RNA–Protein interactions for RNA: ENST00000545153.5

PTPN6-223, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 3

Gene PTPN6, Length 959 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-223ENST00000545153 LRP10Q7Z4F1 713 aa18.58■□□□□ 0.56
PTPN6-223ENST00000545153 ZBTB3Q9H5J0 574 aa18.58■□□□□ 0.56
PTPN6-223ENST00000545153 DDX21Q9NR30 783 aaKnown RBP eCLIP18.58■□□□□ 0.56
PTPN6-223ENST00000545153 CHPF2Q9P2E5 772 aa18.58■□□□□ 0.56
PTPN6-223ENST00000545153 MAP3K15Q6ZN16 1313 aa18.57■□□□□ 0.56
PTPN6-223ENST00000545153 ERVV-1B6SEH8 477 aa18.57■□□□□ 0.56
PTPN6-223ENST00000545153 DPEP1P16444 411 aa18.57■□□□□ 0.56
PTPN6-223ENST00000545153 AIMP1Q12904 312 aaKnown RBP18.57■□□□□ 0.56
PTPN6-223ENST00000545153 COPS6Q7L5N1 327 aa18.57■□□□□ 0.56
PTPN6-223ENST00000545153 RGL2O15211 777 aa18.56■□□□□ 0.56
PTPN6-223ENST00000545153 CCDC24Q8N4L8 307 aa18.56■□□□□ 0.56
PTPN6-223ENST00000545153 TSPYL6Q8N831 410 aa18.56■□□□□ 0.56
PTPN6-223ENST00000545153 XAGE3Q8WTP9 111 aa18.56■□□□□ 0.56
PTPN6-223ENST00000545153 DBF4Q9UBU7 674 aaPredicted RBP18.56■□□□□ 0.56
PTPN6-223ENST00000545153 NIP7Q9Y221 180 aaKnown RBP eCLIP18.56■□□□□ 0.56
PTPN6-223ENST00000545153 YBX3P16989 372 aaKnown RBP eCLIP18.55■□□□□ 0.56
PTPN6-223ENST00000545153 SPINK5Q9NQ38 1064 aaPredicted RBP18.55■□□□□ 0.56
PTPN6-223ENST00000545153 C10orf71Q711Q0 1435 aa18.55■□□□□ 0.56
PTPN6-223ENST00000545153 FAM177BA6PVY3 158 aa18.54■□□□□ 0.56
PTPN6-223ENST00000545153 CHRNA5P30532 468 aa18.54■□□□□ 0.56
PTPN6-223ENST00000545153 PRR5LQ6MZQ0 368 aa18.54■□□□□ 0.56
PTPN6-223ENST00000545153 CARMIL3Q8ND23 1372 aa18.54■□□□□ 0.56
PTPN6-223ENST00000545153 NPHP1O15259 732 aa18.53■□□□□ 0.56
PTPN6-223ENST00000545153 KCNA3P22001 575 aa18.53■□□□□ 0.56
PTPN6-223ENST00000545153 GOLGA2Q08379 1002 aa18.53■□□□□ 0.56
PTPN6-223ENST00000545153 NBPF5PQ86XG9 351 aaPredicted RBP18.53■□□□□ 0.56
PTPN6-223ENST00000545153 HYPKQ9NX55 129 aa18.53■□□□□ 0.56
PTPN6-223ENST00000545153 FANCIQ9NVI1 1328 aa18.52■□□□□ 0.56
PTPN6-223ENST00000545153 GPTP24298 496 aa18.52■□□□□ 0.56
PTPN6-223ENST00000545153 GIGYF2Q6Y7W6 1299 aaKnown RBP18.52■□□□□ 0.56
PTPN6-223ENST00000545153 CNBD1Q8NA66 436 aa18.52■□□□□ 0.56
PTPN6-223ENST00000545153 TCERG1O14776 1098 aaKnown RBP18.51■□□□□ 0.55
PTPN6-223ENST00000545153 GRIN3BO60391 1043 aa18.51■□□□□ 0.55
PTPN6-223ENST00000545153 EXOSC9Q06265 439 aaKnown RBP18.51■□□□□ 0.55
PTPN6-223ENST00000545153 TWISTNBQ3B726 338 aaPredicted RBP18.51■□□□□ 0.55
PTPN6-223ENST00000545153 CCDC30Q5VVM6 783 aa18.51■□□□□ 0.55
PTPN6-223ENST00000545153 TPTE2Q6XPS3 522 aa18.51■□□□□ 0.55
PTPN6-223ENST00000545153 BRIP1Q9BX63 1249 aa18.51■□□□□ 0.55
PTPN6-223ENST00000545153 CHMP4AQ9BY43 222 aa18.51■□□□□ 0.55
PTPN6-223ENST00000545153 UTRNP46939 3433 aa18.51■□□□□ 0.55
PTPN6-223ENST00000545153 PXDNLA1KZ92 1463 aa18.51■□□□□ 0.55
PTPN6-223ENST00000545153 LAMB4A4D0S4 1761 aa18.5■□□□□ 0.55
PTPN6-223ENST00000545153 ST5P78524 1137 aa18.5■□□□□ 0.55
PTPN6-223ENST00000545153 C2CD5Q86YS7 1000 aa18.5■□□□□ 0.55
PTPN6-223ENST00000545153 ZNF34Q8IZ26 560 aa18.5■□□□□ 0.55
PTPN6-223ENST00000545153 MYH16Q9H6N6 1097 aa18.5■□□□□ 0.55
PTPN6-223ENST00000545153 PHAXQ9H814 394 aaKnown RBP18.5■□□□□ 0.55
PTPN6-223ENST00000545153 PIM2Q9P1W9 311 aa18.5■□□□□ 0.55
PTPN6-223ENST00000545153 BCS1LQ9Y276 419 aa18.5■□□□□ 0.55
PTPN6-223ENST00000545153 ZNF521Q96K83 1311 aa18.49■□□□□ 0.55
PTPN6-223ENST00000545153 H0YIN7 160 aa18.49■□□□□ 0.55
PTPN6-223ENST00000545153 GTF2E1P29083 439 aaPredicted RBP18.49■□□□□ 0.55
PTPN6-223ENST00000545153 ANKRD13DQ6ZTN6 518 aa18.49■□□□□ 0.55
PTPN6-223ENST00000545153 GOLGB1Q14789 3259 aaKnown RBP18.49■□□□□ 0.55
PTPN6-223ENST00000545153 PDE6BP35913 854 aa18.48■□□□□ 0.55
PTPN6-223ENST00000545153 SUSD4Q5VX71 490 aa18.48■□□□□ 0.55
PTPN6-223ENST00000545153 VAMP4O75379 141 aa18.47■□□□□ 0.55
PTPN6-223ENST00000545153 TCIRG1Q13488 830 aa18.47■□□□□ 0.55
PTPN6-223ENST00000545153 DALRD3Q5D0E6 543 aaKnown RBP18.47■□□□□ 0.55
PTPN6-223ENST00000545153 PLBD2Q8NHP8 589 aa18.47■□□□□ 0.55
PTPN6-223ENST00000545153 SCN7AQ01118 1682 aa18.47■□□□□ 0.55
PTPN6-223ENST00000545153 HSP90AB3PQ58FF7 597 aa18.46■□□□□ 0.55
PTPN6-223ENST00000545153 NUTM1Q86Y26 1132 aa18.46■□□□□ 0.55
PTPN6-223ENST00000545153 STK31Q9BXU1 1019 aa18.46■□□□□ 0.55
PTPN6-223ENST00000545153 NYXQ9GZU5 481 aa18.46■□□□□ 0.55
PTPN6-223ENST00000545153 UBN2Q6ZU65 1347 aa18.46■□□□□ 0.55
PTPN6-223ENST00000545153 SLC4A2P04920 1241 aa18.45■□□□□ 0.54
PTPN6-223ENST00000545153 ERFEQ4G0M1 354 aa18.45■□□□□ 0.54
PTPN6-223ENST00000545153 PARP10Q53GL7 1025 aa18.45■□□□□ 0.54
PTPN6-223ENST00000545153 RIC3Q7Z5B4 369 aa18.45■□□□□ 0.54
PTPN6-223ENST00000545153 ZNF622Q969S3 477 aaKnown RBP eCLIP18.45■□□□□ 0.54
PTPN6-223ENST00000545153 PDZRN3Q9UPQ7 1066 aa18.45■□□□□ 0.54
PTPN6-223ENST00000545153 ATP10DQ9P241 1426 aa18.45■□□□□ 0.54
PTPN6-223ENST00000545153 YY1P25490 414 aa18.44■□□□□ 0.54
PTPN6-223ENST00000545153 PPP1R42Q7Z4L9 355 aa18.44■□□□□ 0.54
PTPN6-223ENST00000545153 E9PSI1 815 aa18.43■□□□□ 0.54
PTPN6-223ENST00000545153 ATP5J2-PTCD1G3V325 749 aa18.43■□□□□ 0.54
PTPN6-223ENST00000545153 SLFN5Q08AF3 891 aa18.43■□□□□ 0.54
PTPN6-223ENST00000545153 ARHGAP27Q6ZUM4 889 aa18.43■□□□□ 0.54
PTPN6-223ENST00000545153 G2E3Q7L622 706 aa18.43■□□□□ 0.54
PTPN6-223ENST00000545153 NLRP10Q86W26 655 aa18.43■□□□□ 0.54
PTPN6-223ENST00000545153 TTLL6Q8N841 843 aa18.43■□□□□ 0.54
PTPN6-223ENST00000545153 ZNF428Q96B54 188 aa18.43■□□□□ 0.54
PTPN6-223ENST00000545153 CDCA7LQ96GN5 454 aa18.43■□□□□ 0.54
PTPN6-223ENST00000545153 UTP14AQ9BVJ6 771 aaKnown RBP18.43■□□□□ 0.54
PTPN6-223ENST00000545153 NTSR2O95665 410 aa18.42■□□□□ 0.54
PTPN6-223ENST00000545153 BCORQ6W2J9 1755 aa18.42■□□□□ 0.54
PTPN6-223ENST00000545153 NRXN2Q9P2S2 1712 aa18.41■□□□□ 0.54
PTPN6-223ENST00000545153 KLRG2A4D1S0 409 aaPredicted RBP18.41■□□□□ 0.54
PTPN6-223ENST00000545153 DDX58O95786 925 aaKnown RBP18.41■□□□□ 0.54
PTPN6-223ENST00000545153 SRGNP10124 158 aa18.41■□□□□ 0.54
PTPN6-223ENST00000545153 ISCA1Q9BUE6 129 aa18.41■□□□□ 0.54
PTPN6-223ENST00000545153 KIF13BQ9NQT8 1826 aa18.41■□□□□ 0.54
PTPN6-223ENST00000545153 AFDNP55196 1824 aaKnown RBP18.4■□□□□ 0.54
PTPN6-223ENST00000545153 MASTLQ96GX5 879 aa18.4■□□□□ 0.54
PTPN6-223ENST00000545153 TRMT112Q9UI30 125 aaKnown RBP18.4■□□□□ 0.54
PTPN6-223ENST00000545153 PI4KAP2A4QPH2 592 aa18.39■□□□□ 0.53
PTPN6-223ENST00000545153 SLC10A5Q5PT55 438 aa18.39■□□□□ 0.53
PTPN6-223ENST00000545153 STYK1Q6J9G0 422 aa18.39■□□□□ 0.53
PTPN6-223ENST00000545153 KSR2Q6VAB6 950 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms