RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 BRCA1P38398 1863 aaKnown RBP6.9□□□□□ -1.3
NPIPB4-219ENST00000543660 GNPATO15228 680 aa6.9□□□□□ -1.3
NPIPB4-219ENST00000543660 FOXN1O15353 648 aa6.9□□□□□ -1.3
NPIPB4-219ENST00000543660 CYP27B1O15528 508 aa6.9□□□□□ -1.3
NPIPB4-219ENST00000543660 BRPF1P55201 1214 aaPredicted RBP6.9□□□□□ -1.3
NPIPB4-219ENST00000543660 TMF1P82094 1093 aa6.9□□□□□ -1.3
NPIPB4-219ENST00000543660 FOXK1P85037 733 aa6.9□□□□□ -1.3
NPIPB4-219ENST00000543660 ITPK1Q13572 414 aa6.9□□□□□ -1.3
NPIPB4-219ENST00000543660 FAM161AQ3B820 660 aa6.9□□□□□ -1.3
NPIPB4-219ENST00000543660 NLGN1Q8N2Q7 840 aa6.9□□□□□ -1.3
NPIPB4-219ENST00000543660 USHBP1Q8N6Y0 703 aa6.9□□□□□ -1.3
NPIPB4-219ENST00000543660 PRDM10Q9NQV6 1147 aa6.9□□□□□ -1.3
NPIPB4-219ENST00000543660 EDC4Q6P2E9 1401 aaKnown RBP6.9□□□□□ -1.31
NPIPB4-219ENST00000543660 TNRC6CQ9HCJ0 1690 aaKnown RBP6.9□□□□□ -1.31
NPIPB4-219ENST00000543660 PKD1L3Q7Z443 1732 aa6.9□□□□□ -1.31
NPIPB4-219ENST00000543660 RGPD2P0DJD1 1756 aa6.9□□□□□ -1.31
NPIPB4-219ENST00000543660 MAP2P11137 1827 aaKnown RBP6.9□□□□□ -1.31
NPIPB4-219ENST00000543660 VEGFAP15692 232 aaPredicted RBP6.89□□□□□ -1.31
NPIPB4-219ENST00000543660 AMPHP49418 695 aa6.89□□□□□ -1.31
NPIPB4-219ENST00000543660 RAPGEF4Q8WZA2 1011 aa6.89□□□□□ -1.31
NPIPB4-219ENST00000543660 SLC12A5Q9H2X9 1139 aa6.89□□□□□ -1.31
NPIPB4-219ENST00000543660 CCDC87Q9NVE4 849 aa6.89□□□□□ -1.31
NPIPB4-219ENST00000543660 PIM2Q9P1W9 311 aa6.89□□□□□ -1.31
NPIPB4-219ENST00000543660 PCDH11XQ9BZA7 1347 aa6.89□□□□□ -1.31
NPIPB4-219ENST00000543660 PCDH11YQ9BZA8 1340 aa6.89□□□□□ -1.31
NPIPB4-219ENST00000543660 ARFGEF1Q9Y6D6 1849 aa6.89□□□□□ -1.31
NPIPB4-219ENST00000543660 SBF1O95248 1867 aa6.88□□□□□ -1.31
NPIPB4-219ENST00000543660 GLTPD2A6NH11 291 aa6.88□□□□□ -1.31
NPIPB4-219ENST00000543660 POTECB2RU33 542 aa6.88□□□□□ -1.31
NPIPB4-219ENST00000543660 GYS1P13807 737 aa6.88□□□□□ -1.31
NPIPB4-219ENST00000543660 TATP17735 454 aaPredicted RBP6.88□□□□□ -1.31
NPIPB4-219ENST00000543660 NEUROD2Q15784 382 aa6.88□□□□□ -1.31
NPIPB4-219ENST00000543660 DALRD3Q5D0E6 543 aaKnown RBP6.88□□□□□ -1.31
NPIPB4-219ENST00000543660 HDGFL2Q7Z4V5 671 aaPredicted RBP6.88□□□□□ -1.31
NPIPB4-219ENST00000543660 TMC1Q8TDI8 760 aa6.88□□□□□ -1.31
NPIPB4-219ENST00000543660 MKRN1Q9UHC7 482 aaKnown RBP6.88□□□□□ -1.31
NPIPB4-219ENST00000543660 ITGB4P16144 1822 aa6.87□□□□□ -1.31
NPIPB4-219ENST00000543660 KDM6AO15550 1401 aaPredicted RBP6.87□□□□□ -1.31
NPIPB4-219ENST00000543660 A0A1W2PP64 1363 aa6.87□□□□□ -1.31
NPIPB4-219ENST00000543660 ZC3H4Q9UPT8 1303 aaKnown RBP6.87□□□□□ -1.31
NPIPB4-219ENST00000543660 ATP6V1AP38606 617 aa6.87□□□□□ -1.31
NPIPB4-219ENST00000543660 NKX1-1Q15270 411 aaPredicted RBP6.87□□□□□ -1.31
NPIPB4-219ENST00000543660 TRAPPC3LQ5T215 181 aa6.87□□□□□ -1.31
NPIPB4-219ENST00000543660 PLPP6Q8IY26 295 aa6.87□□□□□ -1.31
NPIPB4-219ENST00000543660 ARHGEF1Q92888 912 aaKnown RBP6.87□□□□□ -1.31
NPIPB4-219ENST00000543660 ABHD8Q96I13 439 aa6.87□□□□□ -1.31
NPIPB4-219ENST00000543660 SLC4A5Q9BY07 1137 aa6.87□□□□□ -1.31
NPIPB4-219ENST00000543660 IRX2Q9BZI1 471 aaPredicted RBP6.87□□□□□ -1.31
NPIPB4-219ENST00000543660 GPHNQ9NQX3 736 aaPredicted RBP6.87□□□□□ -1.31
NPIPB4-219ENST00000543660 ASAP1Q9ULH1 1129 aa6.87□□□□□ -1.31
NPIPB4-219ENST00000543660 VPS9D1Q9Y2B5 631 aa6.87□□□□□ -1.31
NPIPB4-219ENST00000543660 C4AP0C0L4 1744 aa6.87□□□□□ -1.31
NPIPB4-219ENST00000543660 PPP1R37O75864 691 aa6.86□□□□□ -1.31
NPIPB4-219ENST00000543660 CHRNA5P30532 468 aa6.86□□□□□ -1.31
NPIPB4-219ENST00000543660 CTCFP49711 727 aaPredicted RBP6.86□□□□□ -1.31
NPIPB4-219ENST00000543660 RGS19P49795 217 aa6.86□□□□□ -1.31
NPIPB4-219ENST00000543660 RASSF7Q02833 373 aa6.86□□□□□ -1.31
NPIPB4-219ENST00000543660 RRS1Q15050 365 aaKnown RBP6.86□□□□□ -1.31
NPIPB4-219ENST00000543660 L3MBTL2Q969R5 705 aa6.86□□□□□ -1.31
NPIPB4-219ENST00000543660 COG3Q96JB2 828 aa6.86□□□□□ -1.31
NPIPB4-219ENST00000543660 KCNK17Q96T54 332 aa6.86□□□□□ -1.31
NPIPB4-219ENST00000543660 RSPH6AQ9H0K4 717 aa6.86□□□□□ -1.31
NPIPB4-219ENST00000543660 RYDENQ9NUL5 291 aaKnown RBP6.86□□□□□ -1.31
NPIPB4-219ENST00000543660 TERF2IPQ9NYB0 399 aa6.86□□□□□ -1.31
NPIPB4-219ENST00000543660 RTCBQ9Y3I0 505 aaKnown RBP6.86□□□□□ -1.31
NPIPB4-219ENST00000543660 PARP3Q9Y6F1 533 aa6.86□□□□□ -1.31
NPIPB4-219ENST00000543660 RTL1A6NKG5 1358 aa6.85□□□□□ -1.31
NPIPB4-219ENST00000543660 CNTNAP1P78357 1384 aa6.85□□□□□ -1.31
NPIPB4-219ENST00000543660 LBX1P52954 281 aa6.85□□□□□ -1.31
NPIPB4-219ENST00000543660 PTPN5P54829 565 aa6.85□□□□□ -1.31
NPIPB4-219ENST00000543660 MLLT1Q03111 559 aaPredicted RBP6.85□□□□□ -1.31
NPIPB4-219ENST00000543660 SLC4A9Q96Q91 983 aa6.85□□□□□ -1.31
NPIPB4-219ENST00000543660 ATG3Q9NT62 314 aa6.85□□□□□ -1.31
NPIPB4-219ENST00000543660 WBP1LQ9NX94 342 aa6.85□□□□□ -1.31
NPIPB4-219ENST00000543660 PDE4DIPQ5VU43 2346 aa6.84□□□□□ -1.31
NPIPB4-219ENST00000543660 ROCK2O75116 1388 aaKnown RBP6.84□□□□□ -1.31
NPIPB4-219ENST00000543660 KDRP35968 1356 aa6.84□□□□□ -1.31
NPIPB4-219ENST00000543660 RPS6KA4O75676 772 aa6.84□□□□□ -1.31
NPIPB4-219ENST00000543660 LMNB1P20700 586 aa6.84□□□□□ -1.31
NPIPB4-219ENST00000543660 RFC4P35249 363 aa6.84□□□□□ -1.31
NPIPB4-219ENST00000543660 DDR1Q08345 913 aa6.84□□□□□ -1.31
NPIPB4-219ENST00000543660 HSP90AB2PQ58FF8 381 aa6.84□□□□□ -1.31
NPIPB4-219ENST00000543660 RC3H1Q5TC82 1133 aaKnown RBP6.84□□□□□ -1.31
NPIPB4-219ENST00000543660 TMOD3Q9NYL9 352 aa6.84□□□□□ -1.31
NPIPB4-219ENST00000543660 INSRP06213 1382 aa6.83□□□□□ -1.32
NPIPB4-219ENST00000543660 VEGFBP49765 207 aa6.83□□□□□ -1.32
NPIPB4-219ENST00000543660 THSD4Q6ZMP0 1018 aa6.83□□□□□ -1.32
NPIPB4-219ENST00000543660 AIDAQ96BJ3 306 aa6.83□□□□□ -1.32
NPIPB4-219ENST00000543660 SMG6Q86US8 1419 aaKnown RBP6.83□□□□□ -1.32
NPIPB4-219ENST00000543660 PASKQ96RG2 1323 aa6.82□□□□□ -1.32
NPIPB4-219ENST00000543660 CNTNAP4Q9C0A0 1308 aa6.82□□□□□ -1.32
NPIPB4-219ENST00000543660 NFKBIEO00221 500 aa6.82□□□□□ -1.32
NPIPB4-219ENST00000543660 POLRMTO00411 1230 aaKnown RBP6.82□□□□□ -1.32
NPIPB4-219ENST00000543660 HSPA8P11142 646 aaKnown RBP6.82□□□□□ -1.32
NPIPB4-219ENST00000543660 TM4SF1P30408 202 aa6.82□□□□□ -1.32
NPIPB4-219ENST00000543660 PUS7Q96PZ0 661 aaKnown RBP6.82□□□□□ -1.32
NPIPB4-219ENST00000543660 BCL2L12Q9HB09 334 aa6.82□□□□□ -1.32
NPIPB4-219ENST00000543660 SRP68Q9UHB9 627 aaKnown RBP6.82□□□□□ -1.32
NPIPB4-219ENST00000543660 TNRC18O15417 2968 aaPredicted RBP6.82□□□□□ -1.32
NPIPB4-219ENST00000543660 NCAPD2Q15021 1401 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms