RNA–Protein interactions for RNA: ENST00000546312.5

SLC3A2-223, Transcript of solute carrier family 3 member 2, human

TSL 2

Gene SLC3A2, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC3A2-223	ENST00000546312	TTC5	Q8N0Z6	440 aa		11.56	□□□□□ -0.56
SLC3A2-223	ENST00000546312	GCC1	Q96CN9	775 aa		11.56	□□□□□ -0.56
SLC3A2-223	ENST00000546312	BABAM1	Q9NWV8	329 aa		11.56	□□□□□ -0.56
SLC3A2-223	ENST00000546312	CCNL1	Q9UK58	526 aa	Predicted RBP	11.56	□□□□□ -0.56
SLC3A2-223	ENST00000546312	MRC1	P22897	1456 aa		11.56	□□□□□ -0.56
SLC3A2-223	ENST00000546312	TAF1L	Q8IZX4	1826 aa		11.56	□□□□□ -0.56
SLC3A2-223	ENST00000546312	PALLD	Q8WX93	1383 aa		11.55	□□□□□ -0.56
SLC3A2-223	ENST00000546312	LOC102724428	A0A0B4J2F2	783 aa		11.55	□□□□□ -0.56
SLC3A2-223	ENST00000546312	TRIM27	P14373	513 aa		11.55	□□□□□ -0.56
SLC3A2-223	ENST00000546312	SIK1	P57059	783 aa		11.55	□□□□□ -0.56
SLC3A2-223	ENST00000546312	DCTN1	Q14203	1278 aa		11.55	□□□□□ -0.56
SLC3A2-223	ENST00000546312	ZNF467	Q7Z7K2	595 aa	Predicted RBP	11.55	□□□□□ -0.56
SLC3A2-223	ENST00000546312	ITPRIP	Q8IWB1	547 aa		11.55	□□□□□ -0.56
SLC3A2-223	ENST00000546312	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.55	□□□□□ -0.56
SLC3A2-223	ENST00000546312	NOB1	Q9ULX3	412 aa	Known RBP	11.55	□□□□□ -0.56
SLC3A2-223	ENST00000546312	ATP6V1A	P38606	617 aa		11.54	□□□□□ -0.56
SLC3A2-223	ENST00000546312	ZNF790	Q6PG37	636 aa		11.54	□□□□□ -0.56
SLC3A2-223	ENST00000546312	VSIG10	Q8N0Z9	540 aa		11.54	□□□□□ -0.56
SLC3A2-223	ENST00000546312	TSR2	Q969E8	191 aa	Known RBP	11.54	□□□□□ -0.56
SLC3A2-223	ENST00000546312	NUP188	Q5SRE5	1749 aa		11.54	□□□□□ -0.56
SLC3A2-223	ENST00000546312	PTCD1	O75127	700 aa	Known RBP	11.53	□□□□□ -0.56
SLC3A2-223	ENST00000546312	VAMP4	O75379	141 aa		11.53	□□□□□ -0.56
SLC3A2-223	ENST00000546312	SLC39A6	Q13433	755 aa		11.53	□□□□□ -0.56
SLC3A2-223	ENST00000546312	SMC5	Q8IY18	1101 aa		11.53	□□□□□ -0.56
SLC3A2-223	ENST00000546312	FMNL2	Q96PY5	1086 aa		11.53	□□□□□ -0.56
SLC3A2-223	ENST00000546312	ZBTB40	Q9NUA8	1239 aa		11.53	□□□□□ -0.56
SLC3A2-223	ENST00000546312	STK32B	Q9NY57	414 aa		11.53	□□□□□ -0.56
SLC3A2-223	ENST00000546312	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	11.52	□□□□□ -0.57
SLC3A2-223	ENST00000546312	ZFP91	Q96JP5	570 aa	Predicted RBP	11.52	□□□□□ -0.57
SLC3A2-223	ENST00000546312	LRRC4B	Q9NT99	713 aa		11.52	□□□□□ -0.57
SLC3A2-223	ENST00000546312	PDZRN3	Q9UPQ7	1066 aa		11.52	□□□□□ -0.57
SLC3A2-223	ENST00000546312	PCDHB15	Q9Y5E8	787 aa		11.52	□□□□□ -0.57
SLC3A2-223	ENST00000546312	PAPPA	Q13219	1627 aa		11.52	□□□□□ -0.57
SLC3A2-223	ENST00000546312	C5	P01031	1676 aa		11.52	□□□□□ -0.57
SLC3A2-223	ENST00000546312	UBR2	Q8IWV8	1755 aa		11.51	□□□□□ -0.57
SLC3A2-223	ENST00000546312	RLBP1	P12271	317 aa		11.51	□□□□□ -0.57
SLC3A2-223	ENST00000546312	SLC15A2	Q16348	729 aa		11.51	□□□□□ -0.57
SLC3A2-223	ENST00000546312	TWISTNB	Q3B726	338 aa	Predicted RBP	11.51	□□□□□ -0.57
SLC3A2-223	ENST00000546312	RC3H1	Q5TC82	1133 aa	Known RBP	11.51	□□□□□ -0.57
SLC3A2-223	ENST00000546312	STK24	Q9Y6E0	443 aa		11.51	□□□□□ -0.57
SLC3A2-223	ENST00000546312	PTPRC	P08575	1304 aa		11.51	□□□□□ -0.57
SLC3A2-223	ENST00000546312	KDM3B	Q7LBC6	1761 aa		11.5	□□□□□ -0.57
SLC3A2-223	ENST00000546312	CHL1	O00533	1208 aa		11.5	□□□□□ -0.57
SLC3A2-223	ENST00000546312	STARD3NL	O95772	234 aa		11.5	□□□□□ -0.57
SLC3A2-223	ENST00000546312	MRPL50	Q8N5N7	158 aa	Known RBP	11.5	□□□□□ -0.57
SLC3A2-223	ENST00000546312	SPRYD3	Q8NCJ5	442 aa		11.5	□□□□□ -0.57
SLC3A2-223	ENST00000546312	FLAD1	Q8NFF5	587 aa		11.5	□□□□□ -0.57
SLC3A2-223	ENST00000546312	THUMPD2	Q9BTF0	503 aa	Known RBP	11.5	□□□□□ -0.57
SLC3A2-223	ENST00000546312	BCL2L13	Q9BXK5	485 aa		11.5	□□□□□ -0.57
SLC3A2-223	ENST00000546312	TSPYL4	Q9UJ04	414 aa		11.5	□□□□□ -0.57
SLC3A2-223	ENST00000546312	PCDHB8	Q9UN66	801 aa		11.5	□□□□□ -0.57
SLC3A2-223	ENST00000546312	LAS1L	Q9Y4W2	734 aa	Known RBP	11.5	□□□□□ -0.57
SLC3A2-223	ENST00000546312	PCDHB13	Q9Y5F0	798 aa		11.5	□□□□□ -0.57
SLC3A2-223	ENST00000546312	QSER1	Q2KHR3	1735 aa		11.49	□□□□□ -0.57
SLC3A2-223	ENST00000546312	SNRPA1	P09661	255 aa	Known RBP	11.49	□□□□□ -0.57
SLC3A2-223	ENST00000546312	KCNQ4	P56696	695 aa		11.49	□□□□□ -0.57
SLC3A2-223	ENST00000546312	ZNF496	Q96IT1	587 aa	Predicted RBP	11.49	□□□□□ -0.57
SLC3A2-223	ENST00000546312	MIS18A	Q9NYP9	233 aa		11.49	□□□□□ -0.57
SLC3A2-223	ENST00000546312	TFCP2L1	Q9NZI6	479 aa		11.49	□□□□□ -0.57
SLC3A2-223	ENST00000546312	ITPK1	Q13572	414 aa		11.48	□□□□□ -0.57
SLC3A2-223	ENST00000546312	TMEM57	Q8N5G2	664 aa		11.48	□□□□□ -0.57
SLC3A2-223	ENST00000546312	IL27	Q8NEV9	243 aa		11.48	□□□□□ -0.57
SLC3A2-223	ENST00000546312	AK7	Q96M32	723 aa		11.48	□□□□□ -0.57
SLC3A2-223	ENST00000546312	SLC4A9	Q96Q91	983 aa		11.48	□□□□□ -0.57
SLC3A2-223	ENST00000546312	MBIP	Q9NS73	344 aa		11.48	□□□□□ -0.57
SLC3A2-223	ENST00000546312	HEG1	Q9ULI3	1381 aa		11.48	□□□□□ -0.57
SLC3A2-223	ENST00000546312	CIC	Q96RK0	1608 aa	Predicted RBP	11.48	□□□□□ -0.57
SLC3A2-223	ENST00000546312	C4B	P0C0L5	1744 aa		11.48	□□□□□ -0.57
SLC3A2-223	ENST00000546312	COL5A3	P25940	1745 aa	Predicted RBP	11.48	□□□□□ -0.57
SLC3A2-223	ENST00000546312	KCP	Q6ZWJ8	1503 aa		11.47	□□□□□ -0.57
SLC3A2-223	ENST00000546312	ABCC4	O15439	1325 aa		11.47	□□□□□ -0.57
SLC3A2-223	ENST00000546312	ZBTB7B	O15156	539 aa	Predicted RBP	11.47	□□□□□ -0.57
SLC3A2-223	ENST00000546312	KCNQ3	O43525	872 aa		11.47	□□□□□ -0.57
SLC3A2-223	ENST00000546312	EIF4A1	P60842	406 aa	Known RBP	11.47	□□□□□ -0.57
SLC3A2-223	ENST00000546312	NUCB1	Q02818	461 aa		11.47	□□□□□ -0.57
SLC3A2-223	ENST00000546312	R3HDM1	Q15032	1099 aa	Known RBP	11.47	□□□□□ -0.57
SLC3A2-223	ENST00000546312	RPAP2	Q8IXW5	612 aa	Predicted RBP	11.47	□□□□□ -0.57
SLC3A2-223	ENST00000546312	TJP1	Q07157	1748 aa		11.46	□□□□□ -0.57
SLC3A2-223	ENST00000546312	CNTNAP4	Q9C0A0	1308 aa		11.46	□□□□□ -0.57
SLC3A2-223	ENST00000546312	RPS6KA4	O75676	772 aa		11.46	□□□□□ -0.57
SLC3A2-223	ENST00000546312	CYP19A1	P11511	503 aa	Predicted RBP	11.46	□□□□□ -0.57
SLC3A2-223	ENST00000546312	PDAP1	Q13442	181 aa	Known RBP	11.46	□□□□□ -0.57
SLC3A2-223	ENST00000546312	INTS3	Q68E01	1043 aa	Known RBP	11.46	□□□□□ -0.57
SLC3A2-223	ENST00000546312	DNAJC10	Q8IXB1	793 aa		11.46	□□□□□ -0.57
SLC3A2-223	ENST00000546312	LINC00116	Q8NCU8	138 aa		11.46	□□□□□ -0.57
SLC3A2-223	ENST00000546312	SLC16A10	Q8TF71	515 aa		11.46	□□□□□ -0.57
SLC3A2-223	ENST00000546312	RTCB	Q9Y3I0	505 aa	Known RBP	11.46	□□□□□ -0.57
SLC3A2-223	ENST00000546312	MYH14	Q7Z406	1995 aa	Known RBP	11.46	□□□□□ -0.58
SLC3A2-223	ENST00000546312	UBR3	Q6ZT12	1888 aa		11.45	□□□□□ -0.58
SLC3A2-223	ENST00000546312	HMMR	O75330	724 aa		11.45	□□□□□ -0.58
SLC3A2-223	ENST00000546312	GIGYF1	O75420	1035 aa	Predicted RBP	11.45	□□□□□ -0.58
SLC3A2-223	ENST00000546312	SSFA2	P28290	1259 aa		11.45	□□□□□ -0.58
SLC3A2-223	ENST00000546312	CRKL	P46109	303 aa	Known RBP	11.45	□□□□□ -0.58
SLC3A2-223	ENST00000546312	TRAPPC3L	Q5T215	181 aa		11.45	□□□□□ -0.58
SLC3A2-223	ENST00000546312	CHD1L	Q86WJ1	897 aa		11.45	□□□□□ -0.58
SLC3A2-223	ENST00000546312	ZNF579	Q8NAF0	562 aa	Known RBP	11.45	□□□□□ -0.58
SLC3A2-223	ENST00000546312	CCDC87	Q9NVE4	849 aa		11.45	□□□□□ -0.58
SLC3A2-223	ENST00000546312	PSD	A5PKW4	1024 aa	Predicted RBP	11.44	□□□□□ -0.58
SLC3A2-223	ENST00000546312	GNPAT	O15228	680 aa		11.44	□□□□□ -0.58
SLC3A2-223	ENST00000546312	MAP3K13	O43283	966 aa		11.44	□□□□□ -0.58

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