RNA–Protein interactions for RNA: ENST00000549194.1

GNPTAB-204, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 570 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-204ENST00000549194 SMPD1P17405 629 aa10.55□□□□□ -0.72
GNPTAB-204ENST00000549194 TMEM132EQ6IEE7 984 aa10.55□□□□□ -0.72
GNPTAB-204ENST00000549194 IRF7Q92985 503 aa10.55□□□□□ -0.72
GNPTAB-204ENST00000549194 C14orf93Q9H972 538 aaKnown RBP10.55□□□□□ -0.72
GNPTAB-204ENST00000549194 STK26Q9P289 416 aa10.55□□□□□ -0.72
GNPTAB-204ENST00000549194 NXF1Q9UBU9 619 aaKnown RBP10.55□□□□□ -0.72
GNPTAB-204ENST00000549194 VIRMAQ69YN4 1812 aaKnown RBP10.55□□□□□ -0.72
GNPTAB-204ENST00000549194 SBNO2Q9Y2G9 1366 aa10.54□□□□□ -0.72
GNPTAB-204ENST00000549194 ADGRB1O14514 1584 aa10.54□□□□□ -0.72
GNPTAB-204ENST00000549194 PTCH1Q13635 1447 aa10.54□□□□□ -0.72
GNPTAB-204ENST00000549194 C14orf37Q86TY3 774 aa10.54□□□□□ -0.72
GNPTAB-204ENST00000549194 NPAS3Q8IXF0 933 aa10.54□□□□□ -0.72
GNPTAB-204ENST00000549194 CENPJQ9HC77 1338 aaPredicted RBP10.54□□□□□ -0.72
GNPTAB-204ENST00000549194 YTHDC2Q9H6S0 1430 aaKnown RBP10.53□□□□□ -0.72
GNPTAB-204ENST00000549194 UBAP1LF5GYI3 381 aa10.53□□□□□ -0.72
GNPTAB-204ENST00000549194 APAF1O14727 1248 aa10.53□□□□□ -0.72
GNPTAB-204ENST00000549194 HOXA2O43364 376 aa10.53□□□□□ -0.72
GNPTAB-204ENST00000549194 RGS3P49796 1198 aa10.53□□□□□ -0.72
GNPTAB-204ENST00000549194 SKAP1Q86WV1 359 aa10.53□□□□□ -0.72
GNPTAB-204ENST00000549194 PMFBP1Q8TBY8 1022 aa10.53□□□□□ -0.72
GNPTAB-204ENST00000549194 FCF1Q9Y324 198 aaKnown RBP10.53□□□□□ -0.72
GNPTAB-204ENST00000549194 ARHGEF28Q8N1W1 1705 aaKnown RBP10.53□□□□□ -0.72
GNPTAB-204ENST00000549194 MSH6P52701 1360 aa10.52□□□□□ -0.72
GNPTAB-204ENST00000549194 ROBO2Q9HCK4 1378 aa10.52□□□□□ -0.72
GNPTAB-204ENST00000549194 GJA5P36382 358 aa10.52□□□□□ -0.73
GNPTAB-204ENST00000549194 SH3D19Q5HYK7 790 aa10.52□□□□□ -0.73
GNPTAB-204ENST00000549194 MYSM1Q5VVJ2 828 aa10.52□□□□□ -0.73
GNPTAB-204ENST00000549194 SNIP1Q8TAD8 396 aaKnown RBP10.52□□□□□ -0.73
GNPTAB-204ENST00000549194 FBXO41Q8TF61 875 aa10.52□□□□□ -0.73
GNPTAB-204ENST00000549194 FRAT1Q92837 279 aaPredicted RBP10.52□□□□□ -0.73
GNPTAB-204ENST00000549194 CLUAP1Q96AJ1 413 aa10.52□□□□□ -0.73
GNPTAB-204ENST00000549194 GOPCQ9HD26 462 aa10.52□□□□□ -0.73
GNPTAB-204ENST00000549194 TECPR2O15040 1411 aa10.51□□□□□ -0.73
GNPTAB-204ENST00000549194 NCOA3Q9Y6Q9 1424 aa10.51□□□□□ -0.73
GNPTAB-204ENST00000549194 CANXP27824 592 aaKnown RBP10.51□□□□□ -0.73
GNPTAB-204ENST00000549194 SKIV2LQ15477 1246 aaKnown RBP10.51□□□□□ -0.73
GNPTAB-204ENST00000549194 TMEM132AQ24JP5 1023 aa10.51□□□□□ -0.73
GNPTAB-204ENST00000549194 MORN1Q5T089 497 aa10.51□□□□□ -0.73
GNPTAB-204ENST00000549194 CCDC146Q8IYE0 955 aa10.51□□□□□ -0.73
GNPTAB-204ENST00000549194 MOXD2PA6NHM9 499 aa10.5□□□□□ -0.73
GNPTAB-204ENST00000549194 TOM1O60784 492 aa10.5□□□□□ -0.73
GNPTAB-204ENST00000549194 PUS10Q3MIT2 529 aaKnown RBP10.5□□□□□ -0.73
GNPTAB-204ENST00000549194 UPF2Q9HAU5 1272 aaKnown RBP10.5□□□□□ -0.73
GNPTAB-204ENST00000549194 ABCC11Q96J66 1382 aa10.5□□□□□ -0.73
GNPTAB-204ENST00000549194 DLC1Q96QB1 1528 aa10.49□□□□□ -0.73
GNPTAB-204ENST00000549194 WNT7AO00755 349 aa10.49□□□□□ -0.73
GNPTAB-204ENST00000549194 SPTLC1O15269 473 aa10.49□□□□□ -0.73
GNPTAB-204ENST00000549194 BCAR3O75815 825 aa10.49□□□□□ -0.73
GNPTAB-204ENST00000549194 PIP4K2BP78356 416 aa10.49□□□□□ -0.73
GNPTAB-204ENST00000549194 RSBN1LQ6PCB5 846 aaPredicted RBP10.49□□□□□ -0.73
GNPTAB-204ENST00000549194 RIC3Q7Z5B4 369 aa10.49□□□□□ -0.73
GNPTAB-204ENST00000549194 WAPLQ7Z5K2 1190 aa10.49□□□□□ -0.73
GNPTAB-204ENST00000549194 WDR63Q8IWG1 891 aa10.49□□□□□ -0.73
GNPTAB-204ENST00000549194 ADGRL3Q9HAR2 1447 aa10.49□□□□□ -0.73
GNPTAB-204ENST00000549194 USP32Q8NFA0 1604 aa10.48□□□□□ -0.73
GNPTAB-204ENST00000549194 ROBO1Q9Y6N7 1651 aa10.48□□□□□ -0.73
GNPTAB-204ENST00000549194 RGPD8O14715 1765 aaPredicted RBP10.48□□□□□ -0.73
GNPTAB-204ENST00000549194 FRAT2O75474 233 aaPredicted RBP10.48□□□□□ -0.73
GNPTAB-204ENST00000549194 FDX1P10109 184 aa10.48□□□□□ -0.73
GNPTAB-204ENST00000549194 ATF3P18847 181 aa10.48□□□□□ -0.73
GNPTAB-204ENST00000549194 NDUFV2P19404 249 aa10.48□□□□□ -0.73
GNPTAB-204ENST00000549194 CCDC27Q2M243 656 aa10.48□□□□□ -0.73
GNPTAB-204ENST00000549194 L1TD1Q5T7N2 865 aaKnown RBP10.48□□□□□ -0.73
GNPTAB-204ENST00000549194 WWC1Q8IX03 1113 aa10.48□□□□□ -0.73
GNPTAB-204ENST00000549194 RUNDC1Q96C34 613 aa10.48□□□□□ -0.73
GNPTAB-204ENST00000549194 C19orf44Q9H6X5 657 aa10.48□□□□□ -0.73
GNPTAB-204ENST00000549194 POLR3EQ9NVU0 708 aa10.48□□□□□ -0.73
GNPTAB-204ENST00000549194 TRAK1Q9UPV9 953 aa10.48□□□□□ -0.73
GNPTAB-204ENST00000549194 QRICH2Q9H0J4 1663 aa10.47□□□□□ -0.73
GNPTAB-204ENST00000549194 IGHDP01880 384 aa10.47□□□□□ -0.73
GNPTAB-204ENST00000549194 CLK2P49760 499 aaKnown RBP10.47□□□□□ -0.73
GNPTAB-204ENST00000549194 Q3C1V9 767 aa10.47□□□□□ -0.73
GNPTAB-204ENST00000549194 FAM43AQ8N2R8 423 aa10.47□□□□□ -0.73
GNPTAB-204ENST00000549194 PUS7Q96PZ0 661 aaKnown RBP10.47□□□□□ -0.73
GNPTAB-204ENST00000549194 PRAM1Q96QH2 718 aa10.47□□□□□ -0.73
GNPTAB-204ENST00000549194 BRPF3Q9ULD4 1205 aa10.47□□□□□ -0.73
GNPTAB-204ENST00000549194 SLC27A5Q9Y2P5 690 aa10.47□□□□□ -0.73
GNPTAB-204ENST00000549194 USP19O94966 1318 aa10.47□□□□□ -0.73
GNPTAB-204ENST00000549194 FAM135BQ49AJ0 1406 aa10.47□□□□□ -0.73
GNPTAB-204ENST00000549194 CDC42BPGQ6DT37 1551 aa10.47□□□□□ -0.73
GNPTAB-204ENST00000549194 CT47B1P0C2W7 299 aaPredicted RBP10.46□□□□□ -0.73
GNPTAB-204ENST00000549194 SAFB2Q14151 953 aaKnown RBP eCLIP10.46□□□□□ -0.73
GNPTAB-204ENST00000549194 TUSC1Q2TAM9 212 aa10.46□□□□□ -0.73
GNPTAB-204ENST00000549194 CFAP53Q96M91 514 aa10.46□□□□□ -0.73
GNPTAB-204ENST00000549194 PCMTD1Q96MG8 357 aaPredicted RBP10.46□□□□□ -0.73
GNPTAB-204ENST00000549194 CARD14Q9BXL6 1004 aa10.46□□□□□ -0.73
GNPTAB-204ENST00000549194 RWDD1Q9H446 243 aaPredicted RBP10.46□□□□□ -0.73
GNPTAB-204ENST00000549194 POGKQ9P215 609 aa10.46□□□□□ -0.73
GNPTAB-204ENST00000549194 DCCP43146 1447 aa10.46□□□□□ -0.74
GNPTAB-204ENST00000549194 FMN2Q9NZ56 1722 aa10.46□□□□□ -0.74
GNPTAB-204ENST00000549194 NSD2O96028 1365 aa10.45□□□□□ -0.74
GNPTAB-204ENST00000549194 ZBTB24O43167 697 aaPredicted RBP10.45□□□□□ -0.74
GNPTAB-204ENST00000549194 RARSP54136 660 aaKnown RBP10.45□□□□□ -0.74
GNPTAB-204ENST00000549194 MORC1Q86VD1 984 aa10.45□□□□□ -0.74
GNPTAB-204ENST00000549194 HLA-CQ95604 372 aa10.45□□□□□ -0.74
GNPTAB-204ENST00000549194 SIRT1Q96EB6 747 aa10.45□□□□□ -0.74
GNPTAB-204ENST00000549194 MYH16Q9H6N6 1097 aa10.45□□□□□ -0.74
GNPTAB-204ENST00000549194 SHPRHQ149N8 1683 aa10.44□□□□□ -0.74
GNPTAB-204ENST00000549194 GUCA2AQ02747 115 aa10.44□□□□□ -0.74
GNPTAB-204ENST00000549194 KCNMA1Q12791 1236 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms