SCN7AQ01118 1682 aa17.67■□□□□ 0.42
CACNB3-211ENST00000549226 BCORQ6W2J9 1755 aa17.67■□□□□ 0.42
CACNB3-211ENST00000549226 EN1Q05925 392 aaPredicted RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms