RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 SNRPA1P09661 255 aaKnown RBP15.29■□□□□ 0.04
RAB5C-203ENST00000546881 ERFEQ4G0M1 354 aa15.29■□□□□ 0.04
RAB5C-203ENST00000546881 DPY19L2Q6NUT2 758 aa15.29■□□□□ 0.04
RAB5C-203ENST00000546881 BCORQ6W2J9 1755 aa15.29■□□□□ 0.04
RAB5C-203ENST00000546881 NBPF5PQ86XG9 351 aaPredicted RBP15.28■□□□□ 0.04
RAB5C-203ENST00000546881 CNKSR1Q969H4 720 aa15.28■□□□□ 0.04
RAB5C-203ENST00000546881 TAOK3Q9H2K8 898 aa15.28■□□□□ 0.04
RAB5C-203ENST00000546881 ZNF652Q9Y2D9 606 aa15.28■□□□□ 0.04
RAB5C-203ENST00000546881 CACNA1SQ13698 1873 aa15.28■□□□□ 0.04
RAB5C-203ENST00000546881 FAM177BA6PVY3 158 aa15.27■□□□□ 0.04
RAB5C-203ENST00000546881 STYK1Q6J9G0 422 aa15.27■□□□□ 0.04
RAB5C-203ENST00000546881 PRPF40BQ6NWY9 871 aaKnown RBP15.27■□□□□ 0.04
RAB5C-203ENST00000546881 MASTLQ96GX5 879 aa15.27■□□□□ 0.04
RAB5C-203ENST00000546881 SRGNP10124 158 aa15.26■□□□□ 0.03
RAB5C-203ENST00000546881 FER1L6Q2WGJ9 1857 aa15.25■□□□□ 0.03
RAB5C-203ENST00000546881 SLX4Q8IY92 1834 aa15.25■□□□□ 0.03
RAB5C-203ENST00000546881 NEFMP07197 916 aa15.25■□□□□ 0.03
RAB5C-203ENST00000546881 MIS18AQ9NYP9 233 aa15.25■□□□□ 0.03
RAB5C-203ENST00000546881 NIP7Q9Y221 180 aaKnown RBP eCLIP15.25■□□□□ 0.03
RAB5C-203ENST00000546881 POTECB2RU33 542 aa15.24■□□□□ 0.03
RAB5C-203ENST00000546881 NBPF26B4DH59 902 aa15.24■□□□□ 0.03
RAB5C-203ENST00000546881 HTATSF1O43719 755 aaKnown RBP15.24■□□□□ 0.03
RAB5C-203ENST00000546881 TAF7Q15545 349 aaPredicted RBP15.24■□□□□ 0.03
RAB5C-203ENST00000546881 SOGA3Q5TF21 947 aa15.24■□□□□ 0.03
RAB5C-203ENST00000546881 NBPF10Q6P3W6 841 aaKnown RBP15.24■□□□□ 0.03
RAB5C-203ENST00000546881 CLEC4GQ6UXB4 293 aa15.24■□□□□ 0.03
RAB5C-203ENST00000546881 NGEFQ8N5V2 710 aa15.24■□□□□ 0.03
RAB5C-203ENST00000546881 NBPF15Q8N660 670 aa15.24■□□□□ 0.03
RAB5C-203ENST00000546881 JMYQ8N9B5 988 aa15.24■□□□□ 0.03
RAB5C-203ENST00000546881 LTBP3Q9NS15 1303 aa15.23■□□□□ 0.03
RAB5C-203ENST00000546881 DDNO94850 711 aaPredicted RBP15.23■□□□□ 0.03
RAB5C-203ENST00000546881 GTF2E1P29083 439 aaPredicted RBP15.23■□□□□ 0.03
RAB5C-203ENST00000546881 TPTE2Q6XPS3 522 aa15.23■□□□□ 0.03
RAB5C-203ENST00000546881 DICER1Q9UPY3 1922 aaKnown RBP15.22■□□□□ 0.03
RAB5C-203ENST00000546881 NPR1P16066 1061 aa15.22■□□□□ 0.03
RAB5C-203ENST00000546881 CCDC93Q567U6 631 aa15.22■□□□□ 0.03
RAB5C-203ENST00000546881 ARFGEF2Q9Y6D5 1785 aa15.21■□□□□ 0.03
RAB5C-203ENST00000546881 HLFQ16534 295 aa15.21■□□□□ 0.03
RAB5C-203ENST00000546881 COL13A1Q5TAT6 717 aaPredicted RBP15.2■□□□□ 0.02
RAB5C-203ENST00000546881 OLFM4Q6UX06 510 aa15.2■□□□□ 0.02
RAB5C-203ENST00000546881 LAMB4A4D0S4 1761 aa15.19■□□□□ 0.02
RAB5C-203ENST00000546881 POTEIP0CG38 1075 aa15.19■□□□□ 0.02
RAB5C-203ENST00000546881 POTEJP0CG39 1038 aa15.19■□□□□ 0.02
RAB5C-203ENST00000546881 CHADLQ6NUI6 762 aa15.19■□□□□ 0.02
RAB5C-203ENST00000546881 PNISRQ8TF01 805 aaKnown RBP15.19■□□□□ 0.02
RAB5C-203ENST00000546881 ZNF277Q9NRM2 450 aaPredicted RBP15.19■□□□□ 0.02
RAB5C-203ENST00000546881 RRP7AQ9Y3A4 280 aaKnown RBP15.19■□□□□ 0.02
RAB5C-203ENST00000546881 MYL6BP14649 208 aa15.18■□□□□ 0.02
RAB5C-203ENST00000546881 FKBP4Q02790 459 aaKnown RBP eCLIP15.18■□□□□ 0.02
RAB5C-203ENST00000546881 C7orf43Q8WVR3 580 aa15.18■□□□□ 0.02
RAB5C-203ENST00000546881 THUMPD2Q9BTF0 503 aaKnown RBP15.18■□□□□ 0.02
RAB5C-203ENST00000546881 IQCA1LA6NCM1 817 aa15.17■□□□□ 0.02
RAB5C-203ENST00000546881 CAPN15O75808 1086 aa15.17■□□□□ 0.02
RAB5C-203ENST00000546881 KIF6Q6ZMV9 814 aa15.17■□□□□ 0.02
RAB5C-203ENST00000546881 NUTM1Q86Y26 1132 aa15.17■□□□□ 0.02
RAB5C-203ENST00000546881 DLG5Q8TDM6 1919 aa15.17■□□□□ 0.02
RAB5C-203ENST00000546881 MAPK8IP3Q9UPT6 1336 aa15.17■□□□□ 0.02
RAB5C-203ENST00000546881 KLRG2A4D1S0 409 aaPredicted RBP15.16■□□□□ 0.02
RAB5C-203ENST00000546881 RGL2O15211 777 aa15.16■□□□□ 0.02
RAB5C-203ENST00000546881 HSPA1AP0DMV8 641 aaKnown RBP15.16■□□□□ 0.02
RAB5C-203ENST00000546881 HSPA1BP0DMV9 641 aaKnown RBP15.16■□□□□ 0.02
RAB5C-203ENST00000546881 GPTP24298 496 aa15.16■□□□□ 0.02
RAB5C-203ENST00000546881 ALDH1B1P30837 517 aa15.16■□□□□ 0.02
RAB5C-203ENST00000546881 NFE2L2Q16236 605 aa15.16■□□□□ 0.02
RAB5C-203ENST00000546881 EAPPQ56P03 285 aaPredicted RBP15.16■□□□□ 0.02
RAB5C-203ENST00000546881 RTKN2Q8IZC4 609 aa15.16■□□□□ 0.02
RAB5C-203ENST00000546881 NYXQ9GZU5 481 aa15.16■□□□□ 0.02
RAB5C-203ENST00000546881 ZBTB3Q9H5J0 574 aa15.16■□□□□ 0.02
RAB5C-203ENST00000546881 MKRN1Q9UHC7 482 aaKnown RBP15.16■□□□□ 0.02
RAB5C-203ENST00000546881 KDM3BQ7LBC6 1761 aa15.16■□□□□ 0.02
RAB5C-203ENST00000546881 ZNF541Q9H0D2 1346 aa15.16■□□□□ 0.02
RAB5C-203ENST00000546881 EIF4A1P60842 406 aaKnown RBP15.15■□□□□ 0.02
RAB5C-203ENST00000546881 TTLL7Q6ZT98 887 aa15.15■□□□□ 0.02
RAB5C-203ENST00000546881 TNS4Q8IZW8 715 aa15.15■□□□□ 0.02
RAB5C-203ENST00000546881 PLEKHF1Q96S99 279 aa15.15■□□□□ 0.02
RAB5C-203ENST00000546881 CLEC11AQ9Y240 323 aa15.15■□□□□ 0.02
RAB5C-203ENST00000546881 MAP3K15Q6ZN16 1313 aa15.15■□□□□ 0.02
RAB5C-203ENST00000546881 ABCC12Q96J65 1359 aa15.14■□□□□ 0.01
RAB5C-203ENST00000546881 IARSP41252 1262 aaKnown RBP15.14■□□□□ 0.01
RAB5C-203ENST00000546881 SYNE4Q8N205 404 aa15.14■□□□□ 0.01
RAB5C-203ENST00000546881 RPGRQ92834 1020 aaKnown RBP15.14■□□□□ 0.01
RAB5C-203ENST00000546881 PNNQ9H307 717 aaKnown RBP15.14■□□□□ 0.01
RAB5C-203ENST00000546881 TAF1DQ9H5J8 278 aaPredicted RBP15.14■□□□□ 0.01
RAB5C-203ENST00000546881 CREBZFQ9NS37 354 aa15.14■□□□□ 0.01
RAB5C-203ENST00000546881 ERVV-1B6SEH8 477 aa15.13■□□□□ 0.01
RAB5C-203ENST00000546881 LDHDQ86WU2 507 aa15.13■□□□□ 0.01
RAB5C-203ENST00000546881 L3MBTL3Q96JM7 780 aaPredicted RBP15.13■□□□□ 0.01
RAB5C-203ENST00000546881 HACL1Q9UJ83 578 aa15.13■□□□□ 0.01
RAB5C-203ENST00000546881 TCERG1O14776 1098 aaKnown RBP15.12■□□□□ 0.01
RAB5C-203ENST00000546881 ZEB1P37275 1124 aaPredicted RBP15.12■□□□□ 0.01
RAB5C-203ENST00000546881 TSPYL4Q9UJ04 414 aa15.12■□□□□ 0.01
RAB5C-203ENST00000546881 SCN4AP35499 1836 aa15.12■□□□□ 0.01
RAB5C-203ENST00000546881 NUP98P52948 1817 aa15.12■□□□□ 0.01
RAB5C-203ENST00000546881 RNF123Q5XPI4 1314 aa15.12■□□□□ 0.01
RAB5C-203ENST00000546881 EIF2S2P20042 333 aaKnown RBP15.11■□□□□ 0.01
RAB5C-203ENST00000546881 EPHX2P34913 555 aa15.11■□□□□ 0.01
RAB5C-203ENST00000546881 SUSD4Q5VX71 490 aa15.11■□□□□ 0.01
RAB5C-203ENST00000546881 JDP2Q8WYK2 163 aa15.11■□□□□ 0.01
RAB5C-203ENST00000546881 UBN2Q6ZU65 1347 aa15.11■□□□□ 0.01
RAB5C-203ENST00000546881 CRY2Q49AN0 593 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms