RNA–Protein interactions for RNA: ENST00000546810.1

RAB5B-203, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-203ENST00000546810 SLC52A2Q9HAB3 445 aa17.68■□□□□ 0.42
RAB5B-203ENST00000546810 FER1L6Q2WGJ9 1857 aa17.67■□□□□ 0.42
RAB5B-203ENST00000546810 RASSF10A6NK89 507 aa17.67■□□□□ 0.42
RAB5B-203ENST00000546810 CCDC85CA6NKD9 419 aa17.67■□□□□ 0.42
RAB5B-203ENST00000546810 MAP2K1Q02750 393 aaPredicted RBP17.67■□□□□ 0.42
RAB5B-203ENST00000546810 SLC39A6Q13433 755 aa17.67■□□□□ 0.42
RAB5B-203ENST00000546810 DEFB115Q30KQ5 88 aa17.67■□□□□ 0.42
RAB5B-203ENST00000546810 EAPPQ56P03 285 aaPredicted RBP17.67■□□□□ 0.42
RAB5B-203ENST00000546810 MAPK8IP3Q9UPT6 1336 aa17.67■□□□□ 0.42
RAB5B-203ENST00000546810 VIRMAQ69YN4 1812 aaKnown RBP17.66■□□□□ 0.42
RAB5B-203ENST00000546810 CANXP27824 592 aaKnown RBP17.66■□□□□ 0.42
RAB5B-203ENST00000546810 RGS19P49795 217 aa17.66■□□□□ 0.42
RAB5B-203ENST00000546810 MTHFSDQ2M296 383 aaKnown RBP17.66■□□□□ 0.42
RAB5B-203ENST00000546810 AKAP4Q5JQC9 854 aa17.66■□□□□ 0.42
RAB5B-203ENST00000546810 SOGA3Q5TF21 947 aa17.65■□□□□ 0.42
RAB5B-203ENST00000546810 TBC1D9BQ66K14 1250 aa17.65■□□□□ 0.42
RAB5B-203ENST00000546810 PRR5LQ6MZQ0 368 aa17.65■□□□□ 0.42
RAB5B-203ENST00000546810 CCDC24Q8N4L8 307 aa17.65■□□□□ 0.42
RAB5B-203ENST00000546810 CNKSR1Q969H4 720 aa17.65■□□□□ 0.42
RAB5B-203ENST00000546810 CLEC11AQ9Y240 323 aa17.65■□□□□ 0.42
RAB5B-203ENST00000546810 WDR33Q9C0J8 1336 aaKnown RBP17.65■□□□□ 0.42
RAB5B-203ENST00000546810 LGR6Q9HBX8 967 aa17.64■□□□□ 0.41
RAB5B-203ENST00000546810 ADAMTS8Q9UP79 889 aa17.64■□□□□ 0.41
RAB5B-203ENST00000546810 ANKRD31Q8N7Z5 1873 aa17.63■□□□□ 0.41
RAB5B-203ENST00000546810 A0A087WZG4 1122 aa17.63■□□□□ 0.41
RAB5B-203ENST00000546810 CCDC184Q52MB2 194 aa17.63■□□□□ 0.41
RAB5B-203ENST00000546810 STYK1Q6J9G0 422 aa17.63■□□□□ 0.41
RAB5B-203ENST00000546810 PRPF40BQ6NWY9 871 aaKnown RBP17.63■□□□□ 0.41
RAB5B-203ENST00000546810 VSIG10Q8N0Z9 540 aa17.63■□□□□ 0.41
RAB5B-203ENST00000546810 PHACTR3Q96KR7 559 aa17.63■□□□□ 0.41
RAB5B-203ENST00000546810 SCN11AQ9UI33 1791 aa17.63■□□□□ 0.41
RAB5B-203ENST00000546810 SCN4AP35499 1836 aa17.63■□□□□ 0.41
RAB5B-203ENST00000546810 COL11A2P13942 1736 aaPredicted RBP17.62■□□□□ 0.41
RAB5B-203ENST00000546810 CCER2I3L3R5 266 aa17.62■□□□□ 0.41
RAB5B-203ENST00000546810 EIF5P55010 431 aaKnown RBP17.62■□□□□ 0.41
RAB5B-203ENST00000546810 RUNDC1Q96C34 613 aa17.62■□□□□ 0.41
RAB5B-203ENST00000546810 PLEKHF1Q96S99 279 aa17.62■□□□□ 0.41
RAB5B-203ENST00000546810 HACL1Q9UJ83 578 aa17.62■□□□□ 0.41
RAB5B-203ENST00000546810 ABT1Q9ULW3 272 aaKnown RBP17.62■□□□□ 0.41
RAB5B-203ENST00000546810 GNAT3A8MTJ3 354 aa17.61■□□□□ 0.41
RAB5B-203ENST00000546810 RNMTO43148 476 aaKnown RBP17.61■□□□□ 0.41
RAB5B-203ENST00000546810 EPHX2P34913 555 aa17.61■□□□□ 0.41
RAB5B-203ENST00000546810 CNTROBQ8N137 903 aa17.61■□□□□ 0.41
RAB5B-203ENST00000546810 PNISRQ8TF01 805 aaKnown RBP17.61■□□□□ 0.41
RAB5B-203ENST00000546810 MRC1P22897 1456 aa17.61■□□□□ 0.41
RAB5B-203ENST00000546810 NPHP1O15259 732 aa17.6■□□□□ 0.41
RAB5B-203ENST00000546810 SRGNP10124 158 aa17.6■□□□□ 0.41
RAB5B-203ENST00000546810 MAP1SQ66K74 1059 aaPredicted RBP17.6■□□□□ 0.41
RAB5B-203ENST00000546810 PNMA8AQ86V59 439 aaPredicted RBP17.6■□□□□ 0.41
RAB5B-203ENST00000546810 RTF1Q92541 710 aaKnown RBP17.6■□□□□ 0.41
RAB5B-203ENST00000546810 MASTLQ96GX5 879 aa17.6■□□□□ 0.41
RAB5B-203ENST00000546810 ZNF541Q9H0D2 1346 aa17.6■□□□□ 0.41
RAB5B-203ENST00000546810 STARD3NLO95772 234 aa17.59■□□□□ 0.41
RAB5B-203ENST00000546810 NFE2L2Q16236 605 aa17.59■□□□□ 0.41
RAB5B-203ENST00000546810 CNBD1Q8NA66 436 aa17.59■□□□□ 0.41
RAB5B-203ENST00000546810 BEGAINQ9BUH8 593 aa17.59■□□□□ 0.41
RAB5B-203ENST00000546810 SLX4Q8IY92 1834 aa17.58■□□□□ 0.41
RAB5B-203ENST00000546810 HTATSF1O43719 755 aaKnown RBP17.58■□□□□ 0.4
RAB5B-203ENST00000546810 ST5P78524 1137 aa17.58■□□□□ 0.4
RAB5B-203ENST00000546810 CCDC93Q567U6 631 aa17.58■□□□□ 0.4
RAB5B-203ENST00000546810 CCDC146Q8IYE0 955 aa17.58■□□□□ 0.4
RAB5B-203ENST00000546810 TBC1D2BQ9UPU7 963 aa17.58■□□□□ 0.4
RAB5B-203ENST00000546810 ADAMTSL1Q8N6G6 1762 aa17.58■□□□□ 0.4
RAB5B-203ENST00000546810 RNF123Q5XPI4 1314 aa17.57■□□□□ 0.4
RAB5B-203ENST00000546810 C7orf43Q8WVR3 580 aa17.57■□□□□ 0.4
RAB5B-203ENST00000546810 SETDB2Q96T68 719 aa17.57■□□□□ 0.4
RAB5B-203ENST00000546810 ZNF330Q9Y3S2 320 aaPredicted RBP17.57■□□□□ 0.4
RAB5B-203ENST00000546810 FKBP4Q02790 459 aaKnown RBP eCLIP17.56■□□□□ 0.4
RAB5B-203ENST00000546810 LMOD3Q0VAK6 560 aa17.56■□□□□ 0.4
RAB5B-203ENST00000546810 PAXIP1Q6ZW49 1069 aaPredicted RBP17.56■□□□□ 0.4
RAB5B-203ENST00000546810 CAPNS2Q96L46 248 aa17.56■□□□□ 0.4
RAB5B-203ENST00000546810 ZNF277Q9NRM2 450 aaPredicted RBP17.56■□□□□ 0.4
RAB5B-203ENST00000546810 SCN7AQ01118 1682 aa17.55■□□□□ 0.4
RAB5B-203ENST00000546810 ECE1P42892 770 aa17.55■□□□□ 0.4
RAB5B-203ENST00000546810 TEFQ10587 303 aa17.55■□□□□ 0.4
RAB5B-203ENST00000546810 FAM9BQ8IZU0 186 aa17.55■□□□□ 0.4
RAB5B-203ENST00000546810 TTC5Q8N0Z6 440 aa17.55■□□□□ 0.4
RAB5B-203ENST00000546810 MIER1Q8N108 512 aa17.55■□□□□ 0.4
RAB5B-203ENST00000546810 CFAP44Q96MT7 982 aa17.55■□□□□ 0.4
RAB5B-203ENST00000546810 DDX21Q9NR30 783 aaKnown RBP eCLIP17.55■□□□□ 0.4
RAB5B-203ENST00000546810 TMPOP42166 694 aaKnown RBP17.54■□□□□ 0.4
RAB5B-203ENST00000546810 RIPK4P57078 832 aa17.54■□□□□ 0.4
RAB5B-203ENST00000546810 GRM1Q13255 1194 aa17.54■□□□□ 0.4
RAB5B-203ENST00000546810 GPR101Q96P66 508 aaPredicted RBP17.54■□□□□ 0.4
RAB5B-203ENST00000546810 IL6STP40189 918 aaPredicted RBP17.53■□□□□ 0.4
RAB5B-203ENST00000546810 CYP4F22Q6NT55 531 aa17.53■□□□□ 0.4
RAB5B-203ENST00000546810 THSD7BQ9C0I4 1608 aa17.53■□□□□ 0.4
RAB5B-203ENST00000546810 ARFGEF2Q9Y6D5 1785 aa17.53■□□□□ 0.4
RAB5B-203ENST00000546810 FZD9O00144 591 aa17.52■□□□□ 0.4
RAB5B-203ENST00000546810 CAMTA2O94983 1202 aa17.52■□□□□ 0.4
RAB5B-203ENST00000546810 NPM2Q86SE8 214 aaKnown RBP17.52■□□□□ 0.4
RAB5B-203ENST00000546810 GPC2Q8N158 579 aa17.52■□□□□ 0.4
RAB5B-203ENST00000546810 IL17REQ8NFR9 667 aa17.52■□□□□ 0.4
RAB5B-203ENST00000546810 TSKSQ9UJT2 592 aa17.52■□□□□ 0.4
RAB5B-203ENST00000546810 CACNA1SQ13698 1873 aa17.52■□□□□ 0.39
RAB5B-203ENST00000546810 NPR1P16066 1061 aa17.51■□□□□ 0.39
RAB5B-203ENST00000546810 NEUROD2Q15784 382 aa17.51■□□□□ 0.39
RAB5B-203ENST00000546810 RTKN2Q8IZC4 609 aa17.51■□□□□ 0.39
RAB5B-203ENST00000546810 TEX13AQ9BXU3 409 aaPredicted RBP17.51■□□□□ 0.39
RAB5B-203ENST00000546810 MCOLN1Q9GZU1 580 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 162.2 ms