RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 SNRPA1P09661 255 aaKnown RBP27.09■■□□□ 1.93
SSH1-207ENST00000547862 ZC3H4Q9UPT8 1303 aaKnown RBP27.09■■□□□ 1.93
SSH1-207ENST00000547862 MIS18AQ9NYP9 233 aa27.07■■□□□ 1.92
SSH1-207ENST00000547862 NEFMP07197 916 aa27.06■■□□□ 1.92
SSH1-207ENST00000547862 NBPF5PQ86XG9 351 aaPredicted RBP27.06■■□□□ 1.92
SSH1-207ENST00000547862 PDZRN3Q9UPQ7 1066 aa27.06■■□□□ 1.92
SSH1-207ENST00000547862 FSTL1Q12841 308 aa27.05■■□□□ 1.92
SSH1-207ENST00000547862 ZNF652Q9Y2D9 606 aa27.05■■□□□ 1.92
SSH1-207ENST00000547862 GLTPD2A6NH11 291 aa27.04■■□□□ 1.92
SSH1-207ENST00000547862 FAM177BA6PVY3 158 aa27.04■■□□□ 1.92
SSH1-207ENST00000547862 NBPF26B4DH59 902 aa27.03■■□□□ 1.92
SSH1-207ENST00000547862 PRPF40BQ6NWY9 871 aaKnown RBP27.03■■□□□ 1.92
SSH1-207ENST00000547862 NBPF10Q6P3W6 841 aaKnown RBP27.03■■□□□ 1.92
SSH1-207ENST00000547862 NBPF15Q8N660 670 aa27.03■■□□□ 1.92
SSH1-207ENST00000547862 HTATSF1O43719 755 aaKnown RBP27.02■■□□□ 1.92
SSH1-207ENST00000547862 IFFO2Q5TF58 517 aa27.02■■□□□ 1.92
SSH1-207ENST00000547862 SMC1BQ8NDV3 1235 aa27.02■■□□□ 1.92
SSH1-207ENST00000547862 TAF7Q15545 349 aaPredicted RBP27.01■■□□□ 1.91
SSH1-207ENST00000547862 ERFEQ4G0M1 354 aa27.01■■□□□ 1.91
SSH1-207ENST00000547862 DNAJC5GQ8N7S2 189 aa27.01■■□□□ 1.91
SSH1-207ENST00000547862 CNKSR1Q969H4 720 aa27.01■■□□□ 1.91
SSH1-207ENST00000547862 TAOK3Q9H2K8 898 aa27.01■■□□□ 1.91
SSH1-207ENST00000547862 NIP7Q9Y221 180 aaKnown RBP eCLIP27.01■■□□□ 1.91
SSH1-207ENST00000547862 NUP98P52948 1817 aa27.01■■□□□ 1.91
SSH1-207ENST00000547862 SRGNP10124 158 aa27■■□□□ 1.91
SSH1-207ENST00000547862 STYK1Q6J9G0 422 aa27■■□□□ 1.91
SSH1-207ENST00000547862 NGEFQ8N5V2 710 aa27■■□□□ 1.91
SSH1-207ENST00000547862 THUMPD2Q9BTF0 503 aaKnown RBP27■■□□□ 1.91
SSH1-207ENST00000547862 VEGFAP15692 232 aaPredicted RBP26.99■■□□□ 1.91
SSH1-207ENST00000547862 MASTLQ96GX5 879 aa26.99■■□□□ 1.91
SSH1-207ENST00000547862 CLEC4GQ6UXB4 293 aa26.98■■□□□ 1.91
SSH1-207ENST00000547862 MAPK8IP3Q9UPT6 1336 aa26.97■■□□□ 1.91
SSH1-207ENST00000547862 HLFQ16534 295 aa26.96■■□□□ 1.91
SSH1-207ENST00000547862 NFE2L2Q16236 605 aa26.95■■□□□ 1.9
SSH1-207ENST00000547862 DPY19L2Q6NUT2 758 aa26.95■■□□□ 1.9
SSH1-207ENST00000547862 KLRG1Q96E93 195 aa26.95■■□□□ 1.9
SSH1-207ENST00000547862 LTBP3Q9NS15 1303 aa26.94■■□□□ 1.9
SSH1-207ENST00000547862 SOGA3Q5TF21 947 aa26.93■■□□□ 1.9
SSH1-207ENST00000547862 PLEKHF1Q96S99 279 aa26.93■■□□□ 1.9
SSH1-207ENST00000547862 RRP7AQ9Y3A4 280 aaKnown RBP26.93■■□□□ 1.9
SSH1-207ENST00000547862 MYL6BP14649 208 aa26.92■■□□□ 1.9
SSH1-207ENST00000547862 NPR1P16066 1061 aa26.92■■□□□ 1.9
SSH1-207ENST00000547862 GTF2E1P29083 439 aaPredicted RBP26.92■■□□□ 1.9
SSH1-207ENST00000547862 TPTE2Q6XPS3 522 aa26.92■■□□□ 1.9
SSH1-207ENST00000547862 PNISRQ8TF01 805 aaKnown RBP26.92■■□□□ 1.9
SSH1-207ENST00000547862 CCDC93Q567U6 631 aa26.91■■□□□ 1.9
SSH1-207ENST00000547862 ABCC12Q96J65 1359 aa26.91■■□□□ 1.9
SSH1-207ENST00000547862 POTECB2RU33 542 aa26.9■■□□□ 1.9
SSH1-207ENST00000547862 OLFM4Q6UX06 510 aa26.9■■□□□ 1.9
SSH1-207ENST00000547862 KIF6Q6ZMV9 814 aa26.9■■□□□ 1.9
SSH1-207ENST00000547862 DDNO94850 711 aaPredicted RBP26.89■■□□□ 1.9
SSH1-207ENST00000547862 EIF4A1P60842 406 aaKnown RBP26.89■■□□□ 1.9
SSH1-207ENST00000547862 TTLL7Q6ZT98 887 aa26.88■■□□□ 1.89
SSH1-207ENST00000547862 NUTM1Q86Y26 1132 aa26.88■■□□□ 1.89
SSH1-207ENST00000547862 ZBTB3Q9H5J0 574 aa26.88■■□□□ 1.89
SSH1-207ENST00000547862 GPTP24298 496 aa26.87■■□□□ 1.89
SSH1-207ENST00000547862 MAP3K15Q6ZN16 1313 aa26.87■■□□□ 1.89
SSH1-207ENST00000547862 ZNF277Q9NRM2 450 aaPredicted RBP26.86■■□□□ 1.89
SSH1-207ENST00000547862 RGL2O15211 777 aa26.85■■□□□ 1.89
SSH1-207ENST00000547862 PNNQ9H307 717 aaKnown RBP26.85■■□□□ 1.89
SSH1-207ENST00000547862 TSPYL4Q9UJ04 414 aa26.85■■□□□ 1.89
SSH1-207ENST00000547862 SCN4AP35499 1836 aa26.85■■□□□ 1.89
SSH1-207ENST00000547862 POTEIP0CG38 1075 aa26.84■■□□□ 1.89
SSH1-207ENST00000547862 POTEJP0CG39 1038 aa26.84■■□□□ 1.89
SSH1-207ENST00000547862 FKBP4Q02790 459 aaKnown RBP eCLIP26.84■■□□□ 1.89
SSH1-207ENST00000547862 C7orf43Q8WVR3 580 aa26.84■■□□□ 1.89
SSH1-207ENST00000547862 ANKRD36CQ5JPF3 1778 aa26.84■■□□□ 1.89
SSH1-207ENST00000547862 NYXQ9GZU5 481 aa26.83■■□□□ 1.89
SSH1-207ENST00000547862 UBN2Q6ZU65 1347 aa26.83■■□□□ 1.89
SSH1-207ENST00000547862 ZNF541Q9H0D2 1346 aa26.83■■□□□ 1.89
SSH1-207ENST00000547862 KLRG2A4D1S0 409 aaPredicted RBP26.82■■□□□ 1.88
SSH1-207ENST00000547862 JMYQ8N9B5 988 aa26.82■■□□□ 1.88
SSH1-207ENST00000547862 ERVV-1B6SEH8 477 aa26.81■■□□□ 1.88
SSH1-207ENST00000547862 EIF2S2P20042 333 aaKnown RBP26.8■■□□□ 1.88
SSH1-207ENST00000547862 RIPK4P57078 832 aa26.8■■□□□ 1.88
SSH1-207ENST00000547862 RPGRQ92834 1020 aaKnown RBP26.8■■□□□ 1.88
SSH1-207ENST00000547862 ALDH1B1P30837 517 aa26.79■■□□□ 1.88
SSH1-207ENST00000547862 CHADLQ6NUI6 762 aa26.79■■□□□ 1.88
SSH1-207ENST00000547862 RTKN2Q8IZC4 609 aa26.78■■□□□ 1.88
SSH1-207ENST00000547862 LAMB2P55268 1798 aa26.77■■□□□ 1.88
SSH1-207ENST00000547862 IBTKQ9P2D0 1353 aaPredicted RBP26.77■■□□□ 1.88
SSH1-207ENST00000547862 ANXA1P04083 346 aa26.77■■□□□ 1.88
SSH1-207ENST00000547862 IARSP41252 1262 aaKnown RBP26.77■■□□□ 1.88
SSH1-207ENST00000547862 SUSD4Q5VX71 490 aa26.77■■□□□ 1.88
SSH1-207ENST00000547862 CCDC146Q8IYE0 955 aa26.77■■□□□ 1.88
SSH1-207ENST00000547862 SYNE4Q8N205 404 aa26.77■■□□□ 1.88
SSH1-207ENST00000547862 NECTIN2Q92692 538 aa26.77■■□□□ 1.88
SSH1-207ENST00000547862 IQCA1LA6NCM1 817 aa26.76■■□□□ 1.87
SSH1-207ENST00000547862 RALBP1Q15311 655 aa26.76■■□□□ 1.87
SSH1-207ENST00000547862 EAPPQ56P03 285 aaPredicted RBP26.76■■□□□ 1.87
SSH1-207ENST00000547862 SLC51AQ86UW1 340 aa26.76■■□□□ 1.87
SSH1-207ENST00000547862 ERBB4Q15303 1308 aa26.75■■□□□ 1.87
SSH1-207ENST00000547862 TCERG1O14776 1098 aaKnown RBP26.75■■□□□ 1.87
SSH1-207ENST00000547862 NEUROD2Q15784 382 aa26.75■■□□□ 1.87
SSH1-207ENST00000547862 CRY2Q49AN0 593 aa26.75■■□□□ 1.87
SSH1-207ENST00000547862 RIC1Q4ADV7 1423 aa26.74■■□□□ 1.87
SSH1-207ENST00000547862 COL4A5P29400 1685 aa26.74■■□□□ 1.87
SSH1-207ENST00000547862 TMPOP42166 694 aaKnown RBP26.74■■□□□ 1.87
SSH1-207ENST00000547862 DDX10Q13206 875 aaKnown RBP26.74■■□□□ 1.87
SSH1-207ENST00000547862 PROSER3Q2NL68 480 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms