RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 TUBGCP6Q96RT7 1819 aa22.43■■□□□ 1.18
CD9-211ENST00000546073 NFIXQ14938 502 aa22.43■■□□□ 1.18
CD9-211ENST00000546073 XAGE3Q8WTP9 111 aa22.43■■□□□ 1.18
CD9-211ENST00000546073 ZBTB3Q9H5J0 574 aa22.43■■□□□ 1.18
CD9-211ENST00000546073 ZNF521Q96K83 1311 aa22.42■■□□□ 1.18
CD9-211ENST00000546073 SERPINB2P05120 415 aa22.42■■□□□ 1.18
CD9-211ENST00000546073 TM4SF1P30408 202 aa22.42■■□□□ 1.18
CD9-211ENST00000546073 NIP7Q9Y221 180 aaKnown RBP eCLIP22.42■■□□□ 1.18
CD9-211ENST00000546073 LAMB4A4D0S4 1761 aa22.41■■□□□ 1.18
CD9-211ENST00000546073 ANXA1P04083 346 aa22.41■■□□□ 1.18
CD9-211ENST00000546073 ST5P78524 1137 aa22.41■■□□□ 1.18
CD9-211ENST00000546073 PDIA6Q15084 440 aa22.41■■□□□ 1.18
CD9-211ENST00000546073 TBC1D9BQ66K14 1250 aa22.41■■□□□ 1.18
CD9-211ENST00000546073 TPTE2Q6XPS3 522 aa22.41■■□□□ 1.18
CD9-211ENST00000546073 ANKRD13DQ6ZTN6 518 aa22.41■■□□□ 1.18
CD9-211ENST00000546073 RIC3Q7Z5B4 369 aa22.41■■□□□ 1.18
CD9-211ENST00000546073 NBPF5PQ86XG9 351 aaPredicted RBP22.41■■□□□ 1.18
CD9-211ENST00000546073 TSPYL6Q8N831 410 aa22.41■■□□□ 1.18
CD9-211ENST00000546073 SYT17Q9BSW7 474 aa22.41■■□□□ 1.18
CD9-211ENST00000546073 CARMIL3Q8ND23 1372 aa22.4■■□□□ 1.18
CD9-211ENST00000546073 SLFN5Q08AF3 891 aa22.4■■□□□ 1.18
CD9-211ENST00000546073 TTLL7Q6ZT98 887 aa22.4■■□□□ 1.18
CD9-211ENST00000546073 NYXQ9GZU5 481 aa22.4■■□□□ 1.18
CD9-211ENST00000546073 SLC4A2P04920 1241 aa22.39■■□□□ 1.17
CD9-211ENST00000546073 GIGYF2Q6Y7W6 1299 aaKnown RBP22.39■■□□□ 1.17
CD9-211ENST00000546073 PLBD2Q8NHP8 589 aa22.39■■□□□ 1.17
CD9-211ENST00000546073 BCL2L12Q9HB09 334 aa22.39■■□□□ 1.17
CD9-211ENST00000546073 POLRMTO00411 1230 aaKnown RBP22.38■■□□□ 1.17
CD9-211ENST00000546073 PROSER3Q2NL68 480 aa22.38■■□□□ 1.17
CD9-211ENST00000546073 PPP1R42Q7Z4L9 355 aa22.38■■□□□ 1.17
CD9-211ENST00000546073 CNBD1Q8NA66 436 aa22.38■■□□□ 1.17
CD9-211ENST00000546073 ZNF428Q96B54 188 aa22.38■■□□□ 1.17
CD9-211ENST00000546073 VAMP4O75379 141 aa22.37■■□□□ 1.17
CD9-211ENST00000546073 TGFB2P61812 414 aa22.37■■□□□ 1.17
CD9-211ENST00000546073 PARP10Q53GL7 1025 aa22.37■■□□□ 1.17
CD9-211ENST00000546073 SPINK5Q9NQ38 1064 aaPredicted RBP22.37■■□□□ 1.17
CD9-211ENST00000546073 PDZRN3Q9UPQ7 1066 aa22.37■■□□□ 1.17
CD9-211ENST00000546073 CT47B1P0C2W7 299 aaPredicted RBP22.36■■□□□ 1.17
CD9-211ENST00000546073 NEXNQ0ZGT2 675 aa22.36■■□□□ 1.17
CD9-211ENST00000546073 HLFQ16534 295 aa22.36■■□□□ 1.17
CD9-211ENST00000546073 PELP1Q8IZL8 1130 aaKnown RBP22.36■■□□□ 1.17
CD9-211ENST00000546073 FAM177BA6PVY3 158 aa22.35■■□□□ 1.17
CD9-211ENST00000546073 DDR1Q08345 913 aa22.35■■□□□ 1.17
CD9-211ENST00000546073 TCERG1O14776 1098 aaKnown RBP22.34■■□□□ 1.17
CD9-211ENST00000546073 PDE6BP35913 854 aa22.34■■□□□ 1.17
CD9-211ENST00000546073 GPR162Q16538 588 aa22.34■■□□□ 1.17
CD9-211ENST00000546073 C4AP0C0L4 1744 aa22.34■■□□□ 1.17
CD9-211ENST00000546073 GPTP24298 496 aa22.33■■□□□ 1.17
CD9-211ENST00000546073 TCIRG1Q13488 830 aa22.33■■□□□ 1.17
CD9-211ENST00000546073 CDCA7LQ96GN5 454 aa22.33■■□□□ 1.17
CD9-211ENST00000546073 H0YIN7 160 aa22.32■■□□□ 1.16
CD9-211ENST00000546073 HSP90B1P14625 803 aaKnown RBP22.32■■□□□ 1.16
CD9-211ENST00000546073 FKBP5Q13451 457 aaPredicted RBP22.32■■□□□ 1.16
CD9-211ENST00000546073 PHAXQ9H814 394 aaKnown RBP22.32■■□□□ 1.16
CD9-211ENST00000546073 ZBED9Q6R2W3 1325 aa22.31■■□□□ 1.16
CD9-211ENST00000546073 LRP10Q7Z4F1 713 aa22.31■■□□□ 1.16
CD9-211ENST00000546073 UTP14AQ9BVJ6 771 aaKnown RBP22.31■■□□□ 1.16
CD9-211ENST00000546073 BRIP1Q9BX63 1249 aa22.31■■□□□ 1.16
CD9-211ENST00000546073 KSR2Q6VAB6 950 aa22.3■■□□□ 1.16
CD9-211ENST00000546073 FLIIQ13045 1269 aa22.29■■□□□ 1.16
CD9-211ENST00000546073 ZNF34Q8IZ26 560 aa22.29■■□□□ 1.16
CD9-211ENST00000546073 ATP10DQ9P241 1426 aa22.29■■□□□ 1.16
CD9-211ENST00000546073 PRR5LQ6MZQ0 368 aa22.28■■□□□ 1.16
CD9-211ENST00000546073 PIM2Q9P1W9 311 aa22.28■■□□□ 1.16
CD9-211ENST00000546073 TRMT112Q9UI30 125 aaKnown RBP22.28■■□□□ 1.16
CD9-211ENST00000546073 RNF123Q5XPI4 1314 aa22.28■■□□□ 1.16
CD9-211ENST00000546073 ALDH1L2Q3SY69 923 aa22.27■■□□□ 1.16
CD9-211ENST00000546073 NLGN2Q8NFZ4 835 aa22.27■■□□□ 1.16
CD9-211ENST00000546073 MYD88Q99836 296 aa22.27■■□□□ 1.16
CD9-211ENST00000546073 MAP3K2Q9Y2U5 619 aa22.27■■□□□ 1.16
CD9-211ENST00000546073 SCN7AQ01118 1682 aa22.26■■□□□ 1.15
CD9-211ENST00000546073 A0A0G2JLW4 131 aa22.26■■□□□ 1.15
CD9-211ENST00000546073 PI4KAP2A4QPH2 592 aa22.26■■□□□ 1.15
CD9-211ENST00000546073 GRIN3BO60391 1043 aa22.26■■□□□ 1.15
CD9-211ENST00000546073 C2CD5Q86YS7 1000 aa22.26■■□□□ 1.15
CD9-211ENST00000546073 TRMT2AQ8IZ69 625 aaKnown RBP22.26■■□□□ 1.15
CD9-211ENST00000546073 PI4KAP1Q8N8J0 262 aa22.26■■□□□ 1.15
CD9-211ENST00000546073 SMC4Q9NTJ3 1288 aa22.26■■□□□ 1.15
CD9-211ENST00000546073 COL24A1Q17RW2 1714 aa22.26■■□□□ 1.15
CD9-211ENST00000546073 C10orf71Q711Q0 1435 aa22.25■■□□□ 1.15
CD9-211ENST00000546073 SUSD4Q5VX71 490 aa22.25■■□□□ 1.15
CD9-211ENST00000546073 METTL22Q9BUU2 404 aaPredicted RBP22.25■■□□□ 1.15
CD9-211ENST00000546073 ATP5J2-PTCD1G3V325 749 aa22.24■■□□□ 1.15
CD9-211ENST00000546073 DPEP1P16444 411 aa22.24■■□□□ 1.15
CD9-211ENST00000546073 NLRP10Q86W26 655 aa22.24■■□□□ 1.15
CD9-211ENST00000546073 ZNF622Q969S3 477 aaKnown RBP eCLIP22.24■■□□□ 1.15
CD9-211ENST00000546073 NLRP3Q96P20 1036 aa22.24■■□□□ 1.15
CD9-211ENST00000546073 IBTKQ9P2D0 1353 aaPredicted RBP22.24■■□□□ 1.15
CD9-211ENST00000546073 TRIM28Q13263 835 aaKnown RBP22.23■■□□□ 1.15
CD9-211ENST00000546073 DALRD3Q5D0E6 543 aaKnown RBP22.23■■□□□ 1.15
CD9-211ENST00000546073 CCDC24Q8N4L8 307 aa22.23■■□□□ 1.15
CD9-211ENST00000546073 CCDC191Q8NCU4 936 aa22.23■■□□□ 1.15
CD9-211ENST00000546073 TMX4Q9H1E5 349 aaPredicted RBP22.23■■□□□ 1.15
CD9-211ENST00000546073 CWC25Q9NXE8 425 aaPredicted RBP22.23■■□□□ 1.15
CD9-211ENST00000546073 SH3TC1Q8TE82 1336 aa22.23■■□□□ 1.15
CD9-211ENST00000546073 DNAAF4Q8WXU2 420 aa22.22■■□□□ 1.15
CD9-211ENST00000546073 RPGRQ92834 1020 aaKnown RBP22.22■■□□□ 1.15
CD9-211ENST00000546073 BCS1LQ9Y276 419 aa22.22■■□□□ 1.15
CD9-211ENST00000546073 PTPRCP08575 1304 aa22.22■■□□□ 1.15
CD9-211ENST00000546073 NUTM1Q86Y26 1132 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms