RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 KCNQ3O43525 872 aa8.94□□□□□ -0.98
SCAF11-211ENST00000547950 FCHSD2O94868 740 aa8.94□□□□□ -0.98
SCAF11-211ENST00000547950 TM4SF1P30408 202 aa8.94□□□□□ -0.98
SCAF11-211ENST00000547950 MCM10Q7L590 875 aa8.94□□□□□ -0.98
SCAF11-211ENST00000547950 RTF1Q92541 710 aaKnown RBP8.94□□□□□ -0.98
SCAF11-211ENST00000547950 NARFQ9UHQ1 456 aa8.94□□□□□ -0.98
SCAF11-211ENST00000547950 SENP3-EIF4A1A0A087X0R7 540 aa8.93□□□□□ -0.98
SCAF11-211ENST00000547950 POLRMTO00411 1230 aaKnown RBP8.93□□□□□ -0.98
SCAF11-211ENST00000547950 KCNA3P22001 575 aa8.93□□□□□ -0.98
SCAF11-211ENST00000547950 CHRNA5P30532 468 aa8.93□□□□□ -0.98
SCAF11-211ENST00000547950 DCTN1Q14203 1278 aa8.93□□□□□ -0.98
SCAF11-211ENST00000547950 NFIXQ14938 502 aa8.93□□□□□ -0.98
SCAF11-211ENST00000547950 BICDL1Q6ZP65 573 aa8.93□□□□□ -0.98
SCAF11-211ENST00000547950 NPM2Q86SE8 214 aaKnown RBP8.93□□□□□ -0.98
SCAF11-211ENST00000547950 FMNL2Q96PY5 1086 aa8.93□□□□□ -0.98
SCAF11-211ENST00000547950 TEX13AQ9BXU3 409 aaPredicted RBP8.93□□□□□ -0.98
SCAF11-211ENST00000547950 GPBP1L1Q9HC44 474 aaPredicted RBP8.93□□□□□ -0.98
SCAF11-211ENST00000547950 PIM2Q9P1W9 311 aa8.93□□□□□ -0.98
SCAF11-211ENST00000547950 COL3A1P02461 1466 aaPredicted RBP8.93□□□□□ -0.98
SCAF11-211ENST00000547950 COL24A1Q17RW2 1714 aa8.93□□□□□ -0.98
SCAF11-211ENST00000547950 TAF1LQ8IZX4 1826 aa8.92□□□□□ -0.98
SCAF11-211ENST00000547950 A1BGP04217 495 aa8.92□□□□□ -0.98
SCAF11-211ENST00000547950 EIF5P55010 431 aaKnown RBP8.92□□□□□ -0.98
SCAF11-211ENST00000547950 PDAP1Q13442 181 aaKnown RBP8.92□□□□□ -0.98
SCAF11-211ENST00000547950 LCE2DQ5TA82 110 aaPredicted RBP8.92□□□□□ -0.98
SCAF11-211ENST00000547950 BCL2L12Q9HB09 334 aa8.92□□□□□ -0.98
SCAF11-211ENST00000547950 TBC1D2BQ9UPU7 963 aa8.92□□□□□ -0.98
SCAF11-211ENST00000547950 UBR3Q6ZT12 1888 aa8.91□□□□□ -0.98
SCAF11-211ENST00000547950 PXDNLA1KZ92 1463 aa8.91□□□□□ -0.98
SCAF11-211ENST00000547950 ATP10DQ9P241 1426 aa8.91□□□□□ -0.98
SCAF11-211ENST00000547950 COL15A1P39059 1388 aa8.91□□□□□ -0.98
SCAF11-211ENST00000547950 HEG1Q9ULI3 1381 aa8.91□□□□□ -0.98
SCAF11-211ENST00000547950 A0A087WZG4 1122 aa8.91□□□□□ -0.98
SCAF11-211ENST00000547950 SERPINB2P05120 415 aa8.91□□□□□ -0.98
SCAF11-211ENST00000547950 NEFMP07197 916 aa8.91□□□□□ -0.98
SCAF11-211ENST00000547950 DALRD3Q5D0E6 543 aaKnown RBP8.91□□□□□ -0.98
SCAF11-211ENST00000547950 MIS18AQ9NYP9 233 aa8.91□□□□□ -0.98
SCAF11-211ENST00000547950 USP16Q9Y5T5 823 aa8.91□□□□□ -0.98
SCAF11-211ENST00000547950 CICQ96RK0 1608 aaPredicted RBP8.91□□□□□ -0.98
SCAF11-211ENST00000547950 C10orf71Q711Q0 1435 aa8.9□□□□□ -0.98
SCAF11-211ENST00000547950 PRAMEF22A3QJZ6 481 aa8.9□□□□□ -0.98
SCAF11-211ENST00000547950 PIP4K2AP48426 406 aaPredicted RBP8.9□□□□□ -0.98
SCAF11-211ENST00000547950 DDX10Q13206 875 aaKnown RBP8.9□□□□□ -0.98
SCAF11-211ENST00000547950 MRC1P22897 1456 aa8.89□□□□□ -0.99
SCAF11-211ENST00000547950 CEMIPQ8WUJ3 1361 aa8.89□□□□□ -0.99
SCAF11-211ENST00000547950 HTATSF1O43719 755 aaKnown RBP8.89□□□□□ -0.99
SCAF11-211ENST00000547950 SNRPA1P09661 255 aaKnown RBP8.89□□□□□ -0.99
SCAF11-211ENST00000547950 IL6STP40189 918 aaPredicted RBP8.89□□□□□ -0.99
SCAF11-211ENST00000547950 TAF7Q15545 349 aaPredicted RBP8.89□□□□□ -0.99
SCAF11-211ENST00000547950 TBC1D9BQ66K14 1250 aa8.89□□□□□ -0.99
SCAF11-211ENST00000547950 C2CD5Q86YS7 1000 aa8.89□□□□□ -0.99
SCAF11-211ENST00000547950 CCDC24Q8N4L8 307 aa8.89□□□□□ -0.99
SCAF11-211ENST00000547950 KCPQ6ZWJ8 1503 aa8.89□□□□□ -0.99
SCAF11-211ENST00000547950 GOLGB1Q14789 3259 aaKnown RBP8.88□□□□□ -0.99
SCAF11-211ENST00000547950 H0YIN7 160 aa8.88□□□□□ -0.99
SCAF11-211ENST00000547950 NPHP1O15259 732 aa8.88□□□□□ -0.99
SCAF11-211ENST00000547950 C9orf131Q5VYM1 1079 aa8.88□□□□□ -0.99
SCAF11-211ENST00000547950 SETDB2Q96T68 719 aa8.88□□□□□ -0.99
SCAF11-211ENST00000547950 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.88□□□□□ -0.99
SCAF11-211ENST00000547950 ZNF831Q5JPB2 1677 aa8.88□□□□□ -0.99
SCAF11-211ENST00000547950 DZIP3Q86Y13 1208 aaKnown RBP8.87□□□□□ -0.99
SCAF11-211ENST00000547950 PDCD7Q8N8D1 485 aaKnown RBP8.87□□□□□ -0.99
SCAF11-211ENST00000547950 ZNF622Q969S3 477 aaKnown RBP eCLIP8.87□□□□□ -0.99
SCAF11-211ENST00000547950 PLEKHF1Q96S99 279 aa8.87□□□□□ -0.99
SCAF11-211ENST00000547950 THUMPD2Q9BTF0 503 aaKnown RBP8.87□□□□□ -0.99
SCAF11-211ENST00000547950 PNNQ9H307 717 aaKnown RBP8.87□□□□□ -0.99
SCAF11-211ENST00000547950 ADCY9O60503 1353 aa8.86□□□□□ -0.99
SCAF11-211ENST00000547950 MAPK8IP3Q9UPT6 1336 aa8.86□□□□□ -0.99
SCAF11-211ENST00000547950 CAMTA2O94983 1202 aa8.86□□□□□ -0.99
SCAF11-211ENST00000547950 RALBP1Q15311 655 aa8.86□□□□□ -0.99
SCAF11-211ENST00000547950 NFE2L2Q16236 605 aa8.86□□□□□ -0.99
SCAF11-211ENST00000547950 NGEFQ8N5V2 710 aa8.86□□□□□ -0.99
SCAF11-211ENST00000547950 TTLL6Q8N841 843 aa8.86□□□□□ -0.99
SCAF11-211ENST00000547950 BRIP1Q9BX63 1249 aa8.86□□□□□ -0.99
SCAF11-211ENST00000547950 RNF181Q9P0P0 153 aa8.86□□□□□ -0.99
SCAF11-211ENST00000547950 MYH14Q7Z406 1995 aaKnown RBP8.86□□□□□ -0.99
SCAF11-211ENST00000547950 SCN11AQ9UI33 1791 aa8.86□□□□□ -0.99
SCAF11-211ENST00000547950 C4AP0C0L4 1744 aa8.85□□□□□ -0.99
SCAF11-211ENST00000547950 COL5A3P25940 1745 aaPredicted RBP8.85□□□□□ -0.99
SCAF11-211ENST00000547950 TJP1Q07157 1748 aa8.85□□□□□ -0.99
SCAF11-211ENST00000547950 NBPF26B4DH59 902 aa8.85□□□□□ -0.99
SCAF11-211ENST00000547950 KIF3CO14782 793 aa8.85□□□□□ -0.99
SCAF11-211ENST00000547950 PDE6BP35913 854 aa8.85□□□□□ -0.99
SCAF11-211ENST00000547950 PRR5LQ6MZQ0 368 aa8.85□□□□□ -0.99
SCAF11-211ENST00000547950 NBPF10Q6P3W6 841 aaKnown RBP8.85□□□□□ -0.99
SCAF11-211ENST00000547950 NBPF15Q8N660 670 aa8.85□□□□□ -0.99
SCAF11-211ENST00000547950 CNBD1Q8NA66 436 aa8.85□□□□□ -0.99
SCAF11-211ENST00000547950 PNISRQ8TF01 805 aaKnown RBP8.85□□□□□ -0.99
SCAF11-211ENST00000547950 NMRK2Q9NPI5 230 aa8.85□□□□□ -0.99
SCAF11-211ENST00000547950 RRP7AQ9Y3A4 280 aaKnown RBP8.85□□□□□ -0.99
SCAF11-211ENST00000547950 FAM177BA6PVY3 158 aa8.84□□□□□ -0.99
SCAF11-211ENST00000547950 RIPK4P57078 832 aa8.84□□□□□ -0.99
SCAF11-211ENST00000547950 RASSF7Q02833 373 aa8.84□□□□□ -0.99
SCAF11-211ENST00000547950 NBPF5PQ86XG9 351 aaPredicted RBP8.84□□□□□ -0.99
SCAF11-211ENST00000547950 L3MBTL3Q96JM7 780 aaPredicted RBP8.84□□□□□ -0.99
SCAF11-211ENST00000547950 ZNF652Q9Y2D9 606 aa8.84□□□□□ -0.99
SCAF11-211ENST00000547950 CARMIL3Q8ND23 1372 aa8.84□□□□□ -0.99
SCAF11-211ENST00000547950 CHD4Q14839 1912 aa8.84□□□□□ -1
SCAF11-211ENST00000547950 C21orf2O43822 256 aa8.83□□□□□ -1
SCAF11-211ENST00000547950 EIF4A1P60842 406 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 173.8 ms