RNA–Protein interactions for RNA: ENST00000546592.1

GPN3-204, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 638 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-204ENST00000546592 TCERG1O14776 1098 aaKnown RBP24.77■■□□□ 1.56
GPN3-204ENST00000546592 FKBP8Q14318 412 aa24.77■■□□□ 1.56
GPN3-204ENST00000546592 CLEC4GQ6UXB4 293 aa24.77■■□□□ 1.56
GPN3-204ENST00000546592 MAP3K15Q6ZN16 1313 aa24.77■■□□□ 1.56
GPN3-204ENST00000546592 SLC4A2P04920 1241 aa24.76■■□□□ 1.55
GPN3-204ENST00000546592 YTHDC1Q96MU7 727 aaKnown RBP24.76■■□□□ 1.55
GPN3-204ENST00000546592 BCL2L12Q9HB09 334 aa24.76■■□□□ 1.55
GPN3-204ENST00000546592 SCN7AQ01118 1682 aa24.75■■□□□ 1.55
GPN3-204ENST00000546592 PTGER2P43116 358 aa24.74■■□□□ 1.55
GPN3-204ENST00000546592 ZBTB3Q9H5J0 574 aa24.74■■□□□ 1.55
GPN3-204ENST00000546592 DDX58O95786 925 aaKnown RBP24.73■■□□□ 1.55
GPN3-204ENST00000546592 MMP10P09238 476 aa24.73■■□□□ 1.55
GPN3-204ENST00000546592 SGIP1Q9BQI5 828 aa24.73■■□□□ 1.55
GPN3-204ENST00000546592 PHAXQ9H814 394 aaKnown RBP24.73■■□□□ 1.55
GPN3-204ENST00000546592 ANKRD13DQ6ZTN6 518 aa24.72■■□□□ 1.55
GPN3-204ENST00000546592 PLBD2Q8NHP8 589 aa24.72■■□□□ 1.55
GPN3-204ENST00000546592 PPP1R1BQ9UD71 204 aaPredicted RBP24.72■■□□□ 1.55
GPN3-204ENST00000546592 PARP3Q9Y6F1 533 aa24.72■■□□□ 1.55
GPN3-204ENST00000546592 BCORQ6W2J9 1755 aa24.72■■□□□ 1.55
GPN3-204ENST00000546592 COL24A1Q17RW2 1714 aa24.72■■□□□ 1.55
GPN3-204ENST00000546592 TM4SF1P30408 202 aa24.71■■□□□ 1.55
GPN3-204ENST00000546592 GIGYF2Q6Y7W6 1299 aaKnown RBP24.71■■□□□ 1.55
GPN3-204ENST00000546592 NFIXQ14938 502 aa24.7■■□□□ 1.54
GPN3-204ENST00000546592 HLFQ16534 295 aa24.7■■□□□ 1.54
GPN3-204ENST00000546592 ALDH1L2Q3SY69 923 aa24.7■■□□□ 1.54
GPN3-204ENST00000546592 HSP90AB3PQ58FF7 597 aa24.7■■□□□ 1.54
GPN3-204ENST00000546592 TBC1D9BQ66K14 1250 aa24.7■■□□□ 1.54
GPN3-204ENST00000546592 BICDL1Q6ZP65 573 aa24.7■■□□□ 1.54
GPN3-204ENST00000546592 SETDB2Q96T68 719 aa24.7■■□□□ 1.54
GPN3-204ENST00000546592 LRP5O75197 1615 aa24.69■■□□□ 1.54
GPN3-204ENST00000546592 RIC3Q7Z5B4 369 aa24.69■■□□□ 1.54
GPN3-204ENST00000546592 CACNA1FO60840 1977 aa24.68■■□□□ 1.54
GPN3-204ENST00000546592 FLIIQ13045 1269 aa24.68■■□□□ 1.54
GPN3-204ENST00000546592 NIP7Q9Y221 180 aaKnown RBP eCLIP24.68■■□□□ 1.54
GPN3-204ENST00000546592 G2E3Q7L622 706 aa24.67■■□□□ 1.54
GPN3-204ENST00000546592 SSH1Q8WYL5 1049 aa24.67■■□□□ 1.54
GPN3-204ENST00000546592 POLRMTO00411 1230 aaKnown RBP24.66■■□□□ 1.54
GPN3-204ENST00000546592 DDR1Q08345 913 aa24.66■■□□□ 1.54
GPN3-204ENST00000546592 FKBP5Q13451 457 aaPredicted RBP24.66■■□□□ 1.54
GPN3-204ENST00000546592 SMC4Q9NTJ3 1288 aa24.66■■□□□ 1.54
GPN3-204ENST00000546592 ATP10DQ9P241 1426 aa24.66■■□□□ 1.54
GPN3-204ENST00000546592 CARMIL3Q8ND23 1372 aa24.66■■□□□ 1.54
GPN3-204ENST00000546592 MRPL50Q8N5N7 158 aaKnown RBP24.65■■□□□ 1.54
GPN3-204ENST00000546592 SERPINB2P05120 415 aa24.64■■□□□ 1.54
GPN3-204ENST00000546592 TCIRG1Q13488 830 aa24.64■■□□□ 1.54
GPN3-204ENST00000546592 KSR2Q6VAB6 950 aa24.64■■□□□ 1.54
GPN3-204ENST00000546592 NPHP1O15259 732 aa24.63■■□□□ 1.53
GPN3-204ENST00000546592 RARSP54136 660 aaKnown RBP24.63■■□□□ 1.53
GPN3-204ENST00000546592 PARP10Q53GL7 1025 aa24.63■■□□□ 1.53
GPN3-204ENST00000546592 BCL2L13Q9BXK5 485 aa24.63■■□□□ 1.53
GPN3-204ENST00000546592 NUP98P52948 1817 aa24.63■■□□□ 1.53
GPN3-204ENST00000546592 PI4KAP2A4QPH2 592 aa24.62■■□□□ 1.53
GPN3-204ENST00000546592 GPTP24298 496 aa24.62■■□□□ 1.53
GPN3-204ENST00000546592 ZNF34Q8IZ26 560 aa24.62■■□□□ 1.53
GPN3-204ENST00000546592 PI4KAP1Q8N8J0 262 aa24.62■■□□□ 1.53
GPN3-204ENST00000546592 MAP3K2Q9Y2U5 619 aa24.62■■□□□ 1.53
GPN3-204ENST00000546592 NBPF5PQ86XG9 351 aaPredicted RBP24.61■■□□□ 1.53
GPN3-204ENST00000546592 NEXNQ0ZGT2 675 aa24.6■■□□□ 1.53
GPN3-204ENST00000546592 TPTE2Q6XPS3 522 aa24.6■■□□□ 1.53
GPN3-204ENST00000546592 PPP1R42Q7Z4L9 355 aa24.6■■□□□ 1.53
GPN3-204ENST00000546592 KLHL34Q8N239 644 aa24.6■■□□□ 1.53
GPN3-204ENST00000546592 METTL22Q9BUU2 404 aaPredicted RBP24.6■■□□□ 1.53
GPN3-204ENST00000546592 NYXQ9GZU5 481 aa24.6■■□□□ 1.53
GPN3-204ENST00000546592 PTPRCP08575 1304 aa24.6■■□□□ 1.53
GPN3-204ENST00000546592 ADCY9O60503 1353 aa24.59■■□□□ 1.53
GPN3-204ENST00000546592 BRPF1P55201 1214 aaPredicted RBP24.59■■□□□ 1.53
GPN3-204ENST00000546592 CNBD1Q8NA66 436 aa24.59■■□□□ 1.53
GPN3-204ENST00000546592 ARFGEF2Q9Y6D5 1785 aa24.58■■□□□ 1.53
GPN3-204ENST00000546592 FAM177BA6PVY3 158 aa24.58■■□□□ 1.53
GPN3-204ENST00000546592 GTF2E1P29083 439 aaPredicted RBP24.58■■□□□ 1.53
GPN3-204ENST00000546592 DNAAF4Q8WXU2 420 aa24.58■■□□□ 1.53
GPN3-204ENST00000546592 MYD88Q99836 296 aa24.58■■□□□ 1.53
GPN3-204ENST00000546592 CD2APQ9Y5K6 639 aa24.58■■□□□ 1.53
GPN3-204ENST00000546592 UBN2Q6ZU65 1347 aa24.58■■□□□ 1.52
GPN3-204ENST00000546592 ATP5J2-PTCD1G3V325 749 aa24.57■■□□□ 1.52
GPN3-204ENST00000546592 ST5P78524 1137 aa24.57■■□□□ 1.52
GPN3-204ENST00000546592 TRIM28Q13263 835 aaKnown RBP24.57■■□□□ 1.52
GPN3-204ENST00000546592 NLRP10Q86W26 655 aa24.57■■□□□ 1.52
GPN3-204ENST00000546592 ISCA1Q9BUE6 129 aa24.57■■□□□ 1.52
GPN3-204ENST00000546592 KIF16BQ96L93 1317 aa24.57■■□□□ 1.52
GPN3-204ENST00000546592 IBTKQ9P2D0 1353 aaPredicted RBP24.56■■□□□ 1.52
GPN3-204ENST00000546592 SUSD4Q5VX71 490 aa24.56■■□□□ 1.52
GPN3-204ENST00000546592 PRR5LQ6MZQ0 368 aa24.56■■□□□ 1.52
GPN3-204ENST00000546592 FHDC1Q9C0D6 1143 aaPredicted RBP24.56■■□□□ 1.52
GPN3-204ENST00000546592 ANKRD36CQ5JPF3 1778 aa24.56■■□□□ 1.52
GPN3-204ENST00000546592 UTP14AQ9BVJ6 771 aaKnown RBP24.55■■□□□ 1.52
GPN3-204ENST00000546592 NRXN2Q9P2S2 1712 aa24.55■■□□□ 1.52
GPN3-204ENST00000546592 C10orf71Q711Q0 1435 aa24.54■■□□□ 1.52
GPN3-204ENST00000546592 CCDC191Q8NCU4 936 aa24.54■■□□□ 1.52
GPN3-204ENST00000546592 NOB1Q9ULX3 412 aaKnown RBP24.54■■□□□ 1.52
GPN3-204ENST00000546592 RNF123Q5XPI4 1314 aa24.54■■□□□ 1.52
GPN3-204ENST00000546592 F6X3S4 739 aa24.53■■□□□ 1.52
GPN3-204ENST00000546592 IPO8O15397 1037 aaKnown RBP24.53■■□□□ 1.52
GPN3-204ENST00000546592 AFDNP55196 1824 aaKnown RBP24.53■■□□□ 1.52
GPN3-204ENST00000546592 BCAR3O75815 825 aa24.52■■□□□ 1.52
GPN3-204ENST00000546592 NTSR2O95665 410 aa24.52■■□□□ 1.52
GPN3-204ENST00000546592 LINS1Q8NG48 757 aa24.52■■□□□ 1.52
GPN3-204ENST00000546592 SYT17Q9BSW7 474 aa24.52■■□□□ 1.52
GPN3-204ENST00000546592 API5Q9BZZ5 524 aaKnown RBP24.52■■□□□ 1.52
GPN3-204ENST00000546592 CWC25Q9NXE8 425 aaPredicted RBP24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms