RNA–Protein interactions for RNA: ENST00000545549.1

LINC01965-204, Transcript of long intergenic non-protein coding RNA 1965, humanhuman

TSL 4 BASIC

Gene LINC01965, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01965-204ENST00000545549 ROCK2O75116 1388 aaKnown RBP4.9□□□□□ -1.63
LINC01965-204ENST00000545549 CPDO75976 1380 aa4.9□□□□□ -1.63
LINC01965-204ENST00000545549 USP31Q70CQ4 1352 aa4.9□□□□□ -1.63
LINC01965-204ENST00000545549 USP6P35125 1406 aa4.89□□□□□ -1.63
LINC01965-204ENST00000545549 ITSN1Q15811 1721 aa4.89□□□□□ -1.63
LINC01965-204ENST00000545549 SLIT3O75094 1523 aa4.89□□□□□ -1.63
LINC01965-204ENST00000545549 VIRMAQ69YN4 1812 aaKnown RBP4.89□□□□□ -1.63
LINC01965-204ENST00000545549 DDX10Q13206 875 aaKnown RBP4.89□□□□□ -1.63
LINC01965-204ENST00000545549 SAFB2Q14151 953 aaKnown RBP eCLIP4.89□□□□□ -1.63
LINC01965-204ENST00000545549 KRI1Q8N9T8 703 aaKnown RBP4.89□□□□□ -1.63
LINC01965-204ENST00000545549 BEGAINQ9BUH8 593 aa4.89□□□□□ -1.63
LINC01965-204ENST00000545549 ACEP12821 1306 aa4.89□□□□□ -1.63
LINC01965-204ENST00000545549 IGSF1Q8N6C5 1336 aa4.89□□□□□ -1.63
LINC01965-204ENST00000545549 PEAK1Q9H792 1746 aa4.89□□□□□ -1.63
LINC01965-204ENST00000545549 COL18A1P39060 1754 aa4.88□□□□□ -1.63
LINC01965-204ENST00000545549 PHRF1Q9P1Y6 1649 aaKnown RBP4.88□□□□□ -1.63
LINC01965-204ENST00000545549 ST20-MTHFSA0A0A6YYL1 179 aa4.88□□□□□ -1.63
LINC01965-204ENST00000545549 NBPF26B4DH59 902 aa4.88□□□□□ -1.63
LINC01965-204ENST00000545549 IRF6O14896 467 aa4.88□□□□□ -1.63
LINC01965-204ENST00000545549 MAP2K5Q13163 448 aa4.88□□□□□ -1.63
LINC01965-204ENST00000545549 ZNF827Q17R98 1081 aa4.88□□□□□ -1.63
LINC01965-204ENST00000545549 MRPL50Q8N5N7 158 aaKnown RBP4.88□□□□□ -1.63
LINC01965-204ENST00000545549 CCDC102AQ96A19 550 aa4.88□□□□□ -1.63
LINC01965-204ENST00000545549 PHOX2BQ99453 314 aa4.88□□□□□ -1.63
LINC01965-204ENST00000545549 EYA1Q99502 592 aa4.88□□□□□ -1.63
LINC01965-204ENST00000545549 NBPF3Q9H094 633 aa4.88□□□□□ -1.63
LINC01965-204ENST00000545549 SLC24A3Q9HC58 644 aa4.88□□□□□ -1.63
LINC01965-204ENST00000545549 CABP1Q9NZU7 370 aa4.88□□□□□ -1.63
LINC01965-204ENST00000545549 LMO7Q8WWI1 1683 aa4.88□□□□□ -1.63
LINC01965-204ENST00000545549 PKD1L2Q7Z442 2459 aa4.88□□□□□ -1.63
LINC01965-204ENST00000545549 MON2Q7Z3U7 1717 aa4.88□□□□□ -1.63
LINC01965-204ENST00000545549 AKAP12Q02952 1782 aa4.88□□□□□ -1.63
LINC01965-204ENST00000545549 PPIP5K1Q6PFW1 1433 aa4.88□□□□□ -1.63
LINC01965-204ENST00000545549 NFAT5O94916 1531 aa4.87□□□□□ -1.63
LINC01965-204ENST00000545549 PIK3C2AO00443 1686 aa4.87□□□□□ -1.63
LINC01965-204ENST00000545549 EIF4G2P78344 907 aaKnown RBP eCLIP4.87□□□□□ -1.63
LINC01965-204ENST00000545549 PTF1AQ7RTS3 328 aa4.87□□□□□ -1.63
LINC01965-204ENST00000545549 METTL3Q86U44 580 aaKnown RBP4.87□□□□□ -1.63
LINC01965-204ENST00000545549 CARD11Q9BXL7 1154 aa4.87□□□□□ -1.63
LINC01965-204ENST00000545549 RAPGEFL1Q9UHV5 662 aa4.87□□□□□ -1.63
LINC01965-204ENST00000545549 PNPLA7Q6ZV29 1317 aa4.87□□□□□ -1.63
LINC01965-204ENST00000545549 EVC2Q86UK5 1308 aa4.87□□□□□ -1.63
LINC01965-204ENST00000545549 USP47Q96K76 1375 aa4.87□□□□□ -1.63
LINC01965-204ENST00000545549 SZT2Q5T011 3432 aa4.87□□□□□ -1.63
LINC01965-204ENST00000545549 QSER1Q2KHR3 1735 aa4.86□□□□□ -1.63
LINC01965-204ENST00000545549 RCCD1A6NED2 376 aa4.86□□□□□ -1.63
LINC01965-204ENST00000545549 GOLGA8CPA6NN73 597 aa4.86□□□□□ -1.63
LINC01965-204ENST00000545549 VEGFAP15692 232 aaPredicted RBP4.86□□□□□ -1.63
LINC01965-204ENST00000545549 PSME1Q06323 249 aa4.86□□□□□ -1.63
LINC01965-204ENST00000545549 C9orf131Q5VYM1 1079 aa4.86□□□□□ -1.63
LINC01965-204ENST00000545549 PXYLP1Q8TE99 480 aa4.86□□□□□ -1.63
LINC01965-204ENST00000545549 KCTD12Q96CX2 325 aaKnown RBP4.86□□□□□ -1.63
LINC01965-204ENST00000545549 ZFRQ96KR1 1074 aaKnown RBP4.86□□□□□ -1.63
LINC01965-204ENST00000545549 SLC12A5Q9H2X9 1139 aa4.86□□□□□ -1.63
LINC01965-204ENST00000545549 TTC21BQ7Z4L5 1316 aa4.86□□□□□ -1.63
LINC01965-204ENST00000545549 SYNGAP1Q96PV0 1343 aa4.86□□□□□ -1.63
LINC01965-204ENST00000545549 ABCC6O95255 1503 aa4.86□□□□□ -1.63
LINC01965-204ENST00000545549 OATP04181 439 aa4.85□□□□□ -1.63
LINC01965-204ENST00000545549 SAMD7Q7Z3H4 446 aa4.85□□□□□ -1.63
LINC01965-204ENST00000545549 LAPTM4BQ86VI4 370 aa4.85□□□□□ -1.63
LINC01965-204ENST00000545549 ARHGEF25Q86VW2 580 aa4.85□□□□□ -1.63
LINC01965-204ENST00000545549 WNT2BQ93097 391 aa4.85□□□□□ -1.63
LINC01965-204ENST00000545549 CARD14Q9BXL6 1004 aa4.85□□□□□ -1.63
LINC01965-204ENST00000545549 USP35Q9P2H5 1018 aa4.85□□□□□ -1.63
LINC01965-204ENST00000545549 TTC21AQ8NDW8 1320 aa4.85□□□□□ -1.63
LINC01965-204ENST00000545549 A0A1W2PP64 1363 aa4.85□□□□□ -1.63
LINC01965-204ENST00000545549 BCL9O00512 1426 aa4.85□□□□□ -1.63
LINC01965-204ENST00000545549 EDC4Q6P2E9 1401 aaKnown RBP4.85□□□□□ -1.63
LINC01965-204ENST00000545549 PKD1L3Q7Z443 1732 aa4.85□□□□□ -1.63
LINC01965-204ENST00000545549 SBF2Q86WG5 1849 aa4.85□□□□□ -1.63
LINC01965-204ENST00000545549 COL6A3P12111 3177 aa4.85□□□□□ -1.63
LINC01965-204ENST00000545549 LTBP1Q14766 1721 aa4.84□□□□□ -1.63
LINC01965-204ENST00000545549 PARP4Q9UKK3 1724 aaKnown RBP4.84□□□□□ -1.63
LINC01965-204ENST00000545549 THSD7BQ9C0I4 1608 aa4.84□□□□□ -1.63
LINC01965-204ENST00000545549 KIAA0232Q92628 1395 aa4.84□□□□□ -1.63
LINC01965-204ENST00000545549 WDR33Q9C0J8 1336 aaKnown RBP4.84□□□□□ -1.63
LINC01965-204ENST00000545549 GCP02774 474 aa4.84□□□□□ -1.63
LINC01965-204ENST00000545549 BCAMP50895 628 aa4.84□□□□□ -1.63
LINC01965-204ENST00000545549 MMRN1Q13201 1228 aa4.84□□□□□ -1.63
LINC01965-204ENST00000545549 SWT1Q5T5J6 900 aaKnown RBP4.84□□□□□ -1.63
LINC01965-204ENST00000545549 NGDNQ8NEJ9 315 aaKnown RBP4.84□□□□□ -1.63
LINC01965-204ENST00000545549 SUPT16HQ9Y5B9 1047 aaKnown RBP4.84□□□□□ -1.63
LINC01965-204ENST00000545549 NCAPD2Q15021 1401 aa4.83□□□□□ -1.64
LINC01965-204ENST00000545549 ANKRD36BQ8N2N9 1353 aa4.83□□□□□ -1.64
LINC01965-204ENST00000545549 RASSF10A6NK89 507 aa4.83□□□□□ -1.64
LINC01965-204ENST00000545549 TMEM88BA6NKF7 163 aa4.83□□□□□ -1.64
LINC01965-204ENST00000545549 TRIM66O15016 1216 aa4.83□□□□□ -1.64
LINC01965-204ENST00000545549 CA12O43570 354 aa4.83□□□□□ -1.64
LINC01965-204ENST00000545549 DNAJB2P25686 324 aa4.83□□□□□ -1.64
LINC01965-204ENST00000545549 SRPK2P78362 688 aaKnown RBP4.83□□□□□ -1.64
LINC01965-204ENST00000545549 MDM2Q00987 491 aaPredicted RBP4.83□□□□□ -1.64
LINC01965-204ENST00000545549 ARHGAP27Q6ZUM4 889 aa4.83□□□□□ -1.64
LINC01965-204ENST00000545549 TCP11L2Q8N4U5 519 aa4.83□□□□□ -1.64
LINC01965-204ENST00000545549 ANKK1Q8NFD2 765 aa4.83□□□□□ -1.64
LINC01965-204ENST00000545549 RNF166Q96A37 237 aaPredicted RBP4.83□□□□□ -1.64
LINC01965-204ENST00000545549 STRN4Q9NRL3 753 aa4.83□□□□□ -1.64
LINC01965-204ENST00000545549 THRAP3Q9Y2W1 955 aaKnown RBP4.83□□□□□ -1.64
LINC01965-204ENST00000545549 COL5A2P05997 1499 aaPredicted RBP4.82□□□□□ -1.64
LINC01965-204ENST00000545549 KTN1Q86UP2 1357 aaKnown RBP4.82□□□□□ -1.64
LINC01965-204ENST00000545549 ERBB4Q15303 1308 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms