RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 DNAJC10Q8IXB1 793 aa11.57□□□□□ -0.56
TROAP-208ENST00000548817 NFATC2IPQ8NCF5 419 aa11.57□□□□□ -0.56
TROAP-208ENST00000548817 ZNF219Q9P2Y4 722 aaPredicted RBP11.57□□□□□ -0.56
TROAP-208ENST00000548817 CASP8AP2Q9UKL3 1982 aa11.57□□□□□ -0.56
TROAP-208ENST00000548817 SCN11AQ9UI33 1791 aa11.56□□□□□ -0.56
TROAP-208ENST00000548817 CCDC93Q567U6 631 aa11.56□□□□□ -0.56
TROAP-208ENST00000548817 C1orf141Q5JVX7 400 aa11.56□□□□□ -0.56
TROAP-208ENST00000548817 CYP4F22Q6NT55 531 aa11.56□□□□□ -0.56
TROAP-208ENST00000548817 GPC2Q8N158 579 aa11.56□□□□□ -0.56
TROAP-208ENST00000548817 GCC1Q96CN9 775 aa11.56□□□□□ -0.56
TROAP-208ENST00000548817 HHIPL1Q96JK4 782 aa11.56□□□□□ -0.56
TROAP-208ENST00000548817 TLL2Q9Y6L7 1015 aa11.56□□□□□ -0.56
TROAP-208ENST00000548817 ZNF541Q9H0D2 1346 aa11.56□□□□□ -0.56
TROAP-208ENST00000548817 SCN7AQ01118 1682 aa11.55□□□□□ -0.56
TROAP-208ENST00000548817 CACNA1SQ13698 1873 aa11.55□□□□□ -0.56
TROAP-208ENST00000548817 A0A087WZG4 1122 aa11.55□□□□□ -0.56
TROAP-208ENST00000548817 FKBP4Q02790 459 aaKnown RBP eCLIP11.55□□□□□ -0.56
TROAP-208ENST00000548817 PRR5LQ6MZQ0 368 aa11.55□□□□□ -0.56
TROAP-208ENST00000548817 MORC1Q86VD1 984 aa11.55□□□□□ -0.56
TROAP-208ENST00000548817 MASTLQ96GX5 879 aa11.55□□□□□ -0.56
TROAP-208ENST00000548817 PANK3Q9H999 370 aa11.55□□□□□ -0.56
TROAP-208ENST00000548817 TSKSQ9UJT2 592 aa11.55□□□□□ -0.56
TROAP-208ENST00000548817 ZBTB1Q9Y2K1 713 aa11.55□□□□□ -0.56
TROAP-208ENST00000548817 RNF123Q5XPI4 1314 aa11.55□□□□□ -0.56
TROAP-208ENST00000548817 SRGNP10124 158 aa11.54□□□□□ -0.56
TROAP-208ENST00000548817 VSIG10Q8N0Z9 540 aa11.54□□□□□ -0.56
TROAP-208ENST00000548817 C7orf43Q8WVR3 580 aa11.54□□□□□ -0.56
TROAP-208ENST00000548817 MRC1P22897 1456 aa11.53□□□□□ -0.56
TROAP-208ENST00000548817 FZD9O00144 591 aa11.53□□□□□ -0.56
TROAP-208ENST00000548817 GRM1Q13255 1194 aa11.53□□□□□ -0.56
TROAP-208ENST00000548817 KNSTRNQ9Y448 316 aa11.53□□□□□ -0.56
TROAP-208ENST00000548817 HSPA5P11021 654 aaKnown RBP11.52□□□□□ -0.57
TROAP-208ENST00000548817 LMOD1P29536 600 aaPredicted RBP11.52□□□□□ -0.57
TROAP-208ENST00000548817 EIF5P55010 431 aaKnown RBP11.52□□□□□ -0.57
TROAP-208ENST00000548817 ST5P78524 1137 aa11.52□□□□□ -0.57
TROAP-208ENST00000548817 BICDL1Q6ZP65 573 aa11.52□□□□□ -0.57
TROAP-208ENST00000548817 RTKN2Q8IZC4 609 aa11.52□□□□□ -0.57
TROAP-208ENST00000548817 CNBD1Q8NA66 436 aa11.52□□□□□ -0.57
TROAP-208ENST00000548817 BCORQ6W2J9 1755 aa11.51□□□□□ -0.57
TROAP-208ENST00000548817 AOC2O75106 756 aa11.51□□□□□ -0.57
TROAP-208ENST00000548817 CST9Q5W186 159 aa11.51□□□□□ -0.57
TROAP-208ENST00000548817 TBC1D9BQ66K14 1250 aa11.51□□□□□ -0.57
TROAP-208ENST00000548817 USP50Q70EL3 339 aaPredicted RBP11.51□□□□□ -0.57
TROAP-208ENST00000548817 SAPCD2Q86UD0 394 aa11.51□□□□□ -0.57
TROAP-208ENST00000548817 SLC52A2Q9HAB3 445 aa11.51□□□□□ -0.57
TROAP-208ENST00000548817 STARD3NLO95772 234 aa11.5□□□□□ -0.57
TROAP-208ENST00000548817 IARSP41252 1262 aaKnown RBP11.5□□□□□ -0.57
TROAP-208ENST00000548817 SOX10P56693 466 aa11.5□□□□□ -0.57
TROAP-208ENST00000548817 SULT6B1Q6IMI4 303 aa11.5□□□□□ -0.57
TROAP-208ENST00000548817 ZNF277Q9NRM2 450 aaPredicted RBP11.5□□□□□ -0.57
TROAP-208ENST00000548817 UBR2Q8IWV8 1755 aa11.49□□□□□ -0.57
TROAP-208ENST00000548817 NPHP1O15259 732 aa11.49□□□□□ -0.57
TROAP-208ENST00000548817 NPR1P16066 1061 aa11.49□□□□□ -0.57
TROAP-208ENST00000548817 NOGQ13253 232 aa11.49□□□□□ -0.57
TROAP-208ENST00000548817 NBPF15Q8N660 670 aa11.49□□□□□ -0.57
TROAP-208ENST00000548817 CCER1Q8TC90 406 aaPredicted RBP11.49□□□□□ -0.57
TROAP-208ENST00000548817 JDP2Q8WYK2 163 aa11.49□□□□□ -0.57
TROAP-208ENST00000548817 SETDB2Q96T68 719 aa11.49□□□□□ -0.57
TROAP-208ENST00000548817 SAGE1Q9NXZ1 904 aa11.49□□□□□ -0.57
TROAP-208ENST00000548817 CANXP27824 592 aaKnown RBP11.48□□□□□ -0.57
TROAP-208ENST00000548817 EIF6P56537 245 aaKnown RBP11.48□□□□□ -0.57
TROAP-208ENST00000548817 AKAP4Q5JQC9 854 aa11.48□□□□□ -0.57
TROAP-208ENST00000548817 KLRG2A4D1S0 409 aaPredicted RBP11.47□□□□□ -0.57
TROAP-208ENST00000548817 CIAPIN1Q6FI81 312 aa11.47□□□□□ -0.57
TROAP-208ENST00000548817 AEBP1Q8IUX7 1158 aa11.47□□□□□ -0.57
TROAP-208ENST00000548817 CCDC24Q8N4L8 307 aa11.47□□□□□ -0.57
TROAP-208ENST00000548817 PSMD1Q99460 953 aa11.47□□□□□ -0.57
TROAP-208ENST00000548817 TRAF5O00463 557 aa11.46□□□□□ -0.57
TROAP-208ENST00000548817 IL6STP40189 918 aaPredicted RBP11.46□□□□□ -0.57
TROAP-208ENST00000548817 SCNN1DP51172 638 aa11.46□□□□□ -0.57
TROAP-208ENST00000548817 FMR1Q06787 632 aaKnown RBP eCLIP11.46□□□□□ -0.57
TROAP-208ENST00000548817 CC2D2BQ6DHV5 1058 aa11.46□□□□□ -0.57
TROAP-208ENST00000548817 TEX13AQ9BXU3 409 aaPredicted RBP11.46□□□□□ -0.57
TROAP-208ENST00000548817 SNED1Q8TER0 1413 aa11.45□□□□□ -0.58
TROAP-208ENST00000548817 CELF2O95319 508 aaKnown RBP11.45□□□□□ -0.58
TROAP-208ENST00000548817 ALDH1B1P30837 517 aa11.45□□□□□ -0.58
TROAP-208ENST00000548817 GRIPAP1Q4V328 841 aa11.45□□□□□ -0.58
TROAP-208ENST00000548817 NPM2Q86SE8 214 aaKnown RBP11.45□□□□□ -0.58
TROAP-208ENST00000548817 SYNE4Q8N205 404 aa11.45□□□□□ -0.58
TROAP-208ENST00000548817 GJA3Q9Y6H8 435 aa11.45□□□□□ -0.58
TROAP-208ENST00000548817 IL13P35225 146 aa11.44□□□□□ -0.58
TROAP-208ENST00000548817 EPS15P42566 896 aa11.44□□□□□ -0.58
TROAP-208ENST00000548817 SLC39A6Q13433 755 aa11.44□□□□□ -0.58
TROAP-208ENST00000548817 ADARB2Q9NS39 739 aaKnown RBP11.44□□□□□ -0.58
TROAP-208ENST00000548817 RGL2O15211 777 aa11.43□□□□□ -0.58
TROAP-208ENST00000548817 CAMTA2O94983 1202 aa11.43□□□□□ -0.58
TROAP-208ENST00000548817 HABP4Q5JVS0 413 aaKnown RBP11.43□□□□□ -0.58
TROAP-208ENST00000548817 CTU1Q7Z7A3 348 aaKnown RBP11.43□□□□□ -0.58
TROAP-208ENST00000548817 ZC3H15Q8WU90 426 aaKnown RBP11.43□□□□□ -0.58
TROAP-208ENST00000548817 PGAP2Q9UHJ9 254 aa11.43□□□□□ -0.58
TROAP-208ENST00000548817 TBC1D2BQ9UPU7 963 aa11.43□□□□□ -0.58
TROAP-208ENST00000548817 CDHR2Q9BYE9 1310 aa11.42□□□□□ -0.58
TROAP-208ENST00000548817 RNMTO43148 476 aaKnown RBP11.42□□□□□ -0.58
TROAP-208ENST00000548817 PKN2Q16513 984 aaKnown RBP11.42□□□□□ -0.58
TROAP-208ENST00000548817 CLEC4GQ6UXB4 293 aa11.42□□□□□ -0.58
TROAP-208ENST00000548817 NBPF5PQ86XG9 351 aaPredicted RBP11.42□□□□□ -0.58
TROAP-208ENST00000548817 TTC5Q8N0Z6 440 aa11.42□□□□□ -0.58
TROAP-208ENST00000548817 COL4A5P29400 1685 aa11.41□□□□□ -0.58
TROAP-208ENST00000548817 DIAPH1O60610 1272 aaKnown RBP11.41□□□□□ -0.58
TROAP-208ENST00000548817 HMOX1P09601 288 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms