RNA–Protein interactions for RNA: ENST00000545228.2

TSEN54-203, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-203ENST00000545228 BCORQ6W2J9 1755 aa17.76■□□□□ 0.43
TSEN54-203ENST00000545228 KIF13BQ9NQT8 1826 aa17.75■□□□□ 0.43
TSEN54-203ENST00000545228 A0A0G2JLW4 131 aa17.75■□□□□ 0.43
TSEN54-203ENST00000545228 ELL2O00472 640 aaPredicted RBP17.75■□□□□ 0.43
TSEN54-203ENST00000545228 RGL2O15211 777 aa17.75■□□□□ 0.43
TSEN54-203ENST00000545228 ZPR1O75312 459 aa17.75■□□□□ 0.43
TSEN54-203ENST00000545228 KIF6Q6ZMV9 814 aa17.75■□□□□ 0.43
TSEN54-203ENST00000545228 CDCA7LQ96GN5 454 aa17.75■□□□□ 0.43
TSEN54-203ENST00000545228 ZNF652Q9Y2D9 606 aa17.75■□□□□ 0.43
TSEN54-203ENST00000545228 ZNF330Q9Y3S2 320 aaPredicted RBP17.75■□□□□ 0.43
TSEN54-203ENST00000545228 PRAMEF22A3QJZ6 481 aa17.74■□□□□ 0.43
TSEN54-203ENST00000545228 A1BGP04217 495 aa17.74■□□□□ 0.43
TSEN54-203ENST00000545228 EIF5P55010 431 aaKnown RBP17.74■□□□□ 0.43
TSEN54-203ENST00000545228 KRT24Q2M2I5 525 aa17.74■□□□□ 0.43
TSEN54-203ENST00000545228 KIAA1551Q9HCM1 1747 aa17.73■□□□□ 0.43
TSEN54-203ENST00000545228 DDX58O95786 925 aaKnown RBP17.73■□□□□ 0.43
TSEN54-203ENST00000545228 HSPA6P17066 643 aa17.73■□□□□ 0.43
TSEN54-203ENST00000545228 N4BP2Q86UW6 1770 aaPredicted RBP17.73■□□□□ 0.43
TSEN54-203ENST00000545228 VAMP4O75379 141 aa17.72■□□□□ 0.43
TSEN54-203ENST00000545228 MYL6BP14649 208 aa17.72■□□□□ 0.43
TSEN54-203ENST00000545228 DPEP1P16444 411 aa17.72■□□□□ 0.43
TSEN54-203ENST00000545228 ALDH1L2Q3SY69 923 aa17.72■□□□□ 0.43
TSEN54-203ENST00000545228 CHPF2Q9P2E5 772 aa17.72■□□□□ 0.43
TSEN54-203ENST00000545228 ARHGAP27Q6ZUM4 889 aa17.71■□□□□ 0.43
TSEN54-203ENST00000545228 DZIP3Q86Y13 1208 aaKnown RBP17.71■□□□□ 0.43
TSEN54-203ENST00000545228 TSPYL6Q8N831 410 aa17.71■□□□□ 0.43
TSEN54-203ENST00000545228 NECTIN2Q92692 538 aa17.71■□□□□ 0.43
TSEN54-203ENST00000545228 NARFQ9UHQ1 456 aa17.71■□□□□ 0.43
TSEN54-203ENST00000545228 ANKRD36CQ5JPF3 1778 aa17.71■□□□□ 0.43
TSEN54-203ENST00000545228 NUP98P52948 1817 aa17.7■□□□□ 0.42
TSEN54-203ENST00000545228 KIF3CO14782 793 aa17.7■□□□□ 0.42
TSEN54-203ENST00000545228 USP42Q9H9J4 1324 aaKnown RBP17.7■□□□□ 0.42
TSEN54-203ENST00000545228 HSP90AB3PQ58FF7 597 aa17.69■□□□□ 0.42
TSEN54-203ENST00000545228 CLEC4GQ6UXB4 293 aa17.69■□□□□ 0.42
TSEN54-203ENST00000545228 SRP68Q9UHB9 627 aaKnown RBP17.69■□□□□ 0.42
TSEN54-203ENST00000545228 ARFGEF2Q9Y6D5 1785 aa17.68■□□□□ 0.42
TSEN54-203ENST00000545228 NBPF26B4DH59 902 aa17.68■□□□□ 0.42
TSEN54-203ENST00000545228 ERVV-1B6SEH8 477 aa17.68■□□□□ 0.42
TSEN54-203ENST00000545228 FKBP8Q14318 412 aa17.68■□□□□ 0.42
TSEN54-203ENST00000545228 NBPF10Q6P3W6 841 aaKnown RBP17.68■□□□□ 0.42
TSEN54-203ENST00000545228 NBPF15Q8N660 670 aa17.68■□□□□ 0.42
TSEN54-203ENST00000545228 KIF16BQ96L93 1317 aa17.68■□□□□ 0.42
TSEN54-203ENST00000545228 SLC4A2P04920 1241 aa17.67■□□□□ 0.42
TSEN54-203ENST00000545228 PIM2Q9P1W9 311 aa17.67■□□□□ 0.42
TSEN54-203ENST00000545228 MAP3K15Q6ZN16 1313 aa17.67■□□□□ 0.42
TSEN54-203ENST00000545228 KCNA3P22001 575 aa17.66■□□□□ 0.42
TSEN54-203ENST00000545228 PDIA6Q15084 440 aa17.66■□□□□ 0.42
TSEN54-203ENST00000545228 SMC4Q9NTJ3 1288 aa17.66■□□□□ 0.42
TSEN54-203ENST00000545228 PIP4K2AP48426 406 aaPredicted RBP17.65■□□□□ 0.42
TSEN54-203ENST00000545228 DDR1Q08345 913 aa17.65■□□□□ 0.42
TSEN54-203ENST00000545228 COPS6Q7L5N1 327 aa17.65■□□□□ 0.42
TSEN54-203ENST00000545228 PLBD2Q8NHP8 589 aa17.65■□□□□ 0.42
TSEN54-203ENST00000545228 XAGE3Q8WTP9 111 aa17.65■□□□□ 0.42
TSEN54-203ENST00000545228 TBC1D2BQ9UPU7 963 aa17.65■□□□□ 0.42
TSEN54-203ENST00000545228 PTPRCP08575 1304 aa17.65■□□□□ 0.42
TSEN54-203ENST00000545228 BRCA1P38398 1863 aaKnown RBP17.65■□□□□ 0.42
TSEN54-203ENST00000545228 TOMM70O94826 608 aa17.64■□□□□ 0.41
TSEN54-203ENST00000545228 AIMP1Q12904 312 aaKnown RBP17.64■□□□□ 0.41
TSEN54-203ENST00000545228 DALRD3Q5D0E6 543 aaKnown RBP17.64■□□□□ 0.41
TSEN54-203ENST00000545228 USPL1Q5W0Q7 1092 aa17.64■□□□□ 0.41
TSEN54-203ENST00000545228 ANKRD13DQ6ZTN6 518 aa17.64■□□□□ 0.41
TSEN54-203ENST00000545228 RIC3Q7Z5B4 369 aa17.64■□□□□ 0.41
TSEN54-203ENST00000545228 AFDNP55196 1824 aaKnown RBP17.63■□□□□ 0.41
TSEN54-203ENST00000545228 IPO8O15397 1037 aaKnown RBP17.63■□□□□ 0.41
TSEN54-203ENST00000545228 BRPF1P55201 1214 aaPredicted RBP17.63■□□□□ 0.41
TSEN54-203ENST00000545228 NEXNQ0ZGT2 675 aa17.63■□□□□ 0.41
TSEN54-203ENST00000545228 FLIIQ13045 1269 aa17.63■□□□□ 0.41
TSEN54-203ENST00000545228 FKBP5Q13451 457 aaPredicted RBP17.63■□□□□ 0.41
TSEN54-203ENST00000545228 IFFO2Q5TF58 517 aa17.63■□□□□ 0.41
TSEN54-203ENST00000545228 C9orf131Q5VYM1 1079 aa17.63■□□□□ 0.41
TSEN54-203ENST00000545228 POLRMTO00411 1230 aaKnown RBP17.62■□□□□ 0.41
TSEN54-203ENST00000545228 CAMTA2O94983 1202 aa17.62■□□□□ 0.41
TSEN54-203ENST00000545228 ANXA1P04083 346 aa17.62■□□□□ 0.41
TSEN54-203ENST00000545228 TM4SF1P30408 202 aa17.62■□□□□ 0.41
TSEN54-203ENST00000545228 PROSER3Q2NL68 480 aa17.62■□□□□ 0.41
TSEN54-203ENST00000545228 GIGYF2Q6Y7W6 1299 aaKnown RBP17.62■□□□□ 0.41
TSEN54-203ENST00000545228 LRP10Q7Z4F1 713 aa17.62■□□□□ 0.41
TSEN54-203ENST00000545228 CARMIL3Q8ND23 1372 aa17.62■□□□□ 0.41
TSEN54-203ENST00000545228 ARFGEF1Q9Y6D6 1849 aa17.61■□□□□ 0.41
TSEN54-203ENST00000545228 CHRNA5P30532 468 aa17.61■□□□□ 0.41
TSEN54-203ENST00000545228 RARSP54136 660 aaKnown RBP17.61■□□□□ 0.41
TSEN54-203ENST00000545228 PARP10Q53GL7 1025 aa17.61■□□□□ 0.41
TSEN54-203ENST00000545228 SSH1Q8WYL5 1049 aa17.61■□□□□ 0.41
TSEN54-203ENST00000545228 SETDB2Q96T68 719 aa17.61■□□□□ 0.41
TSEN54-203ENST00000545228 ZBTB3Q9H5J0 574 aa17.61■□□□□ 0.41
TSEN54-203ENST00000545228 NMRK2Q9NPI5 230 aa17.61■□□□□ 0.41
TSEN54-203ENST00000545228 NPHP1O15259 732 aa17.6■□□□□ 0.41
TSEN54-203ENST00000545228 APLP1P51693 650 aa17.6■□□□□ 0.41
TSEN54-203ENST00000545228 KSR2Q6VAB6 950 aa17.6■□□□□ 0.41
TSEN54-203ENST00000545228 TTLL7Q6ZT98 887 aa17.6■□□□□ 0.41
TSEN54-203ENST00000545228 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.6■□□□□ 0.41
TSEN54-203ENST00000545228 NYXQ9GZU5 481 aa17.6■□□□□ 0.41
TSEN54-203ENST00000545228 IBTKQ9P2D0 1353 aaPredicted RBP17.59■□□□□ 0.41
TSEN54-203ENST00000545228 RNF123Q5XPI4 1314 aa17.59■□□□□ 0.41
TSEN54-203ENST00000545228 MRPL50Q8N5N7 158 aaKnown RBP17.59■□□□□ 0.41
TSEN54-203ENST00000545228 API5Q9BZZ5 524 aaKnown RBP17.59■□□□□ 0.41
TSEN54-203ENST00000545228 PHAXQ9H814 394 aaKnown RBP17.59■□□□□ 0.41
TSEN54-203ENST00000545228 TCERG1O14776 1098 aaKnown RBP17.58■□□□□ 0.4
TSEN54-203ENST00000545228 MS4A1P11836 297 aa17.58■□□□□ 0.4
TSEN54-203ENST00000545228 HSP90B1P14625 803 aaKnown RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms