RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 CC2D1BQ5T0F9 858 aaKnown RBP20.92■□□□□ 0.94
CD4-212ENST00000544344 C7orf43Q8WVR3 580 aa20.92■□□□□ 0.94
CD4-212ENST00000544344 SETDB2Q96T68 719 aa20.92■□□□□ 0.94
CD4-212ENST00000544344 CEMIPQ8WUJ3 1361 aa20.92■□□□□ 0.94
CD4-212ENST00000544344 SCN4AP35499 1836 aa20.91■□□□□ 0.94
CD4-212ENST00000544344 FMNL2Q96PY5 1086 aa20.91■□□□□ 0.94
CD4-212ENST00000544344 PASKQ96RG2 1323 aa20.91■□□□□ 0.94
CD4-212ENST00000544344 GAS2L2Q8NHY3 880 aa20.9■□□□□ 0.94
CD4-212ENST00000544344 MASTLQ96GX5 879 aa20.9■□□□□ 0.94
CD4-212ENST00000544344 L3MBTL3Q96JM7 780 aaPredicted RBP20.9■□□□□ 0.94
CD4-212ENST00000544344 CNTNAP1P78357 1384 aa20.89■□□□□ 0.93
CD4-212ENST00000544344 FOXN1O15353 648 aa20.88■□□□□ 0.93
CD4-212ENST00000544344 ST5P78524 1137 aa20.88■□□□□ 0.93
CD4-212ENST00000544344 SOGA3Q5TF21 947 aa20.88■□□□□ 0.93
CD4-212ENST00000544344 DZIP3Q86Y13 1208 aaKnown RBP20.88■□□□□ 0.93
CD4-212ENST00000544344 TAF1DQ9H5J8 278 aaPredicted RBP20.88■□□□□ 0.93
CD4-212ENST00000544344 U2SURPO15042 1029 aaKnown RBP20.87■□□□□ 0.93
CD4-212ENST00000544344 PIP4K2AP48426 406 aaPredicted RBP20.87■□□□□ 0.93
CD4-212ENST00000544344 LDHDQ86WU2 507 aa20.87■□□□□ 0.93
CD4-212ENST00000544344 PHACTR3Q96KR7 559 aa20.87■□□□□ 0.93
CD4-212ENST00000544344 USP16Q9Y5T5 823 aa20.87■□□□□ 0.93
CD4-212ENST00000544344 ADAMTSL1Q8N6G6 1762 aa20.87■□□□□ 0.93
CD4-212ENST00000544344 PRAMEF22A3QJZ6 481 aa20.86■□□□□ 0.93
CD4-212ENST00000544344 KLRG2A4D1S0 409 aaPredicted RBP20.86■□□□□ 0.93
CD4-212ENST00000544344 ITGBL1O95965 494 aaPredicted RBP20.86■□□□□ 0.93
CD4-212ENST00000544344 NPC1L1Q9UHC9 1359 aa20.85■□□□□ 0.93
CD4-212ENST00000544344 IQCA1LA6NCM1 817 aa20.85■□□□□ 0.93
CD4-212ENST00000544344 NPHP1O15259 732 aa20.85■□□□□ 0.93
CD4-212ENST00000544344 ZNF541Q9H0D2 1346 aa20.84■□□□□ 0.93
CD4-212ENST00000544344 BTBD11A6QL63 1104 aa20.84■□□□□ 0.93
CD4-212ENST00000544344 CCDC93Q567U6 631 aa20.84■□□□□ 0.93
CD4-212ENST00000544344 OLFM4Q6UX06 510 aa20.84■□□□□ 0.93
CD4-212ENST00000544344 CLEC4GQ6UXB4 293 aa20.84■□□□□ 0.93
CD4-212ENST00000544344 NPM2Q86SE8 214 aaKnown RBP20.83■□□□□ 0.93
CD4-212ENST00000544344 NBPF5PQ86XG9 351 aaPredicted RBP20.83■□□□□ 0.93
CD4-212ENST00000544344 NPR1P16066 1061 aa20.82■□□□□ 0.92
CD4-212ENST00000544344 VEGFBP49765 207 aa20.82■□□□□ 0.92
CD4-212ENST00000544344 FKBP4Q02790 459 aaKnown RBP eCLIP20.82■□□□□ 0.92
CD4-212ENST00000544344 RSPH6AQ9H0K4 717 aa20.82■□□□□ 0.92
CD4-212ENST00000544344 PRDM10Q9NQV6 1147 aa20.82■□□□□ 0.92
CD4-212ENST00000544344 ZNF277Q9NRM2 450 aaPredicted RBP20.82■□□□□ 0.92
CD4-212ENST00000544344 SNED1Q8TER0 1413 aa20.81■□□□□ 0.92
CD4-212ENST00000544344 TMEM88BA6NKF7 163 aa20.81■□□□□ 0.92
CD4-212ENST00000544344 NBPF26B4DH59 902 aa20.81■□□□□ 0.92
CD4-212ENST00000544344 PRKAR2BP31323 418 aa20.81■□□□□ 0.92
CD4-212ENST00000544344 NBPF10Q6P3W6 841 aaKnown RBP20.81■□□□□ 0.92
CD4-212ENST00000544344 NBPF15Q8N660 670 aa20.81■□□□□ 0.92
CD4-212ENST00000544344 RGL2O15211 777 aa20.78■□□□□ 0.92
CD4-212ENST00000544344 SNRPA1P09661 255 aaKnown RBP20.78■□□□□ 0.92
CD4-212ENST00000544344 EPHX2P34913 555 aa20.78■□□□□ 0.92
CD4-212ENST00000544344 CNGB1Q14028 1251 aaPredicted RBP20.78■□□□□ 0.92
CD4-212ENST00000544344 EAPPQ56P03 285 aaPredicted RBP20.78■□□□□ 0.92
CD4-212ENST00000544344 WBP1LQ9NX94 342 aa20.78■□□□□ 0.92
CD4-212ENST00000544344 HACL1Q9UJ83 578 aa20.78■□□□□ 0.92
CD4-212ENST00000544344 ZNF652Q9Y2D9 606 aa20.78■□□□□ 0.92
CD4-212ENST00000544344 FZD9O00144 591 aa20.77■□□□□ 0.92
CD4-212ENST00000544344 CTCFP49711 727 aaPredicted RBP20.77■□□□□ 0.92
CD4-212ENST00000544344 TPTE2Q6XPS3 522 aa20.77■□□□□ 0.92
CD4-212ENST00000544344 RTKN2Q8IZC4 609 aa20.77■□□□□ 0.92
CD4-212ENST00000544344 NIP7Q9Y221 180 aaKnown RBP eCLIP20.77■□□□□ 0.92
CD4-212ENST00000544344 MCM10Q7L590 875 aa20.76■□□□□ 0.91
CD4-212ENST00000544344 COL4A5P29400 1685 aa20.76■□□□□ 0.91
CD4-212ENST00000544344 RNF123Q5XPI4 1314 aa20.76■□□□□ 0.91
CD4-212ENST00000544344 RASSF10A6NK89 507 aa20.75■□□□□ 0.91
CD4-212ENST00000544344 IARSP41252 1262 aaKnown RBP20.75■□□□□ 0.91
CD4-212ENST00000544344 HLFQ16534 295 aa20.75■□□□□ 0.91
CD4-212ENST00000544344 SYNE4Q8N205 404 aa20.75■□□□□ 0.91
CD4-212ENST00000544344 FAM177BA6PVY3 158 aa20.74■□□□□ 0.91
CD4-212ENST00000544344 LTBP1Q14766 1721 aa20.74■□□□□ 0.91
CD4-212ENST00000544344 MAP1SQ66K74 1059 aaPredicted RBP20.74■□□□□ 0.91
CD4-212ENST00000544344 CNTROBQ8N137 903 aa20.74■□□□□ 0.91
CD4-212ENST00000544344 CCER1Q8TC90 406 aaPredicted RBP20.74■□□□□ 0.91
CD4-212ENST00000544344 CLEC11AQ9Y240 323 aa20.74■□□□□ 0.91
CD4-212ENST00000544344 LBX1P52954 281 aa20.73■□□□□ 0.91
CD4-212ENST00000544344 DCTN1Q14203 1278 aa20.73■□□□□ 0.91
CD4-212ENST00000544344 PNMA8AQ86V59 439 aaPredicted RBP20.73■□□□□ 0.91
CD4-212ENST00000544344 GPC2Q8N158 579 aa20.73■□□□□ 0.91
CD4-212ENST00000544344 AIDAQ96BJ3 306 aa20.73■□□□□ 0.91
CD4-212ENST00000544344 ABCC12Q96J65 1359 aa20.72■□□□□ 0.91
CD4-212ENST00000544344 LAMB4A4D0S4 1761 aa20.72■□□□□ 0.91
CD4-212ENST00000544344 ALDH1B1P30837 517 aa20.72■□□□□ 0.91
CD4-212ENST00000544344 CRY2Q49AN0 593 aa20.72■□□□□ 0.91
CD4-212ENST00000544344 HSPA8P11142 646 aaKnown RBP20.71■□□□□ 0.91
CD4-212ENST00000544344 DEFB115Q30KQ5 88 aa20.71■□□□□ 0.91
CD4-212ENST00000544344 PSMD1Q99460 953 aa20.71■□□□□ 0.91
CD4-212ENST00000544344 NUP98P52948 1817 aa20.71■□□□□ 0.91
CD4-212ENST00000544344 THSD7BQ9C0I4 1608 aa20.69■□□□□ 0.9
CD4-212ENST00000544344 RTF1Q92541 710 aaKnown RBP20.69■□□□□ 0.9
CD4-212ENST00000544344 WDR33Q9C0J8 1336 aaKnown RBP20.69■□□□□ 0.9
CD4-212ENST00000544344 SLC51AQ86UW1 340 aa20.68■□□□□ 0.9
CD4-212ENST00000544344 NUTM1Q86Y26 1132 aa20.68■□□□□ 0.9
CD4-212ENST00000544344 CFAP53Q96M91 514 aa20.68■□□□□ 0.9
CD4-212ENST00000544344 HTATSF1O43719 755 aaKnown RBP20.67■□□□□ 0.9
CD4-212ENST00000544344 U2AF1L5P0DN76 240 aaPredicted RBP20.67■□□□□ 0.9
CD4-212ENST00000544344 U2AF1Q01081 240 aaKnown RBP eCLIP20.67■□□□□ 0.9
CD4-212ENST00000544344 FMR1Q06787 632 aaKnown RBP eCLIP20.67■□□□□ 0.9
CD4-212ENST00000544344 DDX21Q9NR30 783 aaKnown RBP eCLIP20.67■□□□□ 0.9
CD4-212ENST00000544344 MIS18AQ9NYP9 233 aa20.67■□□□□ 0.9
CD4-212ENST00000544344 KDM3BQ7LBC6 1761 aa20.67■□□□□ 0.9
CD4-212ENST00000544344 GTF2E1P29083 439 aaPredicted RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms