RNA–Protein interactions for RNA: ENST00000544004.1

AP000439.1-201, humanhuman

TSL 4 BASIC

Gene AP000439.1, Length 581 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000439.1-201ENST00000544004 HACL1Q9UJ83 578 aa15.45■□□□□ 0.06
AP000439.1-201ENST00000544004 TBC1D2BQ9UPU7 963 aa15.45■□□□□ 0.06
AP000439.1-201ENST00000544004 EPHX2P34913 555 aa15.44■□□□□ 0.06
AP000439.1-201ENST00000544004 IL13P35225 146 aa15.44■□□□□ 0.06
AP000439.1-201ENST00000544004 MAP1SQ66K74 1059 aaPredicted RBP15.44■□□□□ 0.06
AP000439.1-201ENST00000544004 CNBD1Q8NA66 436 aa15.44■□□□□ 0.06
AP000439.1-201ENST00000544004 MASTLQ96GX5 879 aa15.44■□□□□ 0.06
AP000439.1-201ENST00000544004 ABT1Q9ULW3 272 aaKnown RBP15.44■□□□□ 0.06
AP000439.1-201ENST00000544004 ZNF330Q9Y3S2 320 aaPredicted RBP15.44■□□□□ 0.06
AP000439.1-201ENST00000544004 ZNF541Q9H0D2 1346 aa15.43■□□□□ 0.06
AP000439.1-201ENST00000544004 ST5P78524 1137 aa15.43■□□□□ 0.06
AP000439.1-201ENST00000544004 SETDB2Q96T68 719 aa15.43■□□□□ 0.06
AP000439.1-201ENST00000544004 CCDC93Q567U6 631 aa15.42■□□□□ 0.06
AP000439.1-201ENST00000544004 PNMA8AQ86V59 439 aaPredicted RBP15.42■□□□□ 0.06
AP000439.1-201ENST00000544004 MORC1Q86VD1 984 aa15.42■□□□□ 0.06
AP000439.1-201ENST00000544004 TTC5Q8N0Z6 440 aa15.42■□□□□ 0.06
AP000439.1-201ENST00000544004 RNF123Q5XPI4 1314 aa15.42■□□□□ 0.06
AP000439.1-201ENST00000544004 C7orf43Q8WVR3 580 aa15.41■□□□□ 0.06
AP000439.1-201ENST00000544004 BEGAINQ9BUH8 593 aa15.41■□□□□ 0.06
AP000439.1-201ENST00000544004 PANK3Q9H999 370 aa15.41■□□□□ 0.06
AP000439.1-201ENST00000544004 ZNF277Q9NRM2 450 aaPredicted RBP15.41■□□□□ 0.06
AP000439.1-201ENST00000544004 THSD7BQ9C0I4 1608 aa15.41■□□□□ 0.06
AP000439.1-201ENST00000544004 IL6STP40189 918 aaPredicted RBP15.4■□□□□ 0.06
AP000439.1-201ENST00000544004 FKBP4Q02790 459 aaKnown RBP eCLIP15.4■□□□□ 0.06
AP000439.1-201ENST00000544004 HMOX1P09601 288 aa15.39■□□□□ 0.05
AP000439.1-201ENST00000544004 MTHFSDQ2M296 383 aaKnown RBP15.39■□□□□ 0.05
AP000439.1-201ENST00000544004 PAXIP1Q6ZW49 1069 aaPredicted RBP15.39■□□□□ 0.05
AP000439.1-201ENST00000544004 ZNF496Q96IT1 587 aaPredicted RBP15.39■□□□□ 0.05
AP000439.1-201ENST00000544004 CAPNS2Q96L46 248 aa15.39■□□□□ 0.05
AP000439.1-201ENST00000544004 DDX21Q9NR30 783 aaKnown RBP eCLIP15.39■□□□□ 0.05
AP000439.1-201ENST00000544004 BCORQ6W2J9 1755 aa15.39■□□□□ 0.05
AP000439.1-201ENST00000544004 HEG1Q9ULI3 1381 aa15.38■□□□□ 0.05
AP000439.1-201ENST00000544004 CAMTA2O94983 1202 aa15.38■□□□□ 0.05
AP000439.1-201ENST00000544004 ECE1P42892 770 aa15.38■□□□□ 0.05
AP000439.1-201ENST00000544004 GRM1Q13255 1194 aa15.38■□□□□ 0.05
AP000439.1-201ENST00000544004 NPM2Q86SE8 214 aaKnown RBP15.38■□□□□ 0.05
AP000439.1-201ENST00000544004 CFAP44Q96MT7 982 aa15.38■□□□□ 0.05
AP000439.1-201ENST00000544004 GPR101Q96P66 508 aaPredicted RBP15.38■□□□□ 0.05
AP000439.1-201ENST00000544004 TEX13AQ9BXU3 409 aaPredicted RBP15.38■□□□□ 0.05
AP000439.1-201ENST00000544004 FZD9O00144 591 aa15.37■□□□□ 0.05
AP000439.1-201ENST00000544004 A1BGP04217 495 aa15.37■□□□□ 0.05
AP000439.1-201ENST00000544004 NPR1P16066 1061 aa15.37■□□□□ 0.05
AP000439.1-201ENST00000544004 FMR1Q06787 632 aaKnown RBP eCLIP15.37■□□□□ 0.05
AP000439.1-201ENST00000544004 CYP4F22Q6NT55 531 aa15.37■□□□□ 0.05
AP000439.1-201ENST00000544004 OLFM4Q6UX06 510 aa15.37■□□□□ 0.05
AP000439.1-201ENST00000544004 TSKSQ9UJT2 592 aa15.37■□□□□ 0.05
AP000439.1-201ENST00000544004 TRPM7Q96QT4 1865 aa15.36■□□□□ 0.05
AP000439.1-201ENST00000544004 IARSP41252 1262 aaKnown RBP15.36■□□□□ 0.05
AP000439.1-201ENST00000544004 ZNF790Q6PG37 636 aa15.36■□□□□ 0.05
AP000439.1-201ENST00000544004 RTKN2Q8IZC4 609 aa15.36■□□□□ 0.05
AP000439.1-201ENST00000544004 GPC2Q8N158 579 aa15.36■□□□□ 0.05
AP000439.1-201ENST00000544004 NBPF5PQ86XG9 351 aaPredicted RBP15.35■□□□□ 0.05
AP000439.1-201ENST00000544004 DZIP3Q86Y13 1208 aaKnown RBP15.35■□□□□ 0.05
AP000439.1-201ENST00000544004 SYNE4Q8N205 404 aa15.35■□□□□ 0.05
AP000439.1-201ENST00000544004 LTBP1Q14766 1721 aa15.34■□□□□ 0.05
AP000439.1-201ENST00000544004 SIPA1L3O60292 1781 aaPredicted RBP15.34■□□□□ 0.05
AP000439.1-201ENST00000544004 CASP8AP2Q9UKL3 1982 aa15.33■□□□□ 0.05
AP000439.1-201ENST00000544004 KLRG2A4D1S0 409 aaPredicted RBP15.33■□□□□ 0.04
AP000439.1-201ENST00000544004 TEFQ10587 303 aa15.33■□□□□ 0.04
AP000439.1-201ENST00000544004 JDP2Q8WYK2 163 aa15.33■□□□□ 0.04
AP000439.1-201ENST00000544004 MCOLN1Q9GZU1 580 aa15.33■□□□□ 0.04
AP000439.1-201ENST00000544004 GJA3Q9Y6H8 435 aa15.33■□□□□ 0.04
AP000439.1-201ENST00000544004 TNRC18O15417 2968 aaPredicted RBP15.33■□□□□ 0.04
AP000439.1-201ENST00000544004 AOC2O75106 756 aa15.32■□□□□ 0.04
AP000439.1-201ENST00000544004 LMOD1P29536 600 aaPredicted RBP15.32■□□□□ 0.04
AP000439.1-201ENST00000544004 CST9Q5W186 159 aa15.32■□□□□ 0.04
AP000439.1-201ENST00000544004 FMNL2Q96PY5 1086 aa15.32■□□□□ 0.04
AP000439.1-201ENST00000544004 TRAF5O00463 557 aa15.31■□□□□ 0.04
AP000439.1-201ENST00000544004 ALDH1B1P30837 517 aa15.31■□□□□ 0.04
AP000439.1-201ENST00000544004 MAP2K2P36507 400 aa15.31■□□□□ 0.04
AP000439.1-201ENST00000544004 PIP4K2AP48426 406 aaPredicted RBP15.31■□□□□ 0.04
AP000439.1-201ENST00000544004 EIF6P56537 245 aaKnown RBP15.31■□□□□ 0.04
AP000439.1-201ENST00000544004 CLEC4GQ6UXB4 293 aa15.31■□□□□ 0.04
AP000439.1-201ENST00000544004 IL17REQ8NFR9 667 aa15.31■□□□□ 0.04
AP000439.1-201ENST00000544004 TLL2Q9Y6L7 1015 aa15.31■□□□□ 0.04
AP000439.1-201ENST00000544004 COL4A5P29400 1685 aa15.3■□□□□ 0.04
AP000439.1-201ENST00000544004 EPS15P42566 896 aa15.3■□□□□ 0.04
AP000439.1-201ENST00000544004 SCNN1DP51172 638 aa15.3■□□□□ 0.04
AP000439.1-201ENST00000544004 TPTE2Q6XPS3 522 aa15.3■□□□□ 0.04
AP000439.1-201ENST00000544004 FAM177BA6PVY3 158 aa15.29■□□□□ 0.04
AP000439.1-201ENST00000544004 DGKZQ13574 1117 aa15.29■□□□□ 0.04
AP000439.1-201ENST00000544004 PSMD1Q99460 953 aa15.29■□□□□ 0.04
AP000439.1-201ENST00000544004 ZNF652Q9Y2D9 606 aa15.29■□□□□ 0.04
AP000439.1-201ENST00000544004 KNSTRNQ9Y448 316 aa15.29■□□□□ 0.04
AP000439.1-201ENST00000544004 SNED1Q8TER0 1413 aa15.28■□□□□ 0.04
AP000439.1-201ENST00000544004 GNAT3A8MTJ3 354 aa15.28■□□□□ 0.04
AP000439.1-201ENST00000544004 KCNQ3O43525 872 aa15.28■□□□□ 0.04
AP000439.1-201ENST00000544004 CA12O43570 354 aa15.28■□□□□ 0.04
AP000439.1-201ENST00000544004 DIAPH1O60610 1272 aaKnown RBP15.28■□□□□ 0.04
AP000439.1-201ENST00000544004 USP50Q70EL3 339 aaPredicted RBP15.28■□□□□ 0.04
AP000439.1-201ENST00000544004 NIP7Q9Y221 180 aaKnown RBP eCLIP15.28■□□□□ 0.04
AP000439.1-201ENST00000544004 USP16Q9Y5T5 823 aa15.28■□□□□ 0.04
AP000439.1-201ENST00000544004 SAPCD2Q86UD0 394 aa15.26■□□□□ 0.03
AP000439.1-201ENST00000544004 PRAMEF22A3QJZ6 481 aa15.25■□□□□ 0.03
AP000439.1-201ENST00000544004 BTBD11A6QL63 1104 aa15.25■□□□□ 0.03
AP000439.1-201ENST00000544004 GTF2E1P29083 439 aaPredicted RBP15.25■□□□□ 0.03
AP000439.1-201ENST00000544004 BRPF1P55201 1214 aaPredicted RBP15.25■□□□□ 0.03
AP000439.1-201ENST00000544004 LARGE2Q8N3Y3 721 aa15.25■□□□□ 0.03
AP000439.1-201ENST00000544004 GAS2L2Q8NHY3 880 aa15.25■□□□□ 0.03
AP000439.1-201ENST00000544004 CELF2O95319 508 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms