RNA–Protein interactions for RNA: ENST00000546882.5

RFX4-207, Transcript of regulatory factor X4, humanhuman

TSL 3

Gene RFX4, Length 660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-207ENST00000546882 KIF24Q5T7B8 1368 aa12.05□□□□□ -0.48
RFX4-207ENST00000546882 PPP1R37O75864 691 aa12.04□□□□□ -0.48
RFX4-207ENST00000546882 PHKG2P15735 406 aa12.04□□□□□ -0.48
RFX4-207ENST00000546882 LMNB1P20700 586 aa12.04□□□□□ -0.48
RFX4-207ENST00000546882 TESK2Q96S53 571 aa12.04□□□□□ -0.48
RFX4-207ENST00000546882 SRP68Q9UHB9 627 aaKnown RBP12.04□□□□□ -0.48
RFX4-207ENST00000546882 TONSLQ96HA7 1378 aa12.04□□□□□ -0.48
RFX4-207ENST00000546882 TIAM2Q8IVF5 1701 aa12.03□□□□□ -0.48
RFX4-207ENST00000546882 FAM161AQ3B820 660 aa12.03□□□□□ -0.48
RFX4-207ENST00000546882 POLRMTO00411 1230 aaKnown RBP12.02□□□□□ -0.49
RFX4-207ENST00000546882 TM4SF1P30408 202 aa12.02□□□□□ -0.49
RFX4-207ENST00000546882 IFNL2Q8IZJ0 200 aa12.02□□□□□ -0.49
RFX4-207ENST00000546882 ADAMTS7Q9UKP4 1686 aa12.02□□□□□ -0.49
RFX4-207ENST00000546882 USP42Q9H9J4 1324 aaKnown RBP12.02□□□□□ -0.49
RFX4-207ENST00000546882 CNTNAP1P78357 1384 aa12.02□□□□□ -0.49
RFX4-207ENST00000546882 EMILIN1Q9Y6C2 1016 aa12.01□□□□□ -0.49
RFX4-207ENST00000546882 DLEC1Q9Y238 1755 aa12□□□□□ -0.49
RFX4-207ENST00000546882 AFDNP55196 1824 aaKnown RBP12□□□□□ -0.49
RFX4-207ENST00000546882 VIRMAQ69YN4 1812 aaKnown RBP12□□□□□ -0.49
RFX4-207ENST00000546882 NFKBIEO00221 500 aa12□□□□□ -0.49
RFX4-207ENST00000546882 CTCFP49711 727 aaPredicted RBP12□□□□□ -0.49
RFX4-207ENST00000546882 NEUROD1Q13562 356 aa12□□□□□ -0.49
RFX4-207ENST00000546882 ABHD8Q96I13 439 aa12□□□□□ -0.49
RFX4-207ENST00000546882 EYA1Q99502 592 aa12□□□□□ -0.49
RFX4-207ENST00000546882 TMEM92Q6UXU6 159 aa11.99□□□□□ -0.49
RFX4-207ENST00000546882 WBP1LQ9NX94 342 aa11.99□□□□□ -0.49
RFX4-207ENST00000546882 KIF20BQ96Q89 1820 aa11.99□□□□□ -0.49
RFX4-207ENST00000546882 DICER1Q9UPY3 1922 aaKnown RBP11.99□□□□□ -0.49
RFX4-207ENST00000546882 PDE4DIPQ5VU43 2346 aa11.99□□□□□ -0.49
RFX4-207ENST00000546882 TNRC18O15417 2968 aaPredicted RBP11.98□□□□□ -0.49
RFX4-207ENST00000546882 NRXN2Q9P2S2 1712 aa11.98□□□□□ -0.49
RFX4-207ENST00000546882 ANKRD26Q9UPS8 1709 aa11.98□□□□□ -0.49
RFX4-207ENST00000546882 PASKQ96RG2 1323 aa11.98□□□□□ -0.49
RFX4-207ENST00000546882 ERVV-2B6SEH9 535 aa11.98□□□□□ -0.49
RFX4-207ENST00000546882 CRKLP46109 303 aaKnown RBP11.98□□□□□ -0.49
RFX4-207ENST00000546882 LBX1P52954 281 aa11.98□□□□□ -0.49
RFX4-207ENST00000546882 WASHC2AQ641Q2 1341 aa11.97□□□□□ -0.49
RFX4-207ENST00000546882 ST20-MTHFSA0A0A6YYL1 179 aa11.97□□□□□ -0.49
RFX4-207ENST00000546882 VEGFBP49765 207 aa11.97□□□□□ -0.49
RFX4-207ENST00000546882 RGS19P49795 217 aa11.97□□□□□ -0.49
RFX4-207ENST00000546882 TTLL6Q8N841 843 aa11.96□□□□□ -0.49
RFX4-207ENST00000546882 TJP1Q07157 1748 aa11.96□□□□□ -0.49
RFX4-207ENST00000546882 FER1L6Q2WGJ9 1857 aa11.95□□□□□ -0.5
RFX4-207ENST00000546882 HSPA8P11142 646 aaKnown RBP11.95□□□□□ -0.5
RFX4-207ENST00000546882 MLLT1Q03111 559 aaPredicted RBP11.95□□□□□ -0.5
RFX4-207ENST00000546882 USPL1Q5W0Q7 1092 aa11.95□□□□□ -0.5
RFX4-207ENST00000546882 INTS5Q6P9B9 1019 aaKnown RBP11.95□□□□□ -0.5
RFX4-207ENST00000546882 AIDAQ96BJ3 306 aa11.95□□□□□ -0.5
RFX4-207ENST00000546882 GTPBP6O43824 516 aaPredicted RBP11.94□□□□□ -0.5
RFX4-207ENST00000546882 PTCD1O75127 700 aaKnown RBP11.94□□□□□ -0.5
RFX4-207ENST00000546882 NFIXQ14938 502 aa11.94□□□□□ -0.5
RFX4-207ENST00000546882 LCE2DQ5TA82 110 aaPredicted RBP11.94□□□□□ -0.5
RFX4-207ENST00000546882 FAM163AQ96GL9 167 aaPredicted RBP11.94□□□□□ -0.5
RFX4-207ENST00000546882 RYDENQ9NUL5 291 aaKnown RBP11.94□□□□□ -0.5
RFX4-207ENST00000546882 PPM1GO15355 546 aaPredicted RBP11.93□□□□□ -0.5
RFX4-207ENST00000546882 ITGBL1O95965 494 aaPredicted RBP11.93□□□□□ -0.5
RFX4-207ENST00000546882 CARD14Q9BXL6 1004 aa11.93□□□□□ -0.5
RFX4-207ENST00000546882 CARMIL3Q8ND23 1372 aa11.92□□□□□ -0.5
RFX4-207ENST00000546882 DDNO94850 711 aaPredicted RBP11.92□□□□□ -0.5
RFX4-207ENST00000546882 ERFEQ4G0M1 354 aa11.92□□□□□ -0.5
RFX4-207ENST00000546882 C2CD5Q86YS7 1000 aa11.92□□□□□ -0.5
RFX4-207ENST00000546882 BCL2L12Q9HB09 334 aa11.92□□□□□ -0.5
RFX4-207ENST00000546882 TMEM88BA6NKF7 163 aa11.91□□□□□ -0.5
RFX4-207ENST00000546882 SLC24A1O60721 1099 aa11.91□□□□□ -0.5
RFX4-207ENST00000546882 ZPR1O75312 459 aa11.91□□□□□ -0.5
RFX4-207ENST00000546882 SERPINB2P05120 415 aa11.91□□□□□ -0.5
RFX4-207ENST00000546882 HSP90AB1P08238 724 aaKnown RBP11.91□□□□□ -0.5
RFX4-207ENST00000546882 CABP4P57796 275 aa11.91□□□□□ -0.5
RFX4-207ENST00000546882 BBXQ8WY36 941 aaPredicted RBP11.91□□□□□ -0.5
RFX4-207ENST00000546882 POLKQ9UBT6 870 aa11.91□□□□□ -0.5
RFX4-207ENST00000546882 ANKRD31Q8N7Z5 1873 aa11.91□□□□□ -0.5
RFX4-207ENST00000546882 SOS1Q07889 1333 aaPredicted RBP11.9□□□□□ -0.5
RFX4-207ENST00000546882 EIF4A2Q14240 407 aaKnown RBP11.9□□□□□ -0.5
RFX4-207ENST00000546882 LDHDQ86WU2 507 aa11.9□□□□□ -0.5
RFX4-207ENST00000546882 NFATC2IPQ8NCF5 419 aa11.9□□□□□ -0.5
RFX4-207ENST00000546882 NARFQ9UHQ1 456 aa11.9□□□□□ -0.5
RFX4-207ENST00000546882 SCN4AP35499 1836 aa11.9□□□□□ -0.5
RFX4-207ENST00000546882 LTBP3Q9NS15 1303 aa11.89□□□□□ -0.51
RFX4-207ENST00000546882 RASSF10A6NK89 507 aa11.89□□□□□ -0.51
RFX4-207ENST00000546882 CCDC85CA6NKD9 419 aa11.89□□□□□ -0.51
RFX4-207ENST00000546882 H0YIN7 160 aa11.89□□□□□ -0.51
RFX4-207ENST00000546882 SNPHO15079 494 aa11.89□□□□□ -0.51
RFX4-207ENST00000546882 C21orf2O43822 256 aa11.89□□□□□ -0.51
RFX4-207ENST00000546882 TAF1DQ9H5J8 278 aaPredicted RBP11.89□□□□□ -0.51
RFX4-207ENST00000546882 ADAMTSL1Q8N6G6 1762 aa11.89□□□□□ -0.51
RFX4-207ENST00000546882 DEFB115Q30KQ5 88 aa11.88□□□□□ -0.51
RFX4-207ENST00000546882 ZNF530Q6P9A1 599 aaPredicted RBP11.88□□□□□ -0.51
RFX4-207ENST00000546882 DNAJC10Q8IXB1 793 aa11.88□□□□□ -0.51
RFX4-207ENST00000546882 COL11A2P13942 1736 aaPredicted RBP11.88□□□□□ -0.51
RFX4-207ENST00000546882 ST18O60284 1047 aa11.87□□□□□ -0.51
RFX4-207ENST00000546882 MAP2K1Q02750 393 aaPredicted RBP11.87□□□□□ -0.51
RFX4-207ENST00000546882 PLEKHO1Q53GL0 409 aaPredicted RBP11.87□□□□□ -0.51
RFX4-207ENST00000546882 WDR33Q9C0J8 1336 aaKnown RBP11.86□□□□□ -0.51
RFX4-207ENST00000546882 SLX4Q8IY92 1834 aa11.86□□□□□ -0.51
RFX4-207ENST00000546882 IQCA1LA6NCM1 817 aa11.86□□□□□ -0.51
RFX4-207ENST00000546882 CYP19A1P11511 503 aaPredicted RBP11.86□□□□□ -0.51
RFX4-207ENST00000546882 MTHFSP49914 203 aa11.86□□□□□ -0.51
RFX4-207ENST00000546882 ZNF622Q969S3 477 aaKnown RBP eCLIP11.86□□□□□ -0.51
RFX4-207ENST00000546882 TAOK3Q9H2K8 898 aa11.86□□□□□ -0.51
RFX4-207ENST00000546882 COL15A1P39059 1388 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms