RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 A0A087WZG4 1122 aa16.75■□□□□ 0.27
DDX11-227ENST00000544652 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.75■□□□□ 0.27
DDX11-227ENST00000544652 TRAPPC3LQ5T215 181 aa16.75■□□□□ 0.27
DDX11-227ENST00000544652 COPS6Q7L5N1 327 aa16.75■□□□□ 0.27
DDX11-227ENST00000544652 G2E3Q7L622 706 aa16.75■□□□□ 0.27
DDX11-227ENST00000544652 FLAD1Q8NFF5 587 aa16.75■□□□□ 0.27
DDX11-227ENST00000544652 SMC4Q9NTJ3 1288 aa16.75■□□□□ 0.27
DDX11-227ENST00000544652 RGL2O15211 777 aa16.74■□□□□ 0.27
DDX11-227ENST00000544652 BCAR3O75815 825 aa16.74■□□□□ 0.27
DDX11-227ENST00000544652 XAGE3Q8WTP9 111 aa16.74■□□□□ 0.27
DDX11-227ENST00000544652 ARHGEF1Q92888 912 aaKnown RBP16.74■□□□□ 0.27
DDX11-227ENST00000544652 BCL2L13Q9BXK5 485 aa16.74■□□□□ 0.27
DDX11-227ENST00000544652 FLIIQ13045 1269 aa16.73■□□□□ 0.27
DDX11-227ENST00000544652 TTLL7Q6ZT98 887 aa16.73■□□□□ 0.27
DDX11-227ENST00000544652 SMIM5Q71RC9 77 aa16.73■□□□□ 0.27
DDX11-227ENST00000544652 DZIP3Q86Y13 1208 aaKnown RBP16.73■□□□□ 0.27
DDX11-227ENST00000544652 COL23A1Q86Y22 540 aaPredicted RBP16.73■□□□□ 0.27
DDX11-227ENST00000544652 NARFQ9UHQ1 456 aa16.73■□□□□ 0.27
DDX11-227ENST00000544652 NRXN2Q9P2S2 1712 aa16.73■□□□□ 0.27
DDX11-227ENST00000544652 PTPRCP08575 1304 aa16.72■□□□□ 0.27
DDX11-227ENST00000544652 MAP3K15Q6ZN16 1313 aa16.72■□□□□ 0.27
DDX11-227ENST00000544652 KIF16BQ96L93 1317 aa16.72■□□□□ 0.27
DDX11-227ENST00000544652 USP42Q9H9J4 1324 aaKnown RBP16.72■□□□□ 0.27
DDX11-227ENST00000544652 ERVV-1B6SEH8 477 aa16.72■□□□□ 0.27
DDX11-227ENST00000544652 PHF14O94880 888 aa16.72■□□□□ 0.27
DDX11-227ENST00000544652 NPM2Q86SE8 214 aaKnown RBP16.72■□□□□ 0.27
DDX11-227ENST00000544652 ZNF330Q9Y3S2 320 aaPredicted RBP16.72■□□□□ 0.27
DDX11-227ENST00000544652 ADCY9O60503 1353 aa16.72■□□□□ 0.27
DDX11-227ENST00000544652 CAMTA2O94983 1202 aa16.71■□□□□ 0.27
DDX11-227ENST00000544652 AIMP1Q12904 312 aaKnown RBP16.71■□□□□ 0.27
DDX11-227ENST00000544652 PLBD2Q8NHP8 589 aa16.71■□□□□ 0.27
DDX11-227ENST00000544652 ARHGAP45Q92619 1136 aa16.71■□□□□ 0.27
DDX11-227ENST00000544652 TBC1D2BQ9UPU7 963 aa16.71■□□□□ 0.27
DDX11-227ENST00000544652 PXDNLA1KZ92 1463 aa16.71■□□□□ 0.27
DDX11-227ENST00000544652 MYH3P11055 1940 aa16.7■□□□□ 0.26
DDX11-227ENST00000544652 LAMB2P55268 1798 aa16.7■□□□□ 0.26
DDX11-227ENST00000544652 DDX58O95786 925 aaKnown RBP16.7■□□□□ 0.26
DDX11-227ENST00000544652 RFC4P35249 363 aa16.7■□□□□ 0.26
DDX11-227ENST00000544652 KSR2Q6VAB6 950 aa16.7■□□□□ 0.26
DDX11-227ENST00000544652 KIF6Q6ZMV9 814 aa16.7■□□□□ 0.26
DDX11-227ENST00000544652 ANKRD13DQ6ZTN6 518 aa16.7■□□□□ 0.26
DDX11-227ENST00000544652 BCL2L12Q9HB09 334 aa16.7■□□□□ 0.26
DDX11-227ENST00000544652 MKRN4PQ13434 485 aaPredicted RBP16.69■□□□□ 0.26
DDX11-227ENST00000544652 FKBP5Q13451 457 aaPredicted RBP16.69■□□□□ 0.26
DDX11-227ENST00000544652 CLEC4GQ6UXB4 293 aa16.69■□□□□ 0.26
DDX11-227ENST00000544652 NOB1Q9ULX3 412 aaKnown RBP16.69■□□□□ 0.26
DDX11-227ENST00000544652 ATP10DQ9P241 1426 aa16.69■□□□□ 0.26
DDX11-227ENST00000544652 ZPR1O75312 459 aa16.68■□□□□ 0.26
DDX11-227ENST00000544652 HLFQ16534 295 aa16.68■□□□□ 0.26
DDX11-227ENST00000544652 USPL1Q5W0Q7 1092 aa16.68■□□□□ 0.26
DDX11-227ENST00000544652 GIGYF2Q6Y7W6 1299 aaKnown RBP16.68■□□□□ 0.26
DDX11-227ENST00000544652 SRP68Q9UHB9 627 aaKnown RBP16.68■□□□□ 0.26
DDX11-227ENST00000544652 PI4KAP2A4QPH2 592 aa16.67■□□□□ 0.26
DDX11-227ENST00000544652 IPO8O15397 1037 aaKnown RBP16.67■□□□□ 0.26
DDX11-227ENST00000544652 GYS1P13807 737 aa16.67■□□□□ 0.26
DDX11-227ENST00000544652 R3HDM1Q15032 1099 aaKnown RBP16.67■□□□□ 0.26
DDX11-227ENST00000544652 PI4KAP1Q8N8J0 262 aa16.67■□□□□ 0.26
DDX11-227ENST00000544652 SLC16A10Q8TF71 515 aa16.67■□□□□ 0.26
DDX11-227ENST00000544652 PDGFDQ9GZP0 370 aaPredicted RBP16.67■□□□□ 0.26
DDX11-227ENST00000544652 ZBTB3Q9H5J0 574 aa16.67■□□□□ 0.26
DDX11-227ENST00000544652 KIF13BQ9NQT8 1826 aa16.67■□□□□ 0.26
DDX11-227ENST00000544652 DDX60Q8IY21 1712 aaKnown RBP16.67■□□□□ 0.26
DDX11-227ENST00000544652 RNF123Q5XPI4 1314 aa16.67■□□□□ 0.26
DDX11-227ENST00000544652 ZKSCAN2Q63HK3 967 aa16.66■□□□□ 0.26
DDX11-227ENST00000544652 ATF7IPQ6VMQ6 1270 aa16.66■□□□□ 0.26
DDX11-227ENST00000544652 RIC3Q7Z5B4 369 aa16.66■□□□□ 0.26
DDX11-227ENST00000544652 METTL22Q9BUU2 404 aaPredicted RBP16.66■□□□□ 0.26
DDX11-227ENST00000544652 API5Q9BZZ5 524 aaKnown RBP16.66■□□□□ 0.26
DDX11-227ENST00000544652 ZNF652Q9Y2D9 606 aa16.66■□□□□ 0.26
DDX11-227ENST00000544652 MAP3K2Q9Y2U5 619 aa16.66■□□□□ 0.26
DDX11-227ENST00000544652 IBTKQ9P2D0 1353 aaPredicted RBP16.65■□□□□ 0.26
DDX11-227ENST00000544652 ANKRD31Q8N7Z5 1873 aa16.65■□□□□ 0.26
DDX11-227ENST00000544652 TRIM27P14373 513 aa16.65■□□□□ 0.26
DDX11-227ENST00000544652 TCIRG1Q13488 830 aa16.65■□□□□ 0.26
DDX11-227ENST00000544652 HSP90AB3PQ58FF7 597 aa16.65■□□□□ 0.26
DDX11-227ENST00000544652 DNAAF4Q8WXU2 420 aa16.65■□□□□ 0.26
DDX11-227ENST00000544652 ARXQ96QS3 562 aa16.65■□□□□ 0.26
DDX11-227ENST00000544652 ABCC4O15439 1325 aa16.65■□□□□ 0.26
DDX11-227ENST00000544652 F6X3S4 739 aa16.64■□□□□ 0.25
DDX11-227ENST00000544652 CENPBP07199 599 aaPredicted RBP16.64■□□□□ 0.25
DDX11-227ENST00000544652 ZNF34Q8IZ26 560 aa16.64■□□□□ 0.25
DDX11-227ENST00000544652 FRAT1Q92837 279 aaPredicted RBP16.64■□□□□ 0.25
DDX11-227ENST00000544652 TM4SF1P30408 202 aa16.63■□□□□ 0.25
DDX11-227ENST00000544652 TRIM28Q13263 835 aaKnown RBP16.63■□□□□ 0.25
DDX11-227ENST00000544652 NLGN1Q8N2Q7 840 aa16.63■□□□□ 0.25
DDX11-227ENST00000544652 ISCA1Q9BUE6 129 aa16.63■□□□□ 0.25
DDX11-227ENST00000544652 PSDA5PKW4 1024 aaPredicted RBP16.62■□□□□ 0.25
DDX11-227ENST00000544652 BEND3Q5T5X7 828 aa16.62■□□□□ 0.25
DDX11-227ENST00000544652 TBC1D9BQ66K14 1250 aa16.62■□□□□ 0.25
DDX11-227ENST00000544652 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.62■□□□□ 0.25
DDX11-227ENST00000544652 TNNQ9UQP3 1299 aa16.62■□□□□ 0.25
DDX11-227ENST00000544652 IGKV5-2P06315 115 aa16.61■□□□□ 0.25
DDX11-227ENST00000544652 RRP1P56182 461 aaKnown RBP16.61■□□□□ 0.25
DDX11-227ENST00000544652 LINS1Q8NG48 757 aa16.61■□□□□ 0.25
DDX11-227ENST00000544652 MYD88Q99836 296 aa16.61■□□□□ 0.25
DDX11-227ENST00000544652 UBN2Q6ZU65 1347 aa16.61■□□□□ 0.25
DDX11-227ENST00000544652 DLEC1Q9Y238 1755 aa16.6■□□□□ 0.25
DDX11-227ENST00000544652 PLIN1O60240 522 aa16.6■□□□□ 0.25
DDX11-227ENST00000544652 NEXNQ0ZGT2 675 aa16.6■□□□□ 0.25
DDX11-227ENST00000544652 POLA2Q14181 598 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms