RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 NECTIN2Q92692 538 aa18.66■□□□□ 0.58
DDX54-203ENST00000546869 CD2APQ9Y5K6 639 aa18.66■□□□□ 0.58
DDX54-203ENST00000546869 MAP3K15Q6ZN16 1313 aa18.66■□□□□ 0.58
DDX54-203ENST00000546869 POLRMTO00411 1230 aaKnown RBP18.65■□□□□ 0.58
DDX54-203ENST00000546869 TTLL7Q6ZT98 887 aa18.65■□□□□ 0.58
DDX54-203ENST00000546869 COPS6Q7L5N1 327 aa18.65■□□□□ 0.58
DDX54-203ENST00000546869 HNRNPUQ00839 825 aaKnown RBP eCLIP18.64■□□□□ 0.57
DDX54-203ENST00000546869 DDR1Q08345 913 aa18.64■□□□□ 0.57
DDX54-203ENST00000546869 TBC1D9BQ66K14 1250 aa18.64■□□□□ 0.57
DDX54-203ENST00000546869 SYT17Q9BSW7 474 aa18.64■□□□□ 0.57
DDX54-203ENST00000546869 ANXA1P04083 346 aa18.63■□□□□ 0.57
DDX54-203ENST00000546869 GIGYF2Q6Y7W6 1299 aaKnown RBP18.63■□□□□ 0.57
DDX54-203ENST00000546869 XAGE3Q8WTP9 111 aa18.63■□□□□ 0.57
DDX54-203ENST00000546869 CDCA7LQ96GN5 454 aa18.63■□□□□ 0.57
DDX54-203ENST00000546869 SETDB2Q96T68 719 aa18.63■□□□□ 0.57
DDX54-203ENST00000546869 FHDC1Q9C0D6 1143 aaPredicted RBP18.63■□□□□ 0.57
DDX54-203ENST00000546869 SCN7AQ01118 1682 aa18.63■□□□□ 0.57
DDX54-203ENST00000546869 HLFQ16534 295 aa18.62■□□□□ 0.57
DDX54-203ENST00000546869 ZNF428Q96B54 188 aa18.62■□□□□ 0.57
DDX54-203ENST00000546869 STK31Q9BXU1 1019 aa18.62■□□□□ 0.57
DDX54-203ENST00000546869 CARMIL3Q8ND23 1372 aa18.61■□□□□ 0.57
DDX54-203ENST00000546869 SERPINB2P05120 415 aa18.61■□□□□ 0.57
DDX54-203ENST00000546869 CT47B1P0C2W7 299 aaPredicted RBP18.61■□□□□ 0.57
DDX54-203ENST00000546869 ANKRD13DQ6ZTN6 518 aa18.61■□□□□ 0.57
DDX54-203ENST00000546869 PLBD2Q8NHP8 589 aa18.61■□□□□ 0.57
DDX54-203ENST00000546869 BCORQ6W2J9 1755 aa18.6■□□□□ 0.57
DDX54-203ENST00000546869 ATP10DQ9P241 1426 aa18.6■□□□□ 0.57
DDX54-203ENST00000546869 SRCAPQ6ZRS2 3230 aa18.6■□□□□ 0.57
DDX54-203ENST00000546869 ZBED9Q6R2W3 1325 aa18.6■□□□□ 0.57
DDX54-203ENST00000546869 AIMP1Q12904 312 aaKnown RBP18.6■□□□□ 0.57
DDX54-203ENST00000546869 ZNF34Q8IZ26 560 aa18.6■□□□□ 0.57
DDX54-203ENST00000546869 SLC4A2P04920 1241 aa18.59■□□□□ 0.57
DDX54-203ENST00000546869 TGFB2P61812 414 aa18.59■□□□□ 0.57
DDX54-203ENST00000546869 HSP90AB3PQ58FF7 597 aa18.59■□□□□ 0.57
DDX54-203ENST00000546869 ZBTB3Q9H5J0 574 aa18.59■□□□□ 0.57
DDX54-203ENST00000546869 PHAXQ9H814 394 aaKnown RBP18.59■□□□□ 0.57
DDX54-203ENST00000546869 BICDL1Q6ZP65 573 aa18.58■□□□□ 0.56
DDX54-203ENST00000546869 NIP7Q9Y221 180 aaKnown RBP eCLIP18.58■□□□□ 0.56
DDX54-203ENST00000546869 C10orf71Q711Q0 1435 aa18.57■□□□□ 0.56
DDX54-203ENST00000546869 DDX58O95786 925 aaKnown RBP18.57■□□□□ 0.56
DDX54-203ENST00000546869 TCIRG1Q13488 830 aa18.57■□□□□ 0.56
DDX54-203ENST00000546869 NRXN2Q9P2S2 1712 aa18.57■□□□□ 0.56
DDX54-203ENST00000546869 TRIM28Q13263 835 aaKnown RBP18.56■□□□□ 0.56
DDX54-203ENST00000546869 PARP10Q53GL7 1025 aa18.56■□□□□ 0.56
DDX54-203ENST00000546869 TPTE2Q6XPS3 522 aa18.56■□□□□ 0.56
DDX54-203ENST00000546869 IBTKQ9P2D0 1353 aaPredicted RBP18.55■□□□□ 0.56
DDX54-203ENST00000546869 PRR5LQ6MZQ0 368 aa18.55■□□□□ 0.56
DDX54-203ENST00000546869 KSR2Q6VAB6 950 aa18.55■□□□□ 0.56
DDX54-203ENST00000546869 ALDH1L2Q3SY69 923 aa18.54■□□□□ 0.56
DDX54-203ENST00000546869 RIC3Q7Z5B4 369 aa18.54■□□□□ 0.56
DDX54-203ENST00000546869 NBPF5PQ86XG9 351 aaPredicted RBP18.54■□□□□ 0.56
DDX54-203ENST00000546869 BRIP1Q9BX63 1249 aa18.54■□□□□ 0.56
DDX54-203ENST00000546869 NYXQ9GZU5 481 aa18.54■□□□□ 0.56
DDX54-203ENST00000546869 PDZRN3Q9UPQ7 1066 aa18.54■□□□□ 0.56
DDX54-203ENST00000546869 RNF123Q5XPI4 1314 aa18.53■□□□□ 0.56
DDX54-203ENST00000546869 TCERG1O14776 1098 aaKnown RBP18.53■□□□□ 0.56
DDX54-203ENST00000546869 FLIIQ13045 1269 aa18.53■□□□□ 0.56
DDX54-203ENST00000546869 PPP1R42Q7Z4L9 355 aa18.53■□□□□ 0.56
DDX54-203ENST00000546869 CNBD1Q8NA66 436 aa18.53■□□□□ 0.56
DDX54-203ENST00000546869 NLGN2Q8NFZ4 835 aa18.53■□□□□ 0.56
DDX54-203ENST00000546869 ISCA1Q9BUE6 129 aa18.53■□□□□ 0.56
DDX54-203ENST00000546869 NUP98P52948 1817 aa18.53■□□□□ 0.56
DDX54-203ENST00000546869 KIF13BQ9NQT8 1826 aa18.53■□□□□ 0.56
DDX54-203ENST00000546869 UBN2Q6ZU65 1347 aa18.52■□□□□ 0.56
DDX54-203ENST00000546869 G2E3Q7L622 706 aa18.52■□□□□ 0.56
DDX54-203ENST00000546869 KLHL34Q8N239 644 aa18.52■□□□□ 0.56
DDX54-203ENST00000546869 METTL22Q9BUU2 404 aaPredicted RBP18.52■□□□□ 0.56
DDX54-203ENST00000546869 KLRG2A4D1S0 409 aaPredicted RBP18.51■□□□□ 0.55
DDX54-203ENST00000546869 PI4KAP2A4QPH2 592 aa18.51■□□□□ 0.55
DDX54-203ENST00000546869 PDE6BP35913 854 aa18.51■□□□□ 0.55
DDX54-203ENST00000546869 BRPF1P55201 1214 aaPredicted RBP18.51■□□□□ 0.55
DDX54-203ENST00000546869 ST5P78524 1137 aa18.51■□□□□ 0.55
DDX54-203ENST00000546869 SUSD4Q5VX71 490 aa18.51■□□□□ 0.55
DDX54-203ENST00000546869 NLRP10Q86W26 655 aa18.51■□□□□ 0.55
DDX54-203ENST00000546869 PI4KAP1Q8N8J0 262 aa18.51■□□□□ 0.55
DDX54-203ENST00000546869 CACNA1FO60840 1977 aa18.5■□□□□ 0.55
DDX54-203ENST00000546869 GPTP24298 496 aa18.5■□□□□ 0.55
DDX54-203ENST00000546869 MRPL50Q8N5N7 158 aaKnown RBP18.5■□□□□ 0.55
DDX54-203ENST00000546869 AFDNP55196 1824 aaKnown RBP18.49■□□□□ 0.55
DDX54-203ENST00000546869 NTSR2O95665 410 aa18.49■□□□□ 0.55
DDX54-203ENST00000546869 KCNA3P22001 575 aa18.49■□□□□ 0.55
DDX54-203ENST00000546869 SLC10A5Q5PT55 438 aa18.49■□□□□ 0.55
DDX54-203ENST00000546869 SSH1Q8WYL5 1049 aa18.49■□□□□ 0.55
DDX54-203ENST00000546869 UTP14AQ9BVJ6 771 aaKnown RBP18.49■□□□□ 0.55
DDX54-203ENST00000546869 MAP3K2Q9Y2U5 619 aa18.49■□□□□ 0.55
DDX54-203ENST00000546869 ADCY9O60503 1353 aa18.49■□□□□ 0.55
DDX54-203ENST00000546869 PXDNLA1KZ92 1463 aa18.49■□□□□ 0.55
DDX54-203ENST00000546869 RIC1Q4ADV7 1423 aa18.49■□□□□ 0.55
DDX54-203ENST00000546869 NPHP1O15259 732 aa18.48■□□□□ 0.55
DDX54-203ENST00000546869 GTF2E1P29083 439 aaPredicted RBP18.48■□□□□ 0.55
DDX54-203ENST00000546869 FKBP5Q13451 457 aaPredicted RBP18.48■□□□□ 0.55
DDX54-203ENST00000546869 CCDC191Q8NCU4 936 aa18.48■□□□□ 0.55
DDX54-203ENST00000546869 A0A0G2JLW4 131 aa18.47■□□□□ 0.55
DDX54-203ENST00000546869 DPEP1P16444 411 aa18.47■□□□□ 0.55
DDX54-203ENST00000546869 PTPRCP08575 1304 aa18.47■□□□□ 0.55
DDX54-203ENST00000546869 DCAF8L1A6NGE4 600 aa18.46■□□□□ 0.55
DDX54-203ENST00000546869 H0YIN7 160 aa18.46■□□□□ 0.55
DDX54-203ENST00000546869 RARSP54136 660 aaKnown RBP18.46■□□□□ 0.55
DDX54-203ENST00000546869 NEXNQ0ZGT2 675 aa18.46■□□□□ 0.55
DDX54-203ENST00000546869 DNAAF4Q8WXU2 420 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms