RNA–Protein interactions for RNA: ENST00000543755.1

CD4-211, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 494 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-211ENST00000543755 CARD11Q9BXL7 1154 aa12.18□□□□□ -0.46
CD4-211ENST00000543755 ZNF277Q9NRM2 450 aaPredicted RBP12.18□□□□□ -0.46
CD4-211ENST00000543755 GJA3Q9Y6H8 435 aa12.18□□□□□ -0.46
CD4-211ENST00000543755 TRPA1O75762 1119 aa12.17□□□□□ -0.46
CD4-211ENST00000543755 FKBP4Q02790 459 aaKnown RBP eCLIP12.17□□□□□ -0.46
CD4-211ENST00000543755 AKAP4Q5JQC9 854 aa12.17□□□□□ -0.46
CD4-211ENST00000543755 JDP2Q8WYK2 163 aa12.17□□□□□ -0.46
CD4-211ENST00000543755 ADAMTS7Q9UKP4 1686 aa12.16□□□□□ -0.46
CD4-211ENST00000543755 ST20-MTHFSA0A0A6YYL1 179 aa12.16□□□□□ -0.46
CD4-211ENST00000543755 MTHFSP49914 203 aa12.16□□□□□ -0.46
CD4-211ENST00000543755 EIF6P56537 245 aaKnown RBP12.16□□□□□ -0.46
CD4-211ENST00000543755 PLEKHO1Q53GL0 409 aaPredicted RBP12.16□□□□□ -0.46
CD4-211ENST00000543755 MASTLQ96GX5 879 aa12.16□□□□□ -0.46
CD4-211ENST00000543755 SAGE1Q9NXZ1 904 aa12.16□□□□□ -0.46
CD4-211ENST00000543755 COLQQ9Y215 455 aaPredicted RBP12.16□□□□□ -0.46
CD4-211ENST00000543755 EMILIN1Q9Y6C2 1016 aa12.16□□□□□ -0.46
CD4-211ENST00000543755 WASHC2AQ641Q2 1341 aa12.15□□□□□ -0.46
CD4-211ENST00000543755 SLC24A1O60721 1099 aa12.15□□□□□ -0.46
CD4-211ENST00000543755 ST5P78524 1137 aa12.15□□□□□ -0.46
CD4-211ENST00000543755 C1orf141Q5JVX7 400 aa12.15□□□□□ -0.46
CD4-211ENST00000543755 USP50Q70EL3 339 aaPredicted RBP12.15□□□□□ -0.46
CD4-211ENST00000543755 DNAJC10Q8IXB1 793 aa12.15□□□□□ -0.46
CD4-211ENST00000543755 RTKN2Q8IZC4 609 aa12.15□□□□□ -0.46
CD4-211ENST00000543755 SYNE4Q8N205 404 aa12.15□□□□□ -0.46
CD4-211ENST00000543755 NFATC2IPQ8NCF5 419 aa12.15□□□□□ -0.46
CD4-211ENST00000543755 PITPNM2Q9BZ72 1349 aa12.14□□□□□ -0.47
CD4-211ENST00000543755 A0A087WZG4 1122 aa12.14□□□□□ -0.47
CD4-211ENST00000543755 FZD9O00144 591 aa12.14□□□□□ -0.47
CD4-211ENST00000543755 EPS15P42566 896 aa12.14□□□□□ -0.47
CD4-211ENST00000543755 PRR5LQ6MZQ0 368 aa12.14□□□□□ -0.47
CD4-211ENST00000543755 ZNF530Q6P9A1 599 aaPredicted RBP12.14□□□□□ -0.47
CD4-211ENST00000543755 CNBD1Q8NA66 436 aa12.14□□□□□ -0.47
CD4-211ENST00000543755 BCL2L12Q9HB09 334 aa12.14□□□□□ -0.47
CD4-211ENST00000543755 RNF186Q9NXI6 227 aa12.14□□□□□ -0.47
CD4-211ENST00000543755 TRPM7Q96QT4 1865 aa12.13□□□□□ -0.47
CD4-211ENST00000543755 SRGNP10124 158 aa12.13□□□□□ -0.47
CD4-211ENST00000543755 IARSP41252 1262 aaKnown RBP12.13□□□□□ -0.47
CD4-211ENST00000543755 AMOTQ4VCS5 1084 aa12.13□□□□□ -0.47
CD4-211ENST00000543755 HDAC9Q9UKV0 1011 aa12.13□□□□□ -0.47
CD4-211ENST00000543755 TJP1Q07157 1748 aa12.12□□□□□ -0.47
CD4-211ENST00000543755 CYP19A1P11511 503 aaPredicted RBP12.12□□□□□ -0.47
CD4-211ENST00000543755 PKN2Q16513 984 aaKnown RBP12.12□□□□□ -0.47
CD4-211ENST00000543755 NPM2Q86SE8 214 aaKnown RBP12.12□□□□□ -0.47
CD4-211ENST00000543755 GLIS2Q9BZE0 524 aaPredicted RBP12.12□□□□□ -0.47
CD4-211ENST00000543755 ZBTB1Q9Y2K1 713 aa12.12□□□□□ -0.47
CD4-211ENST00000543755 SLX4Q8IY92 1834 aa12.11□□□□□ -0.47
CD4-211ENST00000543755 CANXP27824 592 aaKnown RBP12.11□□□□□ -0.47
CD4-211ENST00000543755 HUNKP57058 714 aa12.11□□□□□ -0.47
CD4-211ENST00000543755 KIF23Q02241 960 aaPredicted RBP12.11□□□□□ -0.47
CD4-211ENST00000543755 TBC1D9BQ66K14 1250 aa12.11□□□□□ -0.47
CD4-211ENST00000543755 SETDB2Q96T68 719 aa12.11□□□□□ -0.47
CD4-211ENST00000543755 COL11A2P13942 1736 aaPredicted RBP12.1□□□□□ -0.47
CD4-211ENST00000543755 ANKRD31Q8N7Z5 1873 aa12.1□□□□□ -0.47
CD4-211ENST00000543755 A0A0C4DFX4 3053 aa12.09□□□□□ -0.47
CD4-211ENST00000543755 CACNA1SQ13698 1873 aa12.09□□□□□ -0.47
CD4-211ENST00000543755 NPR1P16066 1061 aa12.09□□□□□ -0.47
CD4-211ENST00000543755 SCNN1DP51172 638 aa12.09□□□□□ -0.47
CD4-211ENST00000543755 OLFM4Q6UX06 510 aa12.09□□□□□ -0.47
CD4-211ENST00000543755 C7orf43Q8WVR3 580 aa12.09□□□□□ -0.47
CD4-211ENST00000543755 ANKRD26Q9UPS8 1709 aa12.08□□□□□ -0.47
CD4-211ENST00000543755 MNX1P50219 401 aaPredicted RBP12.08□□□□□ -0.48
CD4-211ENST00000543755 ADARB2Q9NS39 739 aaKnown RBP12.08□□□□□ -0.48
CD4-211ENST00000543755 ZNF330Q9Y3S2 320 aaPredicted RBP12.08□□□□□ -0.48
CD4-211ENST00000543755 STARD3NLO95772 234 aa12.07□□□□□ -0.48
CD4-211ENST00000543755 RGMBQ6NW40 437 aa12.07□□□□□ -0.48
CD4-211ENST00000543755 CCDC102AQ96A19 550 aa12.07□□□□□ -0.48
CD4-211ENST00000543755 ARFGEF2Q9Y6D5 1785 aa12.07□□□□□ -0.48
CD4-211ENST00000543755 KIF20BQ96Q89 1820 aa12.07□□□□□ -0.48
CD4-211ENST00000543755 SZT2Q5T011 3432 aa12.07□□□□□ -0.48
CD4-211ENST00000543755 FAM155AB1AL88 458 aaPredicted RBP12.06□□□□□ -0.48
CD4-211ENST00000543755 ALDH1B1P30837 517 aa12.06□□□□□ -0.48
CD4-211ENST00000543755 FBXO46Q6PJ61 603 aaPredicted RBP12.06□□□□□ -0.48
CD4-211ENST00000543755 POTEFA5A3E0 1075 aa12.05□□□□□ -0.48
CD4-211ENST00000543755 ZNF157P51786 506 aaPredicted RBP12.05□□□□□ -0.48
CD4-211ENST00000543755 NEUROD1Q13562 356 aa12.05□□□□□ -0.48
CD4-211ENST00000543755 EIF4A2Q14240 407 aaKnown RBP12.05□□□□□ -0.48
CD4-211ENST00000543755 CDC37L1Q7L3B6 337 aa12.05□□□□□ -0.48
CD4-211ENST00000543755 VSIG10Q8N0Z9 540 aa12.05□□□□□ -0.48
CD4-211ENST00000543755 LARGE2Q8N3Y3 721 aa12.05□□□□□ -0.48
CD4-211ENST00000543755 PSMD1Q99460 953 aa12.05□□□□□ -0.48
CD4-211ENST00000543755 EIF5P55010 431 aaKnown RBP12.04□□□□□ -0.48
CD4-211ENST00000543755 NBPF5PQ86XG9 351 aaPredicted RBP12.04□□□□□ -0.48
CD4-211ENST00000543755 ZNF296Q8WUU4 475 aaPredicted RBP12.04□□□□□ -0.48
CD4-211ENST00000543755 TBC1D2BQ9UPU7 963 aa12.04□□□□□ -0.48
CD4-211ENST00000543755 MKI67P46013 3256 aaKnown RBP12.04□□□□□ -0.48
CD4-211ENST00000543755 CUL9Q8IWT3 2517 aa12.03□□□□□ -0.48
CD4-211ENST00000543755 SCN11AQ9UI33 1791 aa12.03□□□□□ -0.48
CD4-211ENST00000543755 CC2D2BQ6DHV5 1058 aa12.03□□□□□ -0.48
CD4-211ENST00000543755 NIM1KQ8IY84 436 aa12.03□□□□□ -0.48
CD4-211ENST00000543755 REM2Q8IYK8 340 aaPredicted RBP12.03□□□□□ -0.48
CD4-211ENST00000543755 C2orf69Q8N8R5 385 aa12.03□□□□□ -0.48
CD4-211ENST00000543755 ZC3H15Q8WU90 426 aaKnown RBP12.03□□□□□ -0.48
CD4-211ENST00000543755 CSRNP1Q96S65 589 aa12.03□□□□□ -0.48
CD4-211ENST00000543755 SLC52A2Q9HAB3 445 aa12.03□□□□□ -0.48
CD4-211ENST00000543755 GPRC5DQ9NZD1 345 aa12.03□□□□□ -0.48
CD4-211ENST00000543755 SLC39A6Q13433 755 aa12.02□□□□□ -0.49
CD4-211ENST00000543755 GRIPAP1Q4V328 841 aa12.02□□□□□ -0.49
CD4-211ENST00000543755 CHRDL2Q6WN34 429 aa12.02□□□□□ -0.49
CD4-211ENST00000543755 BCORQ6W2J9 1755 aa12.01□□□□□ -0.49
CD4-211ENST00000543755 DLK2Q6UY11 383 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms