RNA–Protein interactions for RNA: ENST00000545807.6

NECAP1-208, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-208ENST00000545807 IGHDP01880 384 aa8.05□□□□□ -1.12
NECAP1-208ENST00000545807 TMEM57Q8N5G2 664 aa8.05□□□□□ -1.12
NECAP1-208ENST00000545807 IGSF1Q8N6C5 1336 aa8.04□□□□□ -1.12
NECAP1-208ENST00000545807 MST1RQ04912 1400 aa8.04□□□□□ -1.12
NECAP1-208ENST00000545807 STRCP1A6NGW2 1772 aa8.04□□□□□ -1.12
NECAP1-208ENST00000545807 GNAT3A8MTJ3 354 aa8.04□□□□□ -1.12
NECAP1-208ENST00000545807 SSR1P43307 286 aaKnown RBP8.04□□□□□ -1.12
NECAP1-208ENST00000545807 SLC4A10Q6U841 1118 aa8.04□□□□□ -1.12
NECAP1-208ENST00000545807 MNS1Q8NEH6 495 aa8.04□□□□□ -1.12
NECAP1-208ENST00000545807 IL17REQ8NFR9 667 aa8.04□□□□□ -1.12
NECAP1-208ENST00000545807 CTNNA3Q9UI47 895 aa8.04□□□□□ -1.12
NECAP1-208ENST00000545807 KCNQ3O43525 872 aa8.04□□□□□ -1.12
NECAP1-208ENST00000545807 ANXA1P04083 346 aa8.04□□□□□ -1.12
NECAP1-208ENST00000545807 ZNF853P0CG23 659 aa8.04□□□□□ -1.12
NECAP1-208ENST00000545807 ZNF445P59923 1031 aa8.04□□□□□ -1.12
NECAP1-208ENST00000545807 GAS2L2Q8NHY3 880 aa8.04□□□□□ -1.12
NECAP1-208ENST00000545807 IFT57Q9NWB7 429 aa8.04□□□□□ -1.12
NECAP1-208ENST00000545807 GSCP56915 257 aaPredicted RBP8.03□□□□□ -1.12
NECAP1-208ENST00000545807 KIAA2012Q0VF49 1180 aa8.03□□□□□ -1.12
NECAP1-208ENST00000545807 SYCP1Q15431 976 aa8.03□□□□□ -1.12
NECAP1-208ENST00000545807 C11orf91Q3C1V1 193 aa8.03□□□□□ -1.12
NECAP1-208ENST00000545807 PCDHB15Q9Y5E8 787 aa8.03□□□□□ -1.12
NECAP1-208ENST00000545807 NUTM2BA6NNL0 878 aaPredicted RBP8.03□□□□□ -1.12
NECAP1-208ENST00000545807 NUTM2EB1AL46 878 aaPredicted RBP8.03□□□□□ -1.12
NECAP1-208ENST00000545807 TSGA10IPQ3SY00 556 aa8.03□□□□□ -1.12
NECAP1-208ENST00000545807 ATF7IPQ6VMQ6 1270 aa8.03□□□□□ -1.12
NECAP1-208ENST00000545807 NUTM2AQ8IVF1 878 aaPredicted RBP8.03□□□□□ -1.12
NECAP1-208ENST00000545807 TBC1D32Q96NH3 1257 aa8.03□□□□□ -1.12
NECAP1-208ENST00000545807 FAM53CQ9NYF3 392 aa8.03□□□□□ -1.12
NECAP1-208ENST00000545807 NRKQ7Z2Y5 1582 aa8.03□□□□□ -1.12
NECAP1-208ENST00000545807 KIAA0232Q92628 1395 aa8.03□□□□□ -1.12
NECAP1-208ENST00000545807 F6X3S4 739 aa8.03□□□□□ -1.12
NECAP1-208ENST00000545807 ADAMTS2O95450 1211 aa8.03□□□□□ -1.12
NECAP1-208ENST00000545807 SLC4A2P04920 1241 aa8.03□□□□□ -1.12
NECAP1-208ENST00000545807 RAPGEF4Q8WZA2 1011 aa8.03□□□□□ -1.12
NECAP1-208ENST00000545807 APBB1O00213 710 aa8.02□□□□□ -1.13
NECAP1-208ENST00000545807 TEFQ10587 303 aa8.02□□□□□ -1.13
NECAP1-208ENST00000545807 MUM1L1Q5H9M0 696 aa8.02□□□□□ -1.13
NECAP1-208ENST00000545807 C1orf141Q5JVX7 400 aa8.02□□□□□ -1.13
NECAP1-208ENST00000545807 SWT1Q5T5J6 900 aaKnown RBP8.02□□□□□ -1.13
NECAP1-208ENST00000545807 TOM1L2Q6ZVM7 507 aa8.02□□□□□ -1.13
NECAP1-208ENST00000545807 ITFG2Q969R8 447 aa8.02□□□□□ -1.13
NECAP1-208ENST00000545807 KLHL33A6NCF5 533 aa8.02□□□□□ -1.13
NECAP1-208ENST00000545807 CASQ1P31415 396 aa8.02□□□□□ -1.13
NECAP1-208ENST00000545807 CYP2C19P33261 490 aa8.02□□□□□ -1.13
NECAP1-208ENST00000545807 TDO2P48775 406 aa8.02□□□□□ -1.13
NECAP1-208ENST00000545807 HNRNPH2P55795 449 aaKnown RBP8.02□□□□□ -1.13
NECAP1-208ENST00000545807 EVA1CP58658 441 aa8.02□□□□□ -1.13
NECAP1-208ENST00000545807 PDE3AQ14432 1141 aa8.02□□□□□ -1.13
NECAP1-208ENST00000545807 G2E3Q7L622 706 aa8.02□□□□□ -1.13
NECAP1-208ENST00000545807 IL16Q14005 1332 aa8.02□□□□□ -1.13
NECAP1-208ENST00000545807 PPP1R12AO14974 1030 aaPredicted RBP8.01□□□□□ -1.13
NECAP1-208ENST00000545807 SLC39A6Q13433 755 aa8.01□□□□□ -1.13
NECAP1-208ENST00000545807 CXorf56Q9H5V9 222 aa8.01□□□□□ -1.13
NECAP1-208ENST00000545807 SUFUQ9UMX1 484 aa8.01□□□□□ -1.13
NECAP1-208ENST00000545807 ARHGEF10O15013 1369 aa8.01□□□□□ -1.13
NECAP1-208ENST00000545807 CHL1O00533 1208 aa8.01□□□□□ -1.13
NECAP1-208ENST00000545807 REC8O95072 547 aa8.01□□□□□ -1.13
NECAP1-208ENST00000545807 DNAJC21Q5F1R6 531 aaKnown RBP8.01□□□□□ -1.13
NECAP1-208ENST00000545807 DDX54Q8TDD1 881 aaKnown RBP8.01□□□□□ -1.13
NECAP1-208ENST00000545807 SPATA31A3Q5VYP0 1347 aa8.01□□□□□ -1.13
NECAP1-208ENST00000545807 IPO8O15397 1037 aaKnown RBP8□□□□□ -1.13
NECAP1-208ENST00000545807 SEC24BO95487 1268 aa8□□□□□ -1.13
NECAP1-208ENST00000545807 PIP4K2AP48426 406 aaPredicted RBP8□□□□□ -1.13
NECAP1-208ENST00000545807 MVPQ14764 893 aaKnown RBP8□□□□□ -1.13
NECAP1-208ENST00000545807 PLEKHO1Q53GL0 409 aaPredicted RBP8□□□□□ -1.13
NECAP1-208ENST00000545807 MRPL50Q8N5N7 158 aaKnown RBP8□□□□□ -1.13
NECAP1-208ENST00000545807 PIBF1Q8WXW3 757 aa8□□□□□ -1.13
NECAP1-208ENST00000545807 SPTLC3Q9NUV7 552 aa8□□□□□ -1.13
NECAP1-208ENST00000545807 DLG5Q8TDM6 1919 aa8□□□□□ -1.13
NECAP1-208ENST00000545807 KIF3CO14782 793 aa8□□□□□ -1.13
NECAP1-208ENST00000545807 FKBP5Q13451 457 aaPredicted RBP8□□□□□ -1.13
NECAP1-208ENST00000545807 JMYQ8N9B5 988 aa8□□□□□ -1.13
NECAP1-208ENST00000545807 PRAMEF22A3QJZ6 481 aa8□□□□□ -1.13
NECAP1-208ENST00000545807 CASC1Q6TDU7 716 aa8□□□□□ -1.13
NECAP1-208ENST00000545807 ATG3Q9NT62 314 aa8□□□□□ -1.13
NECAP1-208ENST00000545807 CIZ1Q9ULV3 898 aaPredicted RBP8□□□□□ -1.13
NECAP1-208ENST00000545807 STRCQ7RTU9 1775 aa7.99□□□□□ -1.13
NECAP1-208ENST00000545807 ERBB3P21860 1342 aa7.99□□□□□ -1.13
NECAP1-208ENST00000545807 KRT222Q8N1A0 295 aa7.99□□□□□ -1.13
NECAP1-208ENST00000545807 NFATC2IPQ8NCF5 419 aa7.99□□□□□ -1.13
NECAP1-208ENST00000545807 CALR3Q96L12 384 aaKnown RBP7.99□□□□□ -1.13
NECAP1-208ENST00000545807 GBP4Q96PP9 640 aa7.99□□□□□ -1.13
NECAP1-208ENST00000545807 BTBD11A6QL63 1104 aa7.99□□□□□ -1.13
NECAP1-208ENST00000545807 TAF7Q15545 349 aaPredicted RBP7.99□□□□□ -1.13
NECAP1-208ENST00000545807 KLHL40Q2TBA0 621 aa7.99□□□□□ -1.13
NECAP1-208ENST00000545807 ZC3H12AQ5D1E8 599 aaKnown RBP7.99□□□□□ -1.13
NECAP1-208ENST00000545807 MAP3K5Q99683 1374 aa7.99□□□□□ -1.13
NECAP1-208ENST00000545807 TATP17735 454 aaPredicted RBP7.98□□□□□ -1.13
NECAP1-208ENST00000545807 CLEC17AQ6ZS10 378 aa7.98□□□□□ -1.13
NECAP1-208ENST00000545807 JRKLQ9Y4A0 524 aa7.98□□□□□ -1.13
NECAP1-208ENST00000545807 ERICH4A6NGS2 130 aa7.98□□□□□ -1.13
NECAP1-208ENST00000545807 ARID4AP29374 1257 aaPredicted RBP7.98□□□□□ -1.13
NECAP1-208ENST00000545807 MTA1Q13330 715 aa7.98□□□□□ -1.13
NECAP1-208ENST00000545807 LARP1Q6PKG0 1096 aaKnown RBP7.98□□□□□ -1.13
NECAP1-208ENST00000545807 TRERF1Q96PN7 1200 aa7.98□□□□□ -1.13
NECAP1-208ENST00000545807 STK31Q9BXU1 1019 aa7.98□□□□□ -1.13
NECAP1-208ENST00000545807 TMX1Q9H3N1 280 aa7.98□□□□□ -1.13
NECAP1-208ENST00000545807 ZNF446Q9NWS9 450 aa7.98□□□□□ -1.13
NECAP1-208ENST00000545807 LTN1O94822 1766 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms