RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 MTMR6Q9Y217 621 aa5.9□□□□□ -1.47
LMO3-229ENST00000543721 ATP7BP35670 1465 aa5.9□□□□□ -1.47
LMO3-229ENST00000543721 IL13P35225 146 aa5.89□□□□□ -1.47
LMO3-229ENST00000543721 TNNT3P45378 269 aaPredicted RBP5.89□□□□□ -1.47
LMO3-229ENST00000543721 KCNJ6P48051 423 aa5.89□□□□□ -1.47
LMO3-229ENST00000543721 ZNF165P49910 485 aa5.89□□□□□ -1.47
LMO3-229ENST00000543721 ATP8B2P98198 1209 aa5.89□□□□□ -1.47
LMO3-229ENST00000543721 KMT5BQ4FZB7 885 aa5.89□□□□□ -1.47
LMO3-229ENST00000543721 NYAP1Q6ZVC0 841 aa5.89□□□□□ -1.47
LMO3-229ENST00000543721 ZNF592Q92610 1267 aa5.89□□□□□ -1.47
LMO3-229ENST00000543721 PHACTR3Q96KR7 559 aa5.89□□□□□ -1.47
LMO3-229ENST00000543721 CLSTN2Q9H4D0 955 aa5.89□□□□□ -1.47
LMO3-229ENST00000543721 ADGRL3Q9HAR2 1447 aa5.89□□□□□ -1.47
LMO3-229ENST00000543721 ABCC3O15438 1527 aa5.89□□□□□ -1.47
LMO3-229ENST00000543721 SOS1Q07889 1333 aaPredicted RBP5.89□□□□□ -1.47
LMO3-229ENST00000543721 CHL1O00533 1208 aa5.89□□□□□ -1.47
LMO3-229ENST00000543721 AK2P54819 239 aa5.89□□□□□ -1.47
LMO3-229ENST00000543721 DNM1Q05193 864 aaKnown RBP5.89□□□□□ -1.47
LMO3-229ENST00000543721 ANKRD1Q15327 319 aa5.89□□□□□ -1.47
LMO3-229ENST00000543721 ANO6Q4KMQ2 910 aa5.89□□□□□ -1.47
LMO3-229ENST00000543721 LRRC8AQ8IWT6 810 aa5.89□□□□□ -1.47
LMO3-229ENST00000543721 CNTROBQ8N137 903 aa5.89□□□□□ -1.47
LMO3-229ENST00000543721 IMPACTQ9P2X3 320 aa5.89□□□□□ -1.47
LMO3-229ENST00000543721 HECW2Q9P2P5 1572 aa5.89□□□□□ -1.47
LMO3-229ENST00000543721 SGSM2O43147 1006 aa5.89□□□□□ -1.47
LMO3-229ENST00000543721 GJB2P29033 226 aa5.89□□□□□ -1.47
LMO3-229ENST00000543721 THUMPD2Q9BTF0 503 aaKnown RBP5.89□□□□□ -1.47
LMO3-229ENST00000543721 ZNF215Q9UL58 517 aaPredicted RBP5.89□□□□□ -1.47
LMO3-229ENST00000543721 SNX14Q9Y5W7 946 aa5.89□□□□□ -1.47
LMO3-229ENST00000543721 NEXMIFQ5QGS0 1516 aa5.89□□□□□ -1.47
LMO3-229ENST00000543721 IRX3P78415 501 aaPredicted RBP5.88□□□□□ -1.47
LMO3-229ENST00000543721 TMCO3Q6UWJ1 677 aa5.88□□□□□ -1.47
LMO3-229ENST00000543721 LUZP1Q86V48 1076 aa5.88□□□□□ -1.47
LMO3-229ENST00000543721 GOLGA6L1Q8N7Z2 621 aa5.88□□□□□ -1.47
LMO3-229ENST00000543721 CACTINQ8WUQ7 758 aaKnown RBP5.88□□□□□ -1.47
LMO3-229ENST00000543721 YY1AP1Q9H869 796 aa5.88□□□□□ -1.47
LMO3-229ENST00000543721 STAG3Q9UJ98 1225 aa5.88□□□□□ -1.47
LMO3-229ENST00000543721 CYP46A1Q9Y6A2 500 aa5.88□□□□□ -1.47
LMO3-229ENST00000543721 CAMSAP1Q5T5Y3 1602 aa5.88□□□□□ -1.47
LMO3-229ENST00000543721 PSDA5PKW4 1024 aaPredicted RBP5.88□□□□□ -1.47
LMO3-229ENST00000543721 GIGYF1O75420 1035 aaPredicted RBP5.88□□□□□ -1.47
LMO3-229ENST00000543721 HMOX1P09601 288 aa5.88□□□□□ -1.47
LMO3-229ENST00000543721 SKILP12757 684 aa5.88□□□□□ -1.47
LMO3-229ENST00000543721 H2AFXP16104 143 aaPredicted RBP5.88□□□□□ -1.47
LMO3-229ENST00000543721 PSMA5P28066 241 aa5.88□□□□□ -1.47
LMO3-229ENST00000543721 HSP90AB4PQ58FF6 505 aa5.88□□□□□ -1.47
LMO3-229ENST00000543721 NOM1Q5C9Z4 860 aaKnown RBP5.88□□□□□ -1.47
LMO3-229ENST00000543721 FBXO38Q6PIJ6 1188 aa5.88□□□□□ -1.47
LMO3-229ENST00000543721 PDRG1Q9NUG6 133 aa5.88□□□□□ -1.47
LMO3-229ENST00000543721 TUBGCP6Q96RT7 1819 aa5.88□□□□□ -1.47
LMO3-229ENST00000543721 CD163L1Q9NR16 1453 aa5.88□□□□□ -1.47
LMO3-229ENST00000543721 NPATQ14207 1427 aa5.88□□□□□ -1.47
LMO3-229ENST00000543721 YTHDC2Q9H6S0 1430 aaKnown RBP5.88□□□□□ -1.47
LMO3-229ENST00000543721 PIK3C2BO00750 1634 aa5.88□□□□□ -1.47
LMO3-229ENST00000543721 VPS37CA5D8V6 355 aaPredicted RBP5.88□□□□□ -1.47
LMO3-229ENST00000543721 ZKSCAN1P17029 563 aaPredicted RBP5.88□□□□□ -1.47
LMO3-229ENST00000543721 LRMPQ12912 555 aa5.88□□□□□ -1.47
LMO3-229ENST00000543721 LARP1BQ659C4 914 aaKnown RBP5.88□□□□□ -1.47
LMO3-229ENST00000543721 CCDC150Q8NCX0 1101 aa5.88□□□□□ -1.47
LMO3-229ENST00000543721 SPATA32Q96LK8 384 aa5.88□□□□□ -1.47
LMO3-229ENST00000543721 AK7Q96M32 723 aa5.88□□□□□ -1.47
LMO3-229ENST00000543721 STK31Q9BXU1 1019 aa5.88□□□□□ -1.47
LMO3-229ENST00000543721 NAT10Q9H0A0 1025 aaKnown RBP5.88□□□□□ -1.47
LMO3-229ENST00000543721 RASSF4Q9H2L5 321 aa5.88□□□□□ -1.47
LMO3-229ENST00000543721 L2HGDHQ9H9P8 463 aa5.88□□□□□ -1.47
LMO3-229ENST00000543721 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.88□□□□□ -1.47
LMO3-229ENST00000543721 ERICH4A6NGS2 130 aa5.87□□□□□ -1.47
LMO3-229ENST00000543721 BECN2A8MW95 431 aa5.87□□□□□ -1.47
LMO3-229ENST00000543721 STX1AQ16623 288 aa5.87□□□□□ -1.47
LMO3-229ENST00000543721 RUFY3Q7L099 469 aa5.87□□□□□ -1.47
LMO3-229ENST00000543721 CCAR2Q8N163 923 aaKnown RBP5.87□□□□□ -1.47
LMO3-229ENST00000543721 HIP1O00291 1037 aa5.87□□□□□ -1.47
LMO3-229ENST00000543721 HNRNPH2P55795 449 aaKnown RBP5.87□□□□□ -1.47
LMO3-229ENST00000543721 SNW1Q13573 536 aaKnown RBP5.87□□□□□ -1.47
LMO3-229ENST00000543721 DACT1Q9NYF0 836 aa5.87□□□□□ -1.47
LMO3-229ENST00000543721 CFAP45Q9UL16 551 aa5.87□□□□□ -1.47
LMO3-229ENST00000543721 TTC21BQ7Z4L5 1316 aa5.87□□□□□ -1.47
LMO3-229ENST00000543721 TTC21AQ8NDW8 1320 aa5.87□□□□□ -1.47
LMO3-229ENST00000543721 ELF2Q15723 593 aa5.87□□□□□ -1.47
LMO3-229ENST00000543721 TTC6Q86TZ1 520 aa5.87□□□□□ -1.47
LMO3-229ENST00000543721 CCDC83Q8IWF9 413 aa5.87□□□□□ -1.47
LMO3-229ENST00000543721 UBXN4Q92575 508 aa5.87□□□□□ -1.47
LMO3-229ENST00000543721 KCNB2Q92953 911 aa5.87□□□□□ -1.47
LMO3-229ENST00000543721 CHMP4CQ96CF2 233 aa5.87□□□□□ -1.47
LMO3-229ENST00000543721 LSG1Q9H089 658 aaKnown RBP5.87□□□□□ -1.47
LMO3-229ENST00000543721 ANO10Q9NW15 660 aa5.87□□□□□ -1.47
LMO3-229ENST00000543721 HYPKQ9NX55 129 aa5.87□□□□□ -1.47
LMO3-229ENST00000543721 FEZ2Q9UHY8 353 aaPredicted RBP5.87□□□□□ -1.47
LMO3-229ENST00000543721 EXOC6BQ9Y2D4 811 aa5.87□□□□□ -1.47
LMO3-229ENST00000543721 EDC4Q6P2E9 1401 aaKnown RBP5.87□□□□□ -1.47
LMO3-229ENST00000543721 DLG5Q8TDM6 1919 aa5.86□□□□□ -1.47
LMO3-229ENST00000543721 CCDC69A6NI79 296 aa5.86□□□□□ -1.47
LMO3-229ENST00000543721 VGLL3A8MV65 326 aa5.86□□□□□ -1.47
LMO3-229ENST00000543721 ATL3Q6DD88 541 aa5.86□□□□□ -1.47
LMO3-229ENST00000543721 TRIM34Q9BYJ4 488 aa5.86□□□□□ -1.47
LMO3-229ENST00000543721 ALDH8A1Q9H2A2 487 aaPredicted RBP5.86□□□□□ -1.47
LMO3-229ENST00000543721 ZSCAN16Q9H4T2 348 aaPredicted RBP5.86□□□□□ -1.47
LMO3-229ENST00000543721 ZSWIM6Q9HCJ5 1215 aa5.86□□□□□ -1.47
LMO3-229ENST00000543721 SLC52A1Q9NWF4 448 aa5.86□□□□□ -1.47
LMO3-229ENST00000543721 CASTP20810 708 aaKnown RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms