RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 PLBD2Q8NHP8 589 aa25.76■■□□□ 1.71
RITA1-201ENST00000548278 AOX1Q06278 1338 aa25.76■■□□□ 1.71
RITA1-201ENST00000548278 BICC1Q9H694 974 aaKnown RBP25.76■■□□□ 1.71
RITA1-201ENST00000548278 WNK3Q9BYP7 1800 aa25.75■■□□□ 1.71
RITA1-201ENST00000548278 CASC1Q6TDU7 716 aa25.75■■□□□ 1.71
RITA1-201ENST00000548278 KIF2CQ99661 725 aa25.75■■□□□ 1.71
RITA1-201ENST00000548278 ITGB4P16144 1822 aa25.74■■□□□ 1.71
RITA1-201ENST00000548278 AFDNP55196 1824 aaKnown RBP25.74■■□□□ 1.71
RITA1-201ENST00000548278 A1BGP04217 495 aa25.74■■□□□ 1.71
RITA1-201ENST00000548278 PIGBQ92521 554 aa25.74■■□□□ 1.71
RITA1-201ENST00000548278 NUTM1Q86Y26 1132 aa25.73■■□□□ 1.71
RITA1-201ENST00000548278 PA2G4Q9UQ80 394 aaKnown RBP25.72■■□□□ 1.71
RITA1-201ENST00000548278 NRAPQ86VF7 1730 aa25.71■■□□□ 1.71
RITA1-201ENST00000548278 LRP6O75581 1613 aa25.71■■□□□ 1.71
RITA1-201ENST00000548278 ADAMTS2O95450 1211 aa25.71■■□□□ 1.71
RITA1-201ENST00000548278 ASAP1Q9ULH1 1129 aa25.71■■□□□ 1.71
RITA1-201ENST00000548278 NUP188Q5SRE5 1749 aa25.71■■□□□ 1.71
RITA1-201ENST00000548278 OS9Q13438 667 aaPredicted RBP25.7■■□□□ 1.71
RITA1-201ENST00000548278 TTLL7Q6ZT98 887 aa25.7■■□□□ 1.71
RITA1-201ENST00000548278 USP26Q9BXU7 913 aa25.7■■□□□ 1.71
RITA1-201ENST00000548278 EXOC5O00471 708 aa25.7■■□□□ 1.7
RITA1-201ENST00000548278 COL15A1P39059 1388 aa25.69■■□□□ 1.7
RITA1-201ENST00000548278 EPHA10Q5JZY3 1008 aa25.69■■□□□ 1.7
RITA1-201ENST00000548278 ATG3Q9NT62 314 aa25.69■■□□□ 1.7
RITA1-201ENST00000548278 ATP5J2-PTCD1G3V325 749 aa25.68■■□□□ 1.7
RITA1-201ENST00000548278 ERC1Q8IUD2 1116 aa25.68■■□□□ 1.7
RITA1-201ENST00000548278 VSIG10Q8N0Z9 540 aa25.68■■□□□ 1.7
RITA1-201ENST00000548278 SNX21Q969T3 373 aa25.68■■□□□ 1.7
RITA1-201ENST00000548278 TOM1O60784 492 aa25.68■■□□□ 1.7
RITA1-201ENST00000548278 PI4K2BQ8TCG2 481 aa25.68■■□□□ 1.7
RITA1-201ENST00000548278 BCL9O00512 1426 aa25.67■■□□□ 1.7
RITA1-201ENST00000548278 USP42Q9H9J4 1324 aaKnown RBP25.67■■□□□ 1.7
RITA1-201ENST00000548278 SPATA31A1Q5TZJ5 1347 aa25.67■■□□□ 1.7
RITA1-201ENST00000548278 ERC2O15083 957 aa25.66■■□□□ 1.7
RITA1-201ENST00000548278 CASP7P55210 303 aa25.66■■□□□ 1.7
RITA1-201ENST00000548278 PIP4K2BP78356 416 aa25.66■■□□□ 1.7
RITA1-201ENST00000548278 TRIM6-TRIM34B2RNG4 842 aa25.65■■□□□ 1.7
RITA1-201ENST00000548278 UBE3BQ7Z3V4 1068 aa25.65■■□□□ 1.7
RITA1-201ENST00000548278 UNC5CLQ8IV45 518 aa25.65■■□□□ 1.7
RITA1-201ENST00000548278 CLASRPQ8N2M8 674 aaKnown RBP25.65■■□□□ 1.7
RITA1-201ENST00000548278 JARID2Q92833 1246 aaPredicted RBP25.65■■□□□ 1.7
RITA1-201ENST00000548278 CDCA7Q9BWT1 371 aaPredicted RBP25.65■■□□□ 1.7
RITA1-201ENST00000548278 TEX13AQ9BXU3 409 aaPredicted RBP25.65■■□□□ 1.7
RITA1-201ENST00000548278 ANTXR1Q9H6X2 564 aa25.65■■□□□ 1.7
RITA1-201ENST00000548278 A0A087WZG4 1122 aa25.65■■□□□ 1.7
RITA1-201ENST00000548278 REC8O95072 547 aa25.65■■□□□ 1.7
RITA1-201ENST00000548278 HSCBQ8IWL3 235 aa25.65■■□□□ 1.7
RITA1-201ENST00000548278 RABL6Q3YEC7 729 aaPredicted RBP25.64■■□□□ 1.7
RITA1-201ENST00000548278 DNAJC10Q8IXB1 793 aa25.64■■□□□ 1.7
RITA1-201ENST00000548278 RILPL2Q969X0 211 aa25.64■■□□□ 1.7
RITA1-201ENST00000548278 THRAP3Q9Y2W1 955 aaKnown RBP25.64■■□□□ 1.7
RITA1-201ENST00000548278 CHMLP26374 656 aa25.64■■□□□ 1.69
RITA1-201ENST00000548278 SASH1O94885 1247 aa25.63■■□□□ 1.69
RITA1-201ENST00000548278 G3BP1Q13283 466 aaKnown RBP eCLIP25.63■■□□□ 1.69
RITA1-201ENST00000548278 SLKQ9H2G2 1235 aaPredicted RBP25.63■■□□□ 1.69
RITA1-201ENST00000548278 TTC41PQ6P2S7 1318 aa25.63■■□□□ 1.69
RITA1-201ENST00000548278 KAT6BQ8WYB5 2073 aa25.62■■□□□ 1.69
RITA1-201ENST00000548278 NUTM2BA6NNL0 878 aaPredicted RBP25.62■■□□□ 1.69
RITA1-201ENST00000548278 NUTM2EB1AL46 878 aaPredicted RBP25.62■■□□□ 1.69
RITA1-201ENST00000548278 NUTM2AQ8IVF1 878 aaPredicted RBP25.62■■□□□ 1.69
RITA1-201ENST00000548278 ESYT1Q9BSJ8 1104 aa25.62■■□□□ 1.69
RITA1-201ENST00000548278 H7C1W4 665 aa25.62■■□□□ 1.69
RITA1-201ENST00000548278 ZBTB3Q9H5J0 574 aa25.61■■□□□ 1.69
RITA1-201ENST00000548278 NWD2Q9ULI1 1742 aa25.61■■□□□ 1.69
RITA1-201ENST00000548278 AK9Q5TCS8 1911 aa25.61■■□□□ 1.69
RITA1-201ENST00000548278 TJP1Q07157 1748 aa25.61■■□□□ 1.69
RITA1-201ENST00000548278 RFX5P48382 616 aaPredicted RBP25.6■■□□□ 1.69
RITA1-201ENST00000548278 RBM42Q9BTD8 480 aaKnown RBP25.6■■□□□ 1.69
RITA1-201ENST00000548278 CWC25Q9NXE8 425 aaPredicted RBP25.6■■□□□ 1.69
RITA1-201ENST00000548278 COPRSQ9NQ92 184 aa25.6■■□□□ 1.69
RITA1-201ENST00000548278 SLIT2O94813 1529 aa25.59■■□□□ 1.69
RITA1-201ENST00000548278 STARD3NLO95772 234 aa25.59■■□□□ 1.69
RITA1-201ENST00000548278 NFKBIBQ15653 356 aa25.59■■□□□ 1.69
RITA1-201ENST00000548278 KLHDC4Q8TBB5 520 aa25.59■■□□□ 1.69
RITA1-201ENST00000548278 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.59■■□□□ 1.69
RITA1-201ENST00000548278 SPATA31A5Q5VU36 1347 aa25.59■■□□□ 1.69
RITA1-201ENST00000548278 SPATA31A7Q8IWB4 1347 aa25.59■■□□□ 1.69
RITA1-201ENST00000548278 RTL5Q5HYW3 569 aaPredicted RBP25.59■■□□□ 1.69
RITA1-201ENST00000548278 SLC4A9Q96Q91 983 aa25.59■■□□□ 1.69
RITA1-201ENST00000548278 DOT1LQ8TEK3 1739 aa25.58■■□□□ 1.69
RITA1-201ENST00000548278 GLRX3O76003 335 aaKnown RBP25.58■■□□□ 1.69
RITA1-201ENST00000548278 CCDC191Q8NCU4 936 aa25.58■■□□□ 1.69
RITA1-201ENST00000548278 SIL1Q9H173 461 aa25.58■■□□□ 1.69
RITA1-201ENST00000548278 IFIT2P09913 472 aaKnown RBP25.57■■□□□ 1.68
RITA1-201ENST00000548278 AACSQ86V21 672 aa25.57■■□□□ 1.68
RITA1-201ENST00000548278 ECHDC1Q9NTX5 307 aa25.57■■□□□ 1.68
RITA1-201ENST00000548278 CD2BP2O95400 341 aaKnown RBP25.57■■□□□ 1.68
RITA1-201ENST00000548278 MAP4K4O95819 1239 aaPredicted RBP25.57■■□□□ 1.68
RITA1-201ENST00000548278 PRIM1P49642 420 aaKnown RBP25.57■■□□□ 1.68
RITA1-201ENST00000548278 RABEP1Q15276 862 aa25.57■■□□□ 1.68
RITA1-201ENST00000548278 DDB1Q16531 1140 aa25.57■■□□□ 1.68
RITA1-201ENST00000548278 FOXO4P98177 505 aa25.56■■□□□ 1.68
RITA1-201ENST00000548278 PTPN12Q05209 780 aaKnown RBP25.56■■□□□ 1.68
RITA1-201ENST00000548278 SPRYD3Q8NCJ5 442 aa25.56■■□□□ 1.68
RITA1-201ENST00000548278 SYTL4Q96C24 671 aaPredicted RBP25.56■■□□□ 1.68
RITA1-201ENST00000548278 EAF2Q96CJ1 260 aaPredicted RBP25.56■■□□□ 1.68
RITA1-201ENST00000548278 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.56■■□□□ 1.68
RITA1-201ENST00000548278 ISCA1Q9BUE6 129 aa25.56■■□□□ 1.68
RITA1-201ENST00000548278 CNTROBQ8N137 903 aa25.55■■□□□ 1.68
RITA1-201ENST00000548278 GPATCH3Q96I76 525 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms