RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 MSL1Q68DK7 614 aa14.64□□□□□ -0.07
CALCOCO1-208ENST00000547988 KIF6Q6ZMV9 814 aa14.64□□□□□ -0.07
CALCOCO1-208ENST00000547988 ARXQ96QS3 562 aa14.64□□□□□ -0.07
CALCOCO1-208ENST00000547988 STK31Q9BXU1 1019 aa14.64□□□□□ -0.07
CALCOCO1-208ENST00000547988 ZNF652Q9Y2D9 606 aa14.64□□□□□ -0.07
CALCOCO1-208ENST00000547988 ERVV-1B6SEH8 477 aa14.63□□□□□ -0.07
CALCOCO1-208ENST00000547988 ANXA1P04083 346 aa14.63□□□□□ -0.07
CALCOCO1-208ENST00000547988 FKBP8Q14318 412 aa14.63□□□□□ -0.07
CALCOCO1-208ENST00000547988 CLEC4GQ6UXB4 293 aa14.63□□□□□ -0.07
CALCOCO1-208ENST00000547988 BCL2L12Q9HB09 334 aa14.63□□□□□ -0.07
CALCOCO1-208ENST00000547988 MAP3K15Q6ZN16 1313 aa14.63□□□□□ -0.07
CALCOCO1-208ENST00000547988 N4BP2Q86UW6 1770 aaPredicted RBP14.62□□□□□ -0.07
CALCOCO1-208ENST00000547988 CT47B1P0C2W7 299 aaPredicted RBP14.62□□□□□ -0.07
CALCOCO1-208ENST00000547988 ZNF428Q96B54 188 aa14.62□□□□□ -0.07
CALCOCO1-208ENST00000547988 ANKRD31Q8N7Z5 1873 aa14.61□□□□□ -0.07
CALCOCO1-208ENST00000547988 ATP10DQ9P241 1426 aa14.61□□□□□ -0.07
CALCOCO1-208ENST00000547988 DLEC1Q9Y238 1755 aa14.61□□□□□ -0.07
CALCOCO1-208ENST00000547988 TTLL7Q6ZT98 887 aa14.61□□□□□ -0.07
CALCOCO1-208ENST00000547988 COPS6Q7L5N1 327 aa14.61□□□□□ -0.07
CALCOCO1-208ENST00000547988 XAGE3Q8WTP9 111 aa14.61□□□□□ -0.07
CALCOCO1-208ENST00000547988 BRCA1P38398 1863 aaKnown RBP14.61□□□□□ -0.07
CALCOCO1-208ENST00000547988 KIAA1551Q9HCM1 1747 aa14.61□□□□□ -0.07
CALCOCO1-208ENST00000547988 MMP10P09238 476 aa14.6□□□□□ -0.07
CALCOCO1-208ENST00000547988 TM4SF1P30408 202 aa14.6□□□□□ -0.07
CALCOCO1-208ENST00000547988 LAMB2P55268 1798 aa14.6□□□□□ -0.07
CALCOCO1-208ENST00000547988 CARMIL3Q8ND23 1372 aa14.6□□□□□ -0.07
CALCOCO1-208ENST00000547988 AIMP1Q12904 312 aaKnown RBP14.59□□□□□ -0.07
CALCOCO1-208ENST00000547988 NFIXQ14938 502 aa14.59□□□□□ -0.07
CALCOCO1-208ENST00000547988 ZBTB3Q9H5J0 574 aa14.59□□□□□ -0.07
CALCOCO1-208ENST00000547988 PPP1R1BQ9UD71 204 aaPredicted RBP14.59□□□□□ -0.07
CALCOCO1-208ENST00000547988 PARP3Q9Y6F1 533 aa14.59□□□□□ -0.07
CALCOCO1-208ENST00000547988 MYH3P11055 1940 aa14.58□□□□□ -0.07
CALCOCO1-208ENST00000547988 DDX58O95786 925 aaKnown RBP14.58□□□□□ -0.08
CALCOCO1-208ENST00000547988 SLC4A2P04920 1241 aa14.58□□□□□ -0.08
CALCOCO1-208ENST00000547988 HLFQ16534 295 aa14.58□□□□□ -0.08
CALCOCO1-208ENST00000547988 TBC1D9BQ66K14 1250 aa14.58□□□□□ -0.08
CALCOCO1-208ENST00000547988 GIGYF2Q6Y7W6 1299 aaKnown RBP14.58□□□□□ -0.08
CALCOCO1-208ENST00000547988 ANKRD13DQ6ZTN6 518 aa14.58□□□□□ -0.08
CALCOCO1-208ENST00000547988 PLBD2Q8NHP8 589 aa14.58□□□□□ -0.08
CALCOCO1-208ENST00000547988 PHAXQ9H814 394 aaKnown RBP14.58□□□□□ -0.08
CALCOCO1-208ENST00000547988 CACNA1SQ13698 1873 aa14.57□□□□□ -0.08
CALCOCO1-208ENST00000547988 POLRMTO00411 1230 aaKnown RBP14.57□□□□□ -0.08
CALCOCO1-208ENST00000547988 TCERG1O14776 1098 aaKnown RBP14.57□□□□□ -0.08
CALCOCO1-208ENST00000547988 DDR1Q08345 913 aa14.57□□□□□ -0.08
CALCOCO1-208ENST00000547988 ALDH1L2Q3SY69 923 aa14.57□□□□□ -0.08
CALCOCO1-208ENST00000547988 HSP90AB3PQ58FF7 597 aa14.57□□□□□ -0.08
CALCOCO1-208ENST00000547988 SETDB2Q96T68 719 aa14.57□□□□□ -0.08
CALCOCO1-208ENST00000547988 SRCAPQ6ZRS2 3230 aa14.56□□□□□ -0.08
CALCOCO1-208ENST00000547988 DDX60Q8IY21 1712 aaKnown RBP14.56□□□□□ -0.08
CALCOCO1-208ENST00000547988 FLIIQ13045 1269 aa14.56□□□□□ -0.08
CALCOCO1-208ENST00000547988 NIP7Q9Y221 180 aaKnown RBP eCLIP14.56□□□□□ -0.08
CALCOCO1-208ENST00000547988 C10orf71Q711Q0 1435 aa14.56□□□□□ -0.08
CALCOCO1-208ENST00000547988 COL11A2P13942 1736 aaPredicted RBP14.55□□□□□ -0.08
CALCOCO1-208ENST00000547988 BICDL1Q6ZP65 573 aa14.55□□□□□ -0.08
CALCOCO1-208ENST00000547988 G2E3Q7L622 706 aa14.55□□□□□ -0.08
CALCOCO1-208ENST00000547988 RIC3Q7Z5B4 369 aa14.55□□□□□ -0.08
CALCOCO1-208ENST00000547988 IBTKQ9P2D0 1353 aaPredicted RBP14.55□□□□□ -0.08
CALCOCO1-208ENST00000547988 SERPINB2P05120 415 aa14.54□□□□□ -0.08
CALCOCO1-208ENST00000547988 TCIRG1Q13488 830 aa14.54□□□□□ -0.08
CALCOCO1-208ENST00000547988 ZNF34Q8IZ26 560 aa14.54□□□□□ -0.08
CALCOCO1-208ENST00000547988 SSH1Q8WYL5 1049 aa14.54□□□□□ -0.08
CALCOCO1-208ENST00000547988 ADCY9O60503 1353 aa14.54□□□□□ -0.08
CALCOCO1-208ENST00000547988 ARFGEF1Q9Y6D6 1849 aa14.53□□□□□ -0.08
CALCOCO1-208ENST00000547988 TNRC6CQ9HCJ0 1690 aaKnown RBP14.53□□□□□ -0.08
CALCOCO1-208ENST00000547988 FKBP5Q13451 457 aaPredicted RBP14.53□□□□□ -0.08
CALCOCO1-208ENST00000547988 PARP10Q53GL7 1025 aa14.53□□□□□ -0.08
CALCOCO1-208ENST00000547988 KSR2Q6VAB6 950 aa14.53□□□□□ -0.08
CALCOCO1-208ENST00000547988 MRPL50Q8N5N7 158 aaKnown RBP14.53□□□□□ -0.08
CALCOCO1-208ENST00000547988 YTHDC1Q96MU7 727 aaKnown RBP14.53□□□□□ -0.08
CALCOCO1-208ENST00000547988 SMC4Q9NTJ3 1288 aa14.53□□□□□ -0.08
CALCOCO1-208ENST00000547988 CD2APQ9Y5K6 639 aa14.53□□□□□ -0.08
CALCOCO1-208ENST00000547988 PTPRCP08575 1304 aa14.52□□□□□ -0.08
CALCOCO1-208ENST00000547988 UBN2Q6ZU65 1347 aa14.52□□□□□ -0.08
CALCOCO1-208ENST00000547988 PI4KAP2A4QPH2 592 aa14.52□□□□□ -0.09
CALCOCO1-208ENST00000547988 GPTP24298 496 aa14.52□□□□□ -0.09
CALCOCO1-208ENST00000547988 BRPF1P55201 1214 aaPredicted RBP14.52□□□□□ -0.09
CALCOCO1-208ENST00000547988 NBPF5PQ86XG9 351 aaPredicted RBP14.52□□□□□ -0.09
CALCOCO1-208ENST00000547988 PI4KAP1Q8N8J0 262 aa14.52□□□□□ -0.09
CALCOCO1-208ENST00000547988 CNBD1Q8NA66 436 aa14.52□□□□□ -0.09
CALCOCO1-208ENST00000547988 FHDC1Q9C0D6 1143 aaPredicted RBP14.52□□□□□ -0.09
CALCOCO1-208ENST00000547988 NYXQ9GZU5 481 aa14.52□□□□□ -0.09
CALCOCO1-208ENST00000547988 MAP3K2Q9Y2U5 619 aa14.52□□□□□ -0.09
CALCOCO1-208ENST00000547988 PXDNLA1KZ92 1463 aa14.51□□□□□ -0.09
CALCOCO1-208ENST00000547988 RNF123Q5XPI4 1314 aa14.51□□□□□ -0.09
CALCOCO1-208ENST00000547988 RARSP54136 660 aaKnown RBP14.51□□□□□ -0.09
CALCOCO1-208ENST00000547988 TPTE2Q6XPS3 522 aa14.51□□□□□ -0.09
CALCOCO1-208ENST00000547988 PPP1R42Q7Z4L9 355 aa14.51□□□□□ -0.09
CALCOCO1-208ENST00000547988 ISCA1Q9BUE6 129 aa14.51□□□□□ -0.09
CALCOCO1-208ENST00000547988 METTL22Q9BUU2 404 aaPredicted RBP14.51□□□□□ -0.09
CALCOCO1-208ENST00000547988 RIC1Q4ADV7 1423 aa14.5□□□□□ -0.09
CALCOCO1-208ENST00000547988 NPHP1O15259 732 aa14.5□□□□□ -0.09
CALCOCO1-208ENST00000547988 ST5P78524 1137 aa14.5□□□□□ -0.09
CALCOCO1-208ENST00000547988 NEXNQ0ZGT2 675 aa14.5□□□□□ -0.09
CALCOCO1-208ENST00000547988 TRIM28Q13263 835 aaKnown RBP14.5□□□□□ -0.09
CALCOCO1-208ENST00000547988 PRR5LQ6MZQ0 368 aa14.5□□□□□ -0.09
CALCOCO1-208ENST00000547988 NLRP10Q86W26 655 aa14.5□□□□□ -0.09
CALCOCO1-208ENST00000547988 KLHL34Q8N239 644 aa14.5□□□□□ -0.09
CALCOCO1-208ENST00000547988 SYT17Q9BSW7 474 aa14.5□□□□□ -0.09
CALCOCO1-208ENST00000547988 BCL2L13Q9BXK5 485 aa14.5□□□□□ -0.09
CALCOCO1-208ENST00000547988 KIF16BQ96L93 1317 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms