RNA–Protein interactions for RNA: ENST00000548161.1

R3HDM2-212, Transcript of R3H domain containing 2, humanhuman

TSL 3

Gene R3HDM2, Length 802 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-212ENST00000548161 CHADLQ6NUI6 762 aa11.37□□□□□ -0.59
R3HDM2-212ENST00000548161 PRPF40BQ6NWY9 871 aaKnown RBP11.37□□□□□ -0.59
R3HDM2-212ENST00000548161 CLEC4GQ6UXB4 293 aa11.37□□□□□ -0.59
R3HDM2-212ENST00000548161 DZIP3Q86Y13 1208 aaKnown RBP11.37□□□□□ -0.59
R3HDM2-212ENST00000548161 TNS4Q8IZW8 715 aa11.37□□□□□ -0.59
R3HDM2-212ENST00000548161 C7orf43Q8WVR3 580 aa11.37□□□□□ -0.59
R3HDM2-212ENST00000548161 MASTLQ96GX5 879 aa11.37□□□□□ -0.59
R3HDM2-212ENST00000548161 USP16Q9Y5T5 823 aa11.37□□□□□ -0.59
R3HDM2-212ENST00000548161 COL11A2P13942 1736 aaPredicted RBP11.37□□□□□ -0.59
R3HDM2-212ENST00000548161 NPHP1O15259 732 aa11.36□□□□□ -0.59
R3HDM2-212ENST00000548161 DDNO94850 711 aaPredicted RBP11.36□□□□□ -0.59
R3HDM2-212ENST00000548161 HSPA1AP0DMV8 641 aaKnown RBP11.36□□□□□ -0.59
R3HDM2-212ENST00000548161 HSPA1BP0DMV9 641 aaKnown RBP11.36□□□□□ -0.59
R3HDM2-212ENST00000548161 PRKAR2BP31323 418 aa11.36□□□□□ -0.59
R3HDM2-212ENST00000548161 CNGB1Q14028 1251 aaPredicted RBP11.36□□□□□ -0.59
R3HDM2-212ENST00000548161 RSPH6AQ9H0K4 717 aa11.36□□□□□ -0.59
R3HDM2-212ENST00000548161 PRAMEF22A3QJZ6 481 aa11.35□□□□□ -0.59
R3HDM2-212ENST00000548161 KLRG2A4D1S0 409 aaPredicted RBP11.35□□□□□ -0.59
R3HDM2-212ENST00000548161 SNRPA1P09661 255 aaKnown RBP11.35□□□□□ -0.59
R3HDM2-212ENST00000548161 NBPF5PQ86XG9 351 aaPredicted RBP11.35□□□□□ -0.59
R3HDM2-212ENST00000548161 CREBZFQ9NS37 354 aa11.35□□□□□ -0.59
R3HDM2-212ENST00000548161 RGL2O15211 777 aa11.34□□□□□ -0.59
R3HDM2-212ENST00000548161 POTEIP0CG38 1075 aa11.34□□□□□ -0.59
R3HDM2-212ENST00000548161 POTEJP0CG39 1038 aa11.34□□□□□ -0.59
R3HDM2-212ENST00000548161 NPR1P16066 1061 aa11.34□□□□□ -0.59
R3HDM2-212ENST00000548161 PIP4K2AP48426 406 aaPredicted RBP11.34□□□□□ -0.59
R3HDM2-212ENST00000548161 L3MBTL3Q96JM7 780 aaPredicted RBP11.34□□□□□ -0.59
R3HDM2-212ENST00000548161 CFAP53Q96M91 514 aa11.34□□□□□ -0.59
R3HDM2-212ENST00000548161 ZNF652Q9Y2D9 606 aa11.34□□□□□ -0.59
R3HDM2-212ENST00000548161 IQCA1LA6NCM1 817 aa11.33□□□□□ -0.6
R3HDM2-212ENST00000548161 NBPF26B4DH59 902 aa11.33□□□□□ -0.6
R3HDM2-212ENST00000548161 CAPN15O75808 1086 aa11.33□□□□□ -0.6
R3HDM2-212ENST00000548161 CCDC93Q567U6 631 aa11.33□□□□□ -0.6
R3HDM2-212ENST00000548161 NBPF10Q6P3W6 841 aaKnown RBP11.33□□□□□ -0.6
R3HDM2-212ENST00000548161 TPTE2Q6XPS3 522 aa11.33□□□□□ -0.6
R3HDM2-212ENST00000548161 MCM10Q7L590 875 aa11.33□□□□□ -0.6
R3HDM2-212ENST00000548161 NBPF15Q8N660 670 aa11.33□□□□□ -0.6
R3HDM2-212ENST00000548161 RTF1Q92541 710 aaKnown RBP11.33□□□□□ -0.6
R3HDM2-212ENST00000548161 NUDCQ9Y266 331 aa11.33□□□□□ -0.6
R3HDM2-212ENST00000548161 BCORQ6W2J9 1755 aa11.33□□□□□ -0.6
R3HDM2-212ENST00000548161 ARFGEF2Q9Y6D5 1785 aa11.32□□□□□ -0.6
R3HDM2-212ENST00000548161 HTATSF1O43719 755 aaKnown RBP11.32□□□□□ -0.6
R3HDM2-212ENST00000548161 U2AF1L5P0DN76 240 aaPredicted RBP11.32□□□□□ -0.6
R3HDM2-212ENST00000548161 U2AF1Q01081 240 aaKnown RBP eCLIP11.32□□□□□ -0.6
R3HDM2-212ENST00000548161 LDHDQ86WU2 507 aa11.32□□□□□ -0.6
R3HDM2-212ENST00000548161 TAF1DQ9H5J8 278 aaPredicted RBP11.32□□□□□ -0.6
R3HDM2-212ENST00000548161 NIP7Q9Y221 180 aaKnown RBP eCLIP11.32□□□□□ -0.6
R3HDM2-212ENST00000548161 PASKQ96RG2 1323 aa11.32□□□□□ -0.6
R3HDM2-212ENST00000548161 CACNA1SQ13698 1873 aa11.32□□□□□ -0.6
R3HDM2-212ENST00000548161 SCN4AP35499 1836 aa11.31□□□□□ -0.6
R3HDM2-212ENST00000548161 FKBP4Q02790 459 aaKnown RBP eCLIP11.31□□□□□ -0.6
R3HDM2-212ENST00000548161 DCTN1Q14203 1278 aa11.31□□□□□ -0.6
R3HDM2-212ENST00000548161 RTKN2Q8IZC4 609 aa11.31□□□□□ -0.6
R3HDM2-212ENST00000548161 ZNF277Q9NRM2 450 aaPredicted RBP11.31□□□□□ -0.6
R3HDM2-212ENST00000548161 MKRN1Q9UHC7 482 aaKnown RBP11.31□□□□□ -0.6
R3HDM2-212ENST00000548161 ITGBL1O95965 494 aaPredicted RBP11.3□□□□□ -0.6
R3HDM2-212ENST00000548161 PPP2R1AP30153 589 aa11.3□□□□□ -0.6
R3HDM2-212ENST00000548161 ALDH1B1P30837 517 aa11.3□□□□□ -0.6
R3HDM2-212ENST00000548161 TAF7Q15545 349 aaPredicted RBP11.3□□□□□ -0.6
R3HDM2-212ENST00000548161 HLFQ16534 295 aa11.3□□□□□ -0.6
R3HDM2-212ENST00000548161 OLFM4Q6UX06 510 aa11.3□□□□□ -0.6
R3HDM2-212ENST00000548161 CNTNAP1P78357 1384 aa11.29□□□□□ -0.6
R3HDM2-212ENST00000548161 ZNF541Q9H0D2 1346 aa11.29□□□□□ -0.6
R3HDM2-212ENST00000548161 TMEM88BA6NKF7 163 aa11.28□□□□□ -0.6
R3HDM2-212ENST00000548161 FAM177BA6PVY3 158 aa11.28□□□□□ -0.6
R3HDM2-212ENST00000548161 FZD9O00144 591 aa11.28□□□□□ -0.6
R3HDM2-212ENST00000548161 CRY2Q49AN0 593 aa11.28□□□□□ -0.6
R3HDM2-212ENST00000548161 SYNE4Q8N205 404 aa11.28□□□□□ -0.6
R3HDM2-212ENST00000548161 MIS18AQ9NYP9 233 aa11.28□□□□□ -0.6
R3HDM2-212ENST00000548161 HACL1Q9UJ83 578 aa11.28□□□□□ -0.6
R3HDM2-212ENST00000548161 GTF3C3Q9Y5Q9 886 aa11.28□□□□□ -0.6
R3HDM2-212ENST00000548161 ERVV-1B6SEH8 477 aa11.27□□□□□ -0.61
R3HDM2-212ENST00000548161 FOXN1O15353 648 aa11.27□□□□□ -0.61
R3HDM2-212ENST00000548161 GTF2E1P29083 439 aaPredicted RBP11.27□□□□□ -0.61
R3HDM2-212ENST00000548161 EPHX2P34913 555 aa11.27□□□□□ -0.61
R3HDM2-212ENST00000548161 IARSP41252 1262 aaKnown RBP11.27□□□□□ -0.61
R3HDM2-212ENST00000548161 VEGFBP49765 207 aa11.27□□□□□ -0.61
R3HDM2-212ENST00000548161 EAPPQ56P03 285 aaPredicted RBP11.27□□□□□ -0.61
R3HDM2-212ENST00000548161 PNMA8AQ86V59 439 aaPredicted RBP11.27□□□□□ -0.61
R3HDM2-212ENST00000548161 PSMD1Q99460 953 aa11.27□□□□□ -0.61
R3HDM2-212ENST00000548161 GPC2Q8N158 579 aa11.26□□□□□ -0.61
R3HDM2-212ENST00000548161 NYXQ9GZU5 481 aa11.26□□□□□ -0.61
R3HDM2-212ENST00000548161 PRDM10Q9NQV6 1147 aa11.26□□□□□ -0.61
R3HDM2-212ENST00000548161 CLEC11AQ9Y240 323 aa11.26□□□□□ -0.61
R3HDM2-212ENST00000548161 SNED1Q8TER0 1413 aa11.26□□□□□ -0.61
R3HDM2-212ENST00000548161 HOXA10P31260 410 aaPredicted RBP11.25□□□□□ -0.61
R3HDM2-212ENST00000548161 CTCFP49711 727 aaPredicted RBP11.25□□□□□ -0.61
R3HDM2-212ENST00000548161 CC2D2BQ6DHV5 1058 aa11.25□□□□□ -0.61
R3HDM2-212ENST00000548161 NUTM1Q86Y26 1132 aa11.25□□□□□ -0.61
R3HDM2-212ENST00000548161 CNTROBQ8N137 903 aa11.25□□□□□ -0.61
R3HDM2-212ENST00000548161 NGEFQ8N5V2 710 aa11.25□□□□□ -0.61
R3HDM2-212ENST00000548161 PNISRQ8TF01 805 aaKnown RBP11.25□□□□□ -0.61
R3HDM2-212ENST00000548161 JDP2Q8WYK2 163 aa11.25□□□□□ -0.61
R3HDM2-212ENST00000548161 RNF123Q5XPI4 1314 aa11.25□□□□□ -0.61
R3HDM2-212ENST00000548161 MAP3K15Q6ZN16 1313 aa11.25□□□□□ -0.61
R3HDM2-212ENST00000548161 ADAMTSL1Q8N6G6 1762 aa11.24□□□□□ -0.61
R3HDM2-212ENST00000548161 EIF4A1P60842 406 aaKnown RBP11.24□□□□□ -0.61
R3HDM2-212ENST00000548161 GRIPAP1Q4V328 841 aa11.24□□□□□ -0.61
R3HDM2-212ENST00000548161 MAP1SQ66K74 1059 aaPredicted RBP11.24□□□□□ -0.61
R3HDM2-212ENST00000548161 DIEXFQ68CQ4 756 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms