RNA–Protein interactions for RNA: ENST00000543835.5

C1R-211, Transcript of complement C1r, humanhuman

TSL 4

Gene C1R, Length 521 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1R-211ENST00000543835 ANKRD31Q8N7Z5 1873 aa12.4□□□□□ -0.42
C1R-211ENST00000543835 COL11A2P13942 1736 aaPredicted RBP12.4□□□□□ -0.43
C1R-211ENST00000543835 TIAM2Q8IVF5 1701 aa12.4□□□□□ -0.43
C1R-211ENST00000543835 NPHP1O15259 732 aa12.39□□□□□ -0.43
C1R-211ENST00000543835 SNRPA1P09661 255 aaKnown RBP12.39□□□□□ -0.43
C1R-211ENST00000543835 NBPF5PQ86XG9 351 aaPredicted RBP12.39□□□□□ -0.43
C1R-211ENST00000543835 C7orf43Q8WVR3 580 aa12.39□□□□□ -0.43
C1R-211ENST00000543835 CFAP53Q96M91 514 aa12.39□□□□□ -0.43
C1R-211ENST00000543835 SIPA1L3O60292 1781 aaPredicted RBP12.38□□□□□ -0.43
C1R-211ENST00000543835 KLRG2A4D1S0 409 aaPredicted RBP12.38□□□□□ -0.43
C1R-211ENST00000543835 NBPF26B4DH59 902 aa12.38□□□□□ -0.43
C1R-211ENST00000543835 RGL2O15211 777 aa12.38□□□□□ -0.43
C1R-211ENST00000543835 DDNO94850 711 aaPredicted RBP12.38□□□□□ -0.43
C1R-211ENST00000543835 POTEIP0CG38 1075 aa12.38□□□□□ -0.43
C1R-211ENST00000543835 POTEJP0CG39 1038 aa12.38□□□□□ -0.43
C1R-211ENST00000543835 HSPA1AP0DMV8 641 aaKnown RBP12.38□□□□□ -0.43
C1R-211ENST00000543835 HSPA1BP0DMV9 641 aaKnown RBP12.38□□□□□ -0.43
C1R-211ENST00000543835 CHADLQ6NUI6 762 aa12.38□□□□□ -0.43
C1R-211ENST00000543835 NBPF10Q6P3W6 841 aaKnown RBP12.38□□□□□ -0.43
C1R-211ENST00000543835 MCM10Q7L590 875 aa12.38□□□□□ -0.43
C1R-211ENST00000543835 TNS4Q8IZW8 715 aa12.38□□□□□ -0.43
C1R-211ENST00000543835 NBPF15Q8N660 670 aa12.38□□□□□ -0.43
C1R-211ENST00000543835 NUDCQ9Y266 331 aa12.38□□□□□ -0.43
C1R-211ENST00000543835 RTF1Q92541 710 aaKnown RBP12.37□□□□□ -0.43
C1R-211ENST00000543835 L3MBTL3Q96JM7 780 aaPredicted RBP12.37□□□□□ -0.43
C1R-211ENST00000543835 CREBZFQ9NS37 354 aa12.37□□□□□ -0.43
C1R-211ENST00000543835 ZNF652Q9Y2D9 606 aa12.37□□□□□ -0.43
C1R-211ENST00000543835 HTATSF1O43719 755 aaKnown RBP12.36□□□□□ -0.43
C1R-211ENST00000543835 U2AF1L5P0DN76 240 aaPredicted RBP12.36□□□□□ -0.43
C1R-211ENST00000543835 NPR1P16066 1061 aa12.36□□□□□ -0.43
C1R-211ENST00000543835 PPP2R1AP30153 589 aa12.36□□□□□ -0.43
C1R-211ENST00000543835 U2AF1Q01081 240 aaKnown RBP eCLIP12.36□□□□□ -0.43
C1R-211ENST00000543835 CCDC93Q567U6 631 aa12.36□□□□□ -0.43
C1R-211ENST00000543835 IQCA1LA6NCM1 817 aa12.35□□□□□ -0.43
C1R-211ENST00000543835 DCTN1Q14203 1278 aa12.35□□□□□ -0.43
C1R-211ENST00000543835 TPTE2Q6XPS3 522 aa12.35□□□□□ -0.43
C1R-211ENST00000543835 NIP7Q9Y221 180 aaKnown RBP eCLIP12.35□□□□□ -0.43
C1R-211ENST00000543835 PASKQ96RG2 1323 aa12.35□□□□□ -0.43
C1R-211ENST00000543835 VIRMAQ69YN4 1812 aaKnown RBP12.34□□□□□ -0.43
C1R-211ENST00000543835 FER1L6Q2WGJ9 1857 aa12.34□□□□□ -0.43
C1R-211ENST00000543835 BCORQ6W2J9 1755 aa12.34□□□□□ -0.43
C1R-211ENST00000543835 FKBP4Q02790 459 aaKnown RBP eCLIP12.34□□□□□ -0.43
C1R-211ENST00000543835 OLFM4Q6UX06 510 aa12.34□□□□□ -0.43
C1R-211ENST00000543835 LDHDQ86WU2 507 aa12.34□□□□□ -0.43
C1R-211ENST00000543835 TAF1DQ9H5J8 278 aaPredicted RBP12.34□□□□□ -0.43
C1R-211ENST00000543835 MKRN1Q9UHC7 482 aaKnown RBP12.34□□□□□ -0.43
C1R-211ENST00000543835 ZNF541Q9H0D2 1346 aa12.34□□□□□ -0.43
C1R-211ENST00000543835 SLX4Q8IY92 1834 aa12.33□□□□□ -0.44
C1R-211ENST00000543835 CAPN15O75808 1086 aa12.33□□□□□ -0.44
C1R-211ENST00000543835 HLFQ16534 295 aa12.33□□□□□ -0.44
C1R-211ENST00000543835 RTKN2Q8IZC4 609 aa12.33□□□□□ -0.44
C1R-211ENST00000543835 ZNF277Q9NRM2 450 aaPredicted RBP12.33□□□□□ -0.44
C1R-211ENST00000543835 CNTNAP1P78357 1384 aa12.32□□□□□ -0.44
C1R-211ENST00000543835 SNED1Q8TER0 1413 aa12.32□□□□□ -0.44
C1R-211ENST00000543835 ITGBL1O95965 494 aaPredicted RBP12.32□□□□□ -0.44
C1R-211ENST00000543835 TAF7Q15545 349 aaPredicted RBP12.32□□□□□ -0.44
C1R-211ENST00000543835 CRY2Q49AN0 593 aa12.32□□□□□ -0.44
C1R-211ENST00000543835 MIS18AQ9NYP9 233 aa12.32□□□□□ -0.44
C1R-211ENST00000543835 FAM177BA6PVY3 158 aa12.31□□□□□ -0.44
C1R-211ENST00000543835 ALDH1B1P30837 517 aa12.31□□□□□ -0.44
C1R-211ENST00000543835 ABCC12Q96J65 1359 aa12.3□□□□□ -0.44
C1R-211ENST00000543835 ERVV-1B6SEH8 477 aa12.3□□□□□ -0.44
C1R-211ENST00000543835 FZD9O00144 591 aa12.3□□□□□ -0.44
C1R-211ENST00000543835 IARSP41252 1262 aaKnown RBP12.3□□□□□ -0.44
C1R-211ENST00000543835 PSMD1Q99460 953 aa12.3□□□□□ -0.44
C1R-211ENST00000543835 HACL1Q9UJ83 578 aa12.3□□□□□ -0.44
C1R-211ENST00000543835 ARFGEF2Q9Y6D5 1785 aa12.29□□□□□ -0.44
C1R-211ENST00000543835 GTF2E1P29083 439 aaPredicted RBP12.29□□□□□ -0.44
C1R-211ENST00000543835 EPHX2P34913 555 aa12.29□□□□□ -0.44
C1R-211ENST00000543835 EAPPQ56P03 285 aaPredicted RBP12.29□□□□□ -0.44
C1R-211ENST00000543835 SYNE4Q8N205 404 aa12.29□□□□□ -0.44
C1R-211ENST00000543835 PNISRQ8TF01 805 aaKnown RBP12.29□□□□□ -0.44
C1R-211ENST00000543835 TMEM88BA6NKF7 163 aa12.28□□□□□ -0.44
C1R-211ENST00000543835 FOXN1O15353 648 aa12.28□□□□□ -0.44
C1R-211ENST00000543835 HOXA10P31260 410 aaPredicted RBP12.28□□□□□ -0.44
C1R-211ENST00000543835 EIF4A1P60842 406 aaKnown RBP12.28□□□□□ -0.44
C1R-211ENST00000543835 TTLL7Q6ZT98 887 aa12.28□□□□□ -0.44
C1R-211ENST00000543835 PNMA8AQ86V59 439 aaPredicted RBP12.28□□□□□ -0.44
C1R-211ENST00000543835 NUTM1Q86Y26 1132 aa12.28□□□□□ -0.44
C1R-211ENST00000543835 GPC2Q8N158 579 aa12.28□□□□□ -0.44
C1R-211ENST00000543835 NYXQ9GZU5 481 aa12.28□□□□□ -0.44
C1R-211ENST00000543835 DICER1Q9UPY3 1922 aaKnown RBP12.28□□□□□ -0.44
C1R-211ENST00000543835 RNF123Q5XPI4 1314 aa12.28□□□□□ -0.44
C1R-211ENST00000543835 MAP3K15Q6ZN16 1313 aa12.28□□□□□ -0.44
C1R-211ENST00000543835 IBTKQ9P2D0 1353 aaPredicted RBP12.28□□□□□ -0.44
C1R-211ENST00000543835 VEGFBP49765 207 aa12.27□□□□□ -0.45
C1R-211ENST00000543835 CC2D2BQ6DHV5 1058 aa12.27□□□□□ -0.45
C1R-211ENST00000543835 NGEFQ8N5V2 710 aa12.27□□□□□ -0.45
C1R-211ENST00000543835 PLEKHF1Q96S99 279 aa12.27□□□□□ -0.45
C1R-211ENST00000543835 UBN2Q6ZU65 1347 aa12.27□□□□□ -0.45
C1R-211ENST00000543835 CCDC88AQ3V6T2 1871 aa12.27□□□□□ -0.45
C1R-211ENST00000543835 RIC1Q4ADV7 1423 aa12.27□□□□□ -0.45
C1R-211ENST00000543835 KIF6Q6ZMV9 814 aa12.26□□□□□ -0.45
C1R-211ENST00000543835 CNTROBQ8N137 903 aa12.26□□□□□ -0.45
C1R-211ENST00000543835 JDP2Q8WYK2 163 aa12.26□□□□□ -0.45
C1R-211ENST00000543835 CLEC11AQ9Y240 323 aa12.26□□□□□ -0.45
C1R-211ENST00000543835 RRP7AQ9Y3A4 280 aaKnown RBP12.26□□□□□ -0.45
C1R-211ENST00000543835 COL4A5P29400 1685 aa12.26□□□□□ -0.45
C1R-211ENST00000543835 ADAMTSL1Q8N6G6 1762 aa12.25□□□□□ -0.45
C1R-211ENST00000543835 RASSF10A6NK89 507 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms