RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 ARFGEF2Q9Y6D5 1785 aa24.78■■□□□ 1.56
CHERP-204ENST00000546538 SRGNP10124 158 aa24.78■■□□□ 1.56
CHERP-204ENST00000546538 NFE2L2Q16236 605 aa24.78■■□□□ 1.56
CHERP-204ENST00000546538 CLEC4GQ6UXB4 293 aa24.78■■□□□ 1.56
CHERP-204ENST00000546538 ZC3H4Q9UPT8 1303 aaKnown RBP24.77■■□□□ 1.56
CHERP-204ENST00000546538 HLFQ16534 295 aa24.77■■□□□ 1.56
CHERP-204ENST00000546538 DNAJC5GQ8N7S2 189 aa24.77■■□□□ 1.56
CHERP-204ENST00000546538 NPM2Q86SE8 214 aaKnown RBP24.76■■□□□ 1.55
CHERP-204ENST00000546538 PDZRN3Q9UPQ7 1066 aa24.76■■□□□ 1.55
CHERP-204ENST00000546538 PCNTO95613 3336 aa24.75■■□□□ 1.55
CHERP-204ENST00000546538 APLP1P51693 650 aa24.75■■□□□ 1.55
CHERP-204ENST00000546538 EIF4A1P60842 406 aaKnown RBP24.75■■□□□ 1.55
CHERP-204ENST00000546538 DICER1Q9UPY3 1922 aaKnown RBP24.74■■□□□ 1.55
CHERP-204ENST00000546538 WDR90Q96KV7 1748 aa24.74■■□□□ 1.55
CHERP-204ENST00000546538 ST5P78524 1137 aa24.74■■□□□ 1.55
CHERP-204ENST00000546538 STYK1Q6J9G0 422 aa24.74■■□□□ 1.55
CHERP-204ENST00000546538 GLTPD2A6NH11 291 aa24.73■■□□□ 1.55
CHERP-204ENST00000546538 HTRA3P83110 453 aa24.73■■□□□ 1.55
CHERP-204ENST00000546538 PRPF40BQ6NWY9 871 aaKnown RBP24.73■■□□□ 1.55
CHERP-204ENST00000546538 NBPF5PQ86XG9 351 aaPredicted RBP24.73■■□□□ 1.55
CHERP-204ENST00000546538 KLRG2A4D1S0 409 aaPredicted RBP24.72■■□□□ 1.55
CHERP-204ENST00000546538 POTECB2RU33 542 aa24.72■■□□□ 1.55
CHERP-204ENST00000546538 RGL2O15211 777 aa24.72■■□□□ 1.55
CHERP-204ENST00000546538 C7orf43Q8WVR3 580 aa24.72■■□□□ 1.55
CHERP-204ENST00000546538 NIP7Q9Y221 180 aaKnown RBP eCLIP24.72■■□□□ 1.55
CHERP-204ENST00000546538 MASTLQ96GX5 879 aa24.71■■□□□ 1.55
CHERP-204ENST00000546538 ZNF652Q9Y2D9 606 aa24.71■■□□□ 1.55
CHERP-204ENST00000546538 CNKSR1Q969H4 720 aa24.7■■□□□ 1.55
CHERP-204ENST00000546538 LTBP3Q9NS15 1303 aa24.7■■□□□ 1.54
CHERP-204ENST00000546538 NPHP1O15259 732 aa24.69■■□□□ 1.54
CHERP-204ENST00000546538 FSTL1Q12841 308 aa24.69■■□□□ 1.54
CHERP-204ENST00000546538 TTLL7Q6ZT98 887 aa24.69■■□□□ 1.54
CHERP-204ENST00000546538 C16orf71Q8IYS4 520 aaPredicted RBP24.69■■□□□ 1.54
CHERP-204ENST00000546538 PNISRQ8TF01 805 aaKnown RBP24.69■■□□□ 1.54
CHERP-204ENST00000546538 NUP98P52948 1817 aa24.69■■□□□ 1.54
CHERP-204ENST00000546538 FAM177BA6PVY3 158 aa24.69■■□□□ 1.54
CHERP-204ENST00000546538 NEFMP07197 916 aa24.68■■□□□ 1.54
CHERP-204ENST00000546538 OLFM4Q6UX06 510 aa24.68■■□□□ 1.54
CHERP-204ENST00000546538 NGEFQ8N5V2 710 aa24.68■■□□□ 1.54
CHERP-204ENST00000546538 ABCC12Q96J65 1359 aa24.67■■□□□ 1.54
CHERP-204ENST00000546538 TAOK3Q9H2K8 898 aa24.67■■□□□ 1.54
CHERP-204ENST00000546538 MAPK8IP3Q9UPT6 1336 aa24.67■■□□□ 1.54
CHERP-204ENST00000546538 RALBP1Q15311 655 aa24.66■■□□□ 1.54
CHERP-204ENST00000546538 ERFEQ4G0M1 354 aa24.66■■□□□ 1.54
CHERP-204ENST00000546538 TPTE2Q6XPS3 522 aa24.66■■□□□ 1.54
CHERP-204ENST00000546538 LRP10Q7Z4F1 713 aa24.66■■□□□ 1.54
CHERP-204ENST00000546538 RRP7AQ9Y3A4 280 aaKnown RBP24.66■■□□□ 1.54
CHERP-204ENST00000546538 VEGFAP15692 232 aaPredicted RBP24.65■■□□□ 1.54
CHERP-204ENST00000546538 NPR1P16066 1061 aa24.65■■□□□ 1.54
CHERP-204ENST00000546538 DDX10Q13206 875 aaKnown RBP24.65■■□□□ 1.54
CHERP-204ENST00000546538 MAP3K15Q6ZN16 1313 aa24.65■■□□□ 1.54
CHERP-204ENST00000546538 MYL6BP14649 208 aa24.64■■□□□ 1.54
CHERP-204ENST00000546538 UBN2Q6ZU65 1347 aa24.64■■□□□ 1.54
CHERP-204ENST00000546538 SNED1Q8TER0 1413 aa24.63■■□□□ 1.53
CHERP-204ENST00000546538 ERVV-1B6SEH8 477 aa24.63■■□□□ 1.53
CHERP-204ENST00000546538 NUTM1Q86Y26 1132 aa24.63■■□□□ 1.53
CHERP-204ENST00000546538 RIPK4P57078 832 aa24.62■■□□□ 1.53
CHERP-204ENST00000546538 PDIA6Q15084 440 aa24.62■■□□□ 1.53
CHERP-204ENST00000546538 SMC1BQ8NDV3 1235 aa24.62■■□□□ 1.53
CHERP-204ENST00000546538 TMPOP42166 694 aaKnown RBP24.61■■□□□ 1.53
CHERP-204ENST00000546538 PNNQ9H307 717 aaKnown RBP24.61■■□□□ 1.53
CHERP-204ENST00000546538 ZBTB3Q9H5J0 574 aa24.61■■□□□ 1.53
CHERP-204ENST00000546538 PROSER3Q2NL68 480 aa24.61■■□□□ 1.53
CHERP-204ENST00000546538 CRY2Q49AN0 593 aa24.61■■□□□ 1.53
CHERP-204ENST00000546538 SLC51AQ86UW1 340 aa24.61■■□□□ 1.53
CHERP-204ENST00000546538 TSPYL4Q9UJ04 414 aa24.61■■□□□ 1.53
CHERP-204ENST00000546538 GPTP24298 496 aa24.6■■□□□ 1.53
CHERP-204ENST00000546538 SOGA3Q5TF21 947 aa24.6■■□□□ 1.53
CHERP-204ENST00000546538 MYBBP1AQ9BQG0 1328 aaKnown RBP24.59■■□□□ 1.53
CHERP-204ENST00000546538 DDNO94850 711 aaPredicted RBP24.59■■□□□ 1.53
CHERP-204ENST00000546538 CCDC93Q567U6 631 aa24.59■■□□□ 1.53
CHERP-204ENST00000546538 CCDC146Q8IYE0 955 aa24.59■■□□□ 1.53
CHERP-204ENST00000546538 ZNF34Q8IZ26 560 aa24.59■■□□□ 1.53
CHERP-204ENST00000546538 ANXA1P04083 346 aa24.58■■□□□ 1.53
CHERP-204ENST00000546538 SUSD4Q5VX71 490 aa24.58■■□□□ 1.53
CHERP-204ENST00000546538 KLRG1Q96E93 195 aa24.58■■□□□ 1.53
CHERP-204ENST00000546538 ERBB4Q15303 1308 aa24.57■■□□□ 1.52
CHERP-204ENST00000546538 POTEIP0CG38 1075 aa24.57■■□□□ 1.52
CHERP-204ENST00000546538 POTEJP0CG39 1038 aa24.57■■□□□ 1.52
CHERP-204ENST00000546538 DPY19L2Q6NUT2 758 aa24.57■■□□□ 1.52
CHERP-204ENST00000546538 KIF6Q6ZMV9 814 aa24.57■■□□□ 1.52
CHERP-204ENST00000546538 C3orf67Q6ZVT6 689 aa24.57■■□□□ 1.52
CHERP-204ENST00000546538 ZNF277Q9NRM2 450 aaPredicted RBP24.57■■□□□ 1.52
CHERP-204ENST00000546538 IBTKQ9P2D0 1353 aaPredicted RBP24.57■■□□□ 1.52
CHERP-204ENST00000546538 RIC1Q4ADV7 1423 aa24.56■■□□□ 1.52
CHERP-204ENST00000546538 FKBP4Q02790 459 aaKnown RBP eCLIP24.56■■□□□ 1.52
CHERP-204ENST00000546538 COL4A5P29400 1685 aa24.55■■□□□ 1.52
CHERP-204ENST00000546538 NTSR2O95665 410 aa24.55■■□□□ 1.52
CHERP-204ENST00000546538 KRT24Q2M2I5 525 aa24.55■■□□□ 1.52
CHERP-204ENST00000546538 IFFO2Q5TF58 517 aa24.55■■□□□ 1.52
CHERP-204ENST00000546538 TRIM35Q9UPQ4 493 aa24.55■■□□□ 1.52
CHERP-204ENST00000546538 EIF2S2P20042 333 aaKnown RBP24.54■■□□□ 1.52
CHERP-204ENST00000546538 GIGYF2Q6Y7W6 1299 aaKnown RBP24.54■■□□□ 1.52
CHERP-204ENST00000546538 NYXQ9GZU5 481 aa24.54■■□□□ 1.52
CHERP-204ENST00000546538 ZNF541Q9H0D2 1346 aa24.54■■□□□ 1.52
CHERP-204ENST00000546538 GTF2E1P29083 439 aaPredicted RBP24.53■■□□□ 1.52
CHERP-204ENST00000546538 JMYQ8N9B5 988 aa24.53■■□□□ 1.52
CHERP-204ENST00000546538 BABAM1Q9NWV8 329 aa24.53■■□□□ 1.52
CHERP-204ENST00000546538 ALDH1B1P30837 517 aa24.52■■□□□ 1.52
CHERP-204ENST00000546538 HOXA10P31260 410 aaPredicted RBP24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms