RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 EXOC5O00471 708 aa14.78□□□□□ -0.04
CCDC38-202ENST00000546386 CD2BP2O95400 341 aaKnown RBP14.78□□□□□ -0.04
CCDC38-202ENST00000546386 GPTP24298 496 aa14.78□□□□□ -0.04
CCDC38-202ENST00000546386 CCDC8Q9H0W5 538 aaPredicted RBP14.78□□□□□ -0.04
CCDC38-202ENST00000546386 HEG1Q9ULI3 1381 aa14.78□□□□□ -0.04
CCDC38-202ENST00000546386 A0A087WZG4 1122 aa14.77□□□□□ -0.04
CCDC38-202ENST00000546386 TBC1D2Q9BYX2 928 aa14.77□□□□□ -0.04
CCDC38-202ENST00000546386 NEURL1BA8MQ27 555 aa14.77□□□□□ -0.05
CCDC38-202ENST00000546386 HOXB7P09629 217 aa14.77□□□□□ -0.05
CCDC38-202ENST00000546386 LRP10Q7Z4F1 713 aa14.77□□□□□ -0.05
CCDC38-202ENST00000546386 SLC4A9Q96Q91 983 aa14.77□□□□□ -0.05
CCDC38-202ENST00000546386 IL25Q9H293 177 aa14.77□□□□□ -0.05
CCDC38-202ENST00000546386 DDX58O95786 925 aaKnown RBP14.76□□□□□ -0.05
CCDC38-202ENST00000546386 HSP90AB1P08238 724 aaKnown RBP14.76□□□□□ -0.05
CCDC38-202ENST00000546386 MX1P20591 662 aa14.76□□□□□ -0.05
CCDC38-202ENST00000546386 NEXNQ0ZGT2 675 aa14.76□□□□□ -0.05
CCDC38-202ENST00000546386 NGLY1Q96IV0 654 aa14.76□□□□□ -0.05
CCDC38-202ENST00000546386 KDM3BQ7LBC6 1761 aa14.76□□□□□ -0.05
CCDC38-202ENST00000546386 RHPN1Q8TCX5 695 aa14.76□□□□□ -0.05
CCDC38-202ENST00000546386 ATG3Q9NT62 314 aa14.76□□□□□ -0.05
CCDC38-202ENST00000546386 TLR7Q9NYK1 1049 aaKnown RBP14.76□□□□□ -0.05
CCDC38-202ENST00000546386 GCKRQ14397 625 aa14.75□□□□□ -0.05
CCDC38-202ENST00000546386 NOL8Q76FK4 1167 aaKnown RBP14.75□□□□□ -0.05
CCDC38-202ENST00000546386 LINS1Q8NG48 757 aa14.75□□□□□ -0.05
CCDC38-202ENST00000546386 DDRGK1Q96HY6 314 aa14.75□□□□□ -0.05
CCDC38-202ENST00000546386 TBC1D2BQ9UPU7 963 aa14.75□□□□□ -0.05
CCDC38-202ENST00000546386 CHGBP05060 677 aa14.75□□□□□ -0.05
CCDC38-202ENST00000546386 SSH3Q8TE77 659 aa14.75□□□□□ -0.05
CCDC38-202ENST00000546386 ZNF594Q96JF6 807 aaPredicted RBP14.74□□□□□ -0.05
CCDC38-202ENST00000546386 CRYBG1Q9Y4K1 1723 aa14.74□□□□□ -0.05
CCDC38-202ENST00000546386 EDC3Q96F86 508 aaKnown RBP14.74□□□□□ -0.05
CCDC38-202ENST00000546386 C5P01031 1676 aa14.73□□□□□ -0.05
CCDC38-202ENST00000546386 FAM89AQ96GI7 184 aa14.73□□□□□ -0.05
CCDC38-202ENST00000546386 METTL22Q9BUU2 404 aaPredicted RBP14.73□□□□□ -0.05
CCDC38-202ENST00000546386 TOM1O60784 492 aa14.73□□□□□ -0.05
CCDC38-202ENST00000546386 IBTKQ9P2D0 1353 aaPredicted RBP14.72□□□□□ -0.05
CCDC38-202ENST00000546386 CDC45O75419 566 aa14.72□□□□□ -0.05
CCDC38-202ENST00000546386 DDB1Q16531 1140 aa14.72□□□□□ -0.05
CCDC38-202ENST00000546386 HLFQ16534 295 aa14.72□□□□□ -0.05
CCDC38-202ENST00000546386 ERVV-2B6SEH9 535 aa14.72□□□□□ -0.05
CCDC38-202ENST00000546386 AACSQ86V21 672 aa14.72□□□□□ -0.05
CCDC38-202ENST00000546386 LMBR1LQ6UX01 489 aa14.71□□□□□ -0.05
CCDC38-202ENST00000546386 MARCH10Q8NA82 808 aaPredicted RBP14.71□□□□□ -0.05
CCDC38-202ENST00000546386 LARP6Q9BRS8 491 aaKnown RBP14.71□□□□□ -0.05
CCDC38-202ENST00000546386 SCN11AQ9UI33 1791 aa14.71□□□□□ -0.05
CCDC38-202ENST00000546386 ZBTB1Q9Y2K1 713 aa14.71□□□□□ -0.06
CCDC38-202ENST00000546386 FRAT2O75474 233 aaPredicted RBP14.7□□□□□ -0.06
CCDC38-202ENST00000546386 SASH1O94885 1247 aa14.7□□□□□ -0.06
CCDC38-202ENST00000546386 POLA2Q14181 598 aa14.7□□□□□ -0.06
CCDC38-202ENST00000546386 KIF2CQ99661 725 aa14.7□□□□□ -0.06
CCDC38-202ENST00000546386 SLFNL1Q499Z3 407 aa14.69□□□□□ -0.06
CCDC38-202ENST00000546386 EAF2Q96CJ1 260 aaPredicted RBP14.69□□□□□ -0.06
CCDC38-202ENST00000546386 CWC27Q6UX04 472 aaKnown RBP14.69□□□□□ -0.06
CCDC38-202ENST00000546386 BOLA2Q9H3K6 86 aa14.69□□□□□ -0.06
CCDC38-202ENST00000546386 ANO2Q9NQ90 1003 aa14.69□□□□□ -0.06
CCDC38-202ENST00000546386 NKX1-1Q15270 411 aaPredicted RBP14.68□□□□□ -0.06
CCDC38-202ENST00000546386 ALDH1L1O75891 902 aa14.68□□□□□ -0.06
CCDC38-202ENST00000546386 G3BP1Q13283 466 aaKnown RBP eCLIP14.68□□□□□ -0.06
CCDC38-202ENST00000546386 PLBD2Q8NHP8 589 aa14.67□□□□□ -0.06
CCDC38-202ENST00000546386 KIF1BPQ96EK5 621 aa14.67□□□□□ -0.06
CCDC38-202ENST00000546386 SIPA1L3O60292 1781 aaPredicted RBP14.67□□□□□ -0.06
CCDC38-202ENST00000546386 IFIT2P09913 472 aaKnown RBP14.67□□□□□ -0.06
CCDC38-202ENST00000546386 TFCP2Q12800 502 aa14.67□□□□□ -0.06
CCDC38-202ENST00000546386 PUS3Q9BZE2 481 aaKnown RBP14.67□□□□□ -0.06
CCDC38-202ENST00000546386 SPATA31A1Q5TZJ5 1347 aa14.67□□□□□ -0.06
CCDC38-202ENST00000546386 TIMM10P62072 90 aa14.66□□□□□ -0.06
CCDC38-202ENST00000546386 CCDC24Q8N4L8 307 aa14.66□□□□□ -0.06
CCDC38-202ENST00000546386 ABCA3Q99758 1704 aa14.66□□□□□ -0.06
CCDC38-202ENST00000546386 LTBP4Q8N2S1 1624 aa14.66□□□□□ -0.06
CCDC38-202ENST00000546386 ATP6V1AP38606 617 aa14.66□□□□□ -0.06
CCDC38-202ENST00000546386 CLASRPQ8N2M8 674 aaKnown RBP14.66□□□□□ -0.06
CCDC38-202ENST00000546386 NEUROD6Q96NK8 337 aa14.66□□□□□ -0.06
CCDC38-202ENST00000546386 PALD1Q9ULE6 856 aa14.66□□□□□ -0.06
CCDC38-202ENST00000546386 NHSL1Q5SYE7 1610 aa14.65□□□□□ -0.06
CCDC38-202ENST00000546386 MYCNP04198 464 aaPredicted RBP14.65□□□□□ -0.06
CCDC38-202ENST00000546386 NFKBIBQ15653 356 aa14.65□□□□□ -0.06
CCDC38-202ENST00000546386 LRRC24Q50LG9 513 aa14.65□□□□□ -0.06
CCDC38-202ENST00000546386 PI4K2BQ8TCG2 481 aa14.65□□□□□ -0.06
CCDC38-202ENST00000546386 SALL3Q9BXA9 1300 aa14.65□□□□□ -0.06
CCDC38-202ENST00000546386 BECN1Q14457 450 aa14.65□□□□□ -0.06
CCDC38-202ENST00000546386 USP26Q9BXU7 913 aa14.65□□□□□ -0.06
CCDC38-202ENST00000546386 HSP90AA1P07900 732 aaKnown RBP14.64□□□□□ -0.07
CCDC38-202ENST00000546386 UPF3BQ9BZI7 483 aaKnown RBP14.64□□□□□ -0.07
CCDC38-202ENST00000546386 CACNA1FO60840 1977 aa14.64□□□□□ -0.07
CCDC38-202ENST00000546386 PTPN12Q05209 780 aaKnown RBP14.64□□□□□ -0.07
CCDC38-202ENST00000546386 BICDL1Q6ZP65 573 aa14.64□□□□□ -0.07
CCDC38-202ENST00000546386 SNAP23O00161 211 aa14.63□□□□□ -0.07
CCDC38-202ENST00000546386 STARD3NLO95772 234 aa14.63□□□□□ -0.07
CCDC38-202ENST00000546386 CPA1P15085 419 aa14.63□□□□□ -0.07
CCDC38-202ENST00000546386 CHMLP26374 656 aa14.63□□□□□ -0.07
CCDC38-202ENST00000546386 CHMP4AQ9BY43 222 aa14.63□□□□□ -0.07
CCDC38-202ENST00000546386 CWC25Q9NXE8 425 aaPredicted RBP14.63□□□□□ -0.07
CCDC38-202ENST00000546386 FOXD4L5Q5VV16 416 aaPredicted RBP14.63□□□□□ -0.07
CCDC38-202ENST00000546386 FOXD4L4Q8WXT5 416 aaPredicted RBP14.63□□□□□ -0.07
CCDC38-202ENST00000546386 DNAJC2Q99543 621 aaKnown RBP14.63□□□□□ -0.07
CCDC38-202ENST00000546386 CYP19A1P11511 503 aaPredicted RBP14.62□□□□□ -0.07
CCDC38-202ENST00000546386 HSPA1LP34931 641 aa14.62□□□□□ -0.07
CCDC38-202ENST00000546386 MEX3CQ5U5Q3 659 aaKnown RBP14.62□□□□□ -0.07
CCDC38-202ENST00000546386 ITPK1Q13572 414 aa14.62□□□□□ -0.07
CCDC38-202ENST00000546386 COL9A3Q14050 684 aaPredicted RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms