RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 EML3Q32P44 896 aa7.17□□□□□ -1.26
SNHG1-222ENST00000545308 XP32Q5T750 250 aa7.17□□□□□ -1.26
SNHG1-222ENST00000545308 SAMD5Q5TGI4 173 aa7.17□□□□□ -1.26
SNHG1-222ENST00000545308 GJA3Q9Y6H8 435 aa7.17□□□□□ -1.26
SNHG1-222ENST00000545308 LZTS3O60299 673 aaPredicted RBP7.16□□□□□ -1.26
SNHG1-222ENST00000545308 FURINP09958 794 aa7.16□□□□□ -1.26
SNHG1-222ENST00000545308 ZNF468Q5VIY5 522 aaPredicted RBP7.16□□□□□ -1.26
SNHG1-222ENST00000545308 CD163Q86VB7 1156 aa7.16□□□□□ -1.26
SNHG1-222ENST00000545308 NOD1Q9Y239 953 aa7.16□□□□□ -1.26
SNHG1-222ENST00000545308 PARP3Q9Y6F1 533 aa7.16□□□□□ -1.26
SNHG1-222ENST00000545308 CARNS1A5YM72 827 aa7.15□□□□□ -1.26
SNHG1-222ENST00000545308 EFSO43281 561 aa7.15□□□□□ -1.26
SNHG1-222ENST00000545308 SKIP12755 728 aa7.15□□□□□ -1.26
SNHG1-222ENST00000545308 GTF2IP78347 998 aa7.15□□□□□ -1.26
SNHG1-222ENST00000545308 LAMC2Q13753 1193 aa7.15□□□□□ -1.26
SNHG1-222ENST00000545308 BICDL1Q6ZP65 573 aa7.15□□□□□ -1.26
SNHG1-222ENST00000545308 NFATC2IPQ8NCF5 419 aa7.15□□□□□ -1.26
SNHG1-222ENST00000545308 GZF1Q9H116 711 aaPredicted RBP7.15□□□□□ -1.26
SNHG1-222ENST00000545308 MARK1Q9P0L2 795 aa7.15□□□□□ -1.26
SNHG1-222ENST00000545308 SCHIP1Q9P0W5 487 aaPredicted RBP7.15□□□□□ -1.26
SNHG1-222ENST00000545308 TFIP11Q9UBB9 837 aaKnown RBP7.15□□□□□ -1.26
SNHG1-222ENST00000545308 PRR12Q9ULL5 1215 aa7.15□□□□□ -1.26
SNHG1-222ENST00000545308 LMOD1P29536 600 aaPredicted RBP7.14□□□□□ -1.27
SNHG1-222ENST00000545308 TXLNAP40222 546 aa7.14□□□□□ -1.27
SNHG1-222ENST00000545308 CHRNA4P43681 627 aa7.14□□□□□ -1.27
SNHG1-222ENST00000545308 PCBP4P57723 403 aaKnown RBP7.14□□□□□ -1.27
SNHG1-222ENST00000545308 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.14□□□□□ -1.27
SNHG1-222ENST00000545308 ZDHHC1Q8WTX9 485 aa7.14□□□□□ -1.27
SNHG1-222ENST00000545308 STRN4Q9NRL3 753 aa7.14□□□□□ -1.27
SNHG1-222ENST00000545308 ZNF358Q9NW07 568 aa7.14□□□□□ -1.27
SNHG1-222ENST00000545308 PDE4CQ08493 712 aa7.13□□□□□ -1.27
SNHG1-222ENST00000545308 TEAD4Q15561 434 aa7.13□□□□□ -1.27
SNHG1-222ENST00000545308 L3MBTL2Q969R5 705 aa7.13□□□□□ -1.27
SNHG1-222ENST00000545308 USTQ9Y2C2 406 aa7.13□□□□□ -1.27
SNHG1-222ENST00000545308 EML1O00423 815 aa7.12□□□□□ -1.27
SNHG1-222ENST00000545308 EPHA4P54764 986 aa7.12□□□□□ -1.27
SNHG1-222ENST00000545308 PSME1Q06323 249 aa7.12□□□□□ -1.27
SNHG1-222ENST00000545308 NCOA4Q13772 614 aa7.12□□□□□ -1.27
SNHG1-222ENST00000545308 CDCA8Q53HL2 280 aa7.12□□□□□ -1.27
SNHG1-222ENST00000545308 TRIM11Q96F44 468 aa7.12□□□□□ -1.27
SNHG1-222ENST00000545308 MAFBQ9Y5Q3 323 aaPredicted RBP7.12□□□□□ -1.27
SNHG1-222ENST00000545308 ELOA3CA0A087WX78 387 aaPredicted RBP7.11□□□□□ -1.27
SNHG1-222ENST00000545308 ELOA3DA6NLF2 546 aaPredicted RBP7.11□□□□□ -1.27
SNHG1-222ENST00000545308 NOS2P35228 1153 aa7.11□□□□□ -1.27
SNHG1-222ENST00000545308 ELOA3BQ3SY89 546 aa7.11□□□□□ -1.27
SNHG1-222ENST00000545308 TMCO4Q5TGY1 634 aa7.11□□□□□ -1.27
SNHG1-222ENST00000545308 SLC9A9Q8IVB4 645 aa7.11□□□□□ -1.27
SNHG1-222ENST00000545308 RGS22Q8NE09 1264 aa7.11□□□□□ -1.27
SNHG1-222ENST00000545308 ELOA3Q8NG57 546 aa7.11□□□□□ -1.27
SNHG1-222ENST00000545308 MDFIQ99750 246 aa7.11□□□□□ -1.27
SNHG1-222ENST00000545308 BRD1O95696 1058 aa7.1□□□□□ -1.27
SNHG1-222ENST00000545308 LRRC69Q6ZNQ3 347 aa7.1□□□□□ -1.27
SNHG1-222ENST00000545308 SYT9Q86SS6 491 aa7.1□□□□□ -1.27
SNHG1-222ENST00000545308 C7orf43Q8WVR3 580 aa7.1□□□□□ -1.27
SNHG1-222ENST00000545308 PLVAPQ9BX97 442 aa7.1□□□□□ -1.27
SNHG1-222ENST00000545308 GPC6Q9Y625 555 aaPredicted RBP7.1□□□□□ -1.27
SNHG1-222ENST00000545308 TMEM88BA6NKF7 163 aa7.09□□□□□ -1.27
SNHG1-222ENST00000545308 USP17L5A8MUK1 530 aa7.09□□□□□ -1.27
SNHG1-222ENST00000545308 ATG7O95352 703 aa7.09□□□□□ -1.27
SNHG1-222ENST00000545308 ALAS2P22557 587 aa7.09□□□□□ -1.27
SNHG1-222ENST00000545308 MFAP1P55081 439 aaKnown RBP7.09□□□□□ -1.27
SNHG1-222ENST00000545308 TBCELQ5QJ74 424 aa7.09□□□□□ -1.27
SNHG1-222ENST00000545308 TNS4Q8IZW8 715 aa7.09□□□□□ -1.27
SNHG1-222ENST00000545308 DEPDC4Q8N2C3 294 aa7.09□□□□□ -1.27
SNHG1-222ENST00000545308 ZNF232Q9UNY5 417 aa7.09□□□□□ -1.27
SNHG1-222ENST00000545308 SERTM1A2A2V5 107 aa7.08□□□□□ -1.28
SNHG1-222ENST00000545308 ATP9BO43861 1147 aa7.08□□□□□ -1.28
SNHG1-222ENST00000545308 SIN3BO75182 1162 aa7.08□□□□□ -1.28
SNHG1-222ENST00000545308 SPATA31C1P0DKV0 1188 aa7.08□□□□□ -1.28
SNHG1-222ENST00000545308 KCNA1Q09470 495 aa7.08□□□□□ -1.28
SNHG1-222ENST00000545308 Q8N3U1 123 aa7.08□□□□□ -1.28
SNHG1-222ENST00000545308 NEUROD4Q9HD90 331 aa7.08□□□□□ -1.28
SNHG1-222ENST00000545308 MTMR7Q9Y216 660 aa7.08□□□□□ -1.28
SNHG1-222ENST00000545308 ADARB2-AS1A8MUL3 147 aa7.07□□□□□ -1.28
SNHG1-222ENST00000545308 ZBTB7BO15156 539 aaPredicted RBP7.07□□□□□ -1.28
SNHG1-222ENST00000545308 SFSWAPQ12872 951 aaKnown RBP7.07□□□□□ -1.28
SNHG1-222ENST00000545308 DOC2BQ14184 412 aa7.07□□□□□ -1.28
SNHG1-222ENST00000545308 SH3PXD2AQ5TCZ1 1133 aa7.07□□□□□ -1.28
SNHG1-222ENST00000545308 TRIM50Q86XT4 487 aa7.07□□□□□ -1.28
SNHG1-222ENST00000545308 ITGB7P26010 798 aa7.06□□□□□ -1.28
SNHG1-222ENST00000545308 GATA4P43694 442 aa7.06□□□□□ -1.28
SNHG1-222ENST00000545308 KANK4Q5T7N3 995 aaPredicted RBP7.06□□□□□ -1.28
SNHG1-222ENST00000545308 RHPN1Q8TCX5 695 aa7.06□□□□□ -1.28
SNHG1-222ENST00000545308 SLC30A3Q99726 388 aa7.06□□□□□ -1.28
SNHG1-222ENST00000545308 SPDYE3A6NKU9 549 aa7.05□□□□□ -1.28
SNHG1-222ENST00000545308 PATL2C9JE40 543 aaKnown RBP7.05□□□□□ -1.28
SNHG1-222ENST00000545308 ATP1A2P50993 1020 aa7.05□□□□□ -1.28
SNHG1-222ENST00000545308 C1orf53Q5VUE5 145 aa7.05□□□□□ -1.28
SNHG1-222ENST00000545308 CCDC102BQ68D86 513 aa7.05□□□□□ -1.28
SNHG1-222ENST00000545308 PLEKHM2Q8IWE5 1019 aa7.05□□□□□ -1.28
SNHG1-222ENST00000545308 TPCN2Q8NHX9 752 aa7.05□□□□□ -1.28
SNHG1-222ENST00000545308 TNFRSF25Q93038 417 aa7.05□□□□□ -1.28
SNHG1-222ENST00000545308 VRTNQ9H8Y1 702 aa7.05□□□□□ -1.28
SNHG1-222ENST00000545308 KIAA1024Q9UPX6 916 aa7.05□□□□□ -1.28
SNHG1-222ENST00000545308 HIRAP54198 1017 aaPredicted RBP7.04□□□□□ -1.28
SNHG1-222ENST00000545308 PSMA6P60900 246 aaKnown RBP7.04□□□□□ -1.28
SNHG1-222ENST00000545308 CLDN10P78369 228 aa7.04□□□□□ -1.28
SNHG1-222ENST00000545308 COL9A3Q14050 684 aaPredicted RBP7.04□□□□□ -1.28
SNHG1-222ENST00000545308 POTEAQ6S8J7 498 aa7.04□□□□□ -1.28
SNHG1-222ENST00000545308 SEMA6BQ9H3T3 888 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms