RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 CAMTA2O94983 1202 aa9.39□□□□□ -0.91
NUP43-206ENST00000543637 EIF4A1P60842 406 aaKnown RBP9.39□□□□□ -0.91
NUP43-206ENST00000543637 NEUROD2Q15784 382 aa9.39□□□□□ -0.91
NUP43-206ENST00000543637 CNKSR1Q969H4 720 aa9.39□□□□□ -0.91
NUP43-206ENST00000543637 TSPYL4Q9UJ04 414 aa9.39□□□□□ -0.91
NUP43-206ENST00000543637 LAMB4A4D0S4 1761 aa9.39□□□□□ -0.91
NUP43-206ENST00000543637 BCORQ6W2J9 1755 aa9.39□□□□□ -0.91
NUP43-206ENST00000543637 KDM3BQ7LBC6 1761 aa9.39□□□□□ -0.91
NUP43-206ENST00000543637 RGL2O15211 777 aa9.38□□□□□ -0.91
NUP43-206ENST00000543637 LMNB1P20700 586 aa9.38□□□□□ -0.91
NUP43-206ENST00000543637 TMPOP42166 694 aaKnown RBP9.38□□□□□ -0.91
NUP43-206ENST00000543637 PRR5LQ6MZQ0 368 aa9.38□□□□□ -0.91
NUP43-206ENST00000543637 DPY19L2Q6NUT2 758 aa9.38□□□□□ -0.91
NUP43-206ENST00000543637 KIF6Q6ZMV9 814 aa9.38□□□□□ -0.91
NUP43-206ENST00000543637 CCDC24Q8N4L8 307 aa9.38□□□□□ -0.91
NUP43-206ENST00000543637 RUNDC1Q96C34 613 aa9.38□□□□□ -0.91
NUP43-206ENST00000543637 BABAM1Q9NWV8 329 aa9.38□□□□□ -0.91
NUP43-206ENST00000543637 ZNF219Q9P2Y4 722 aaPredicted RBP9.38□□□□□ -0.91
NUP43-206ENST00000543637 NIP7Q9Y221 180 aaKnown RBP eCLIP9.38□□□□□ -0.91
NUP43-206ENST00000543637 ANKRD31Q8N7Z5 1873 aa9.38□□□□□ -0.91
NUP43-206ENST00000543637 ADCY9O60503 1353 aa9.37□□□□□ -0.91
NUP43-206ENST00000543637 FAM177BA6PVY3 158 aa9.37□□□□□ -0.91
NUP43-206ENST00000543637 ERVV-1B6SEH8 477 aa9.37□□□□□ -0.91
NUP43-206ENST00000543637 TOMM70O94826 608 aa9.37□□□□□ -0.91
NUP43-206ENST00000543637 MYL6BP14649 208 aa9.37□□□□□ -0.91
NUP43-206ENST00000543637 EIF2S2P20042 333 aaKnown RBP9.37□□□□□ -0.91
NUP43-206ENST00000543637 ALDH1B1P30837 517 aa9.37□□□□□ -0.91
NUP43-206ENST00000543637 SOGA3Q5TF21 947 aa9.37□□□□□ -0.91
NUP43-206ENST00000543637 MASTLQ96GX5 879 aa9.37□□□□□ -0.91
NUP43-206ENST00000543637 THUMPD2Q9BTF0 503 aaKnown RBP9.37□□□□□ -0.91
NUP43-206ENST00000543637 NYXQ9GZU5 481 aa9.37□□□□□ -0.91
NUP43-206ENST00000543637 RNF216Q9NWF9 866 aaPredicted RBP9.37□□□□□ -0.91
NUP43-206ENST00000543637 LAS1LQ9Y4W2 734 aaKnown RBP9.37□□□□□ -0.91
NUP43-206ENST00000543637 NBPF26B4DH59 902 aa9.36□□□□□ -0.91
NUP43-206ENST00000543637 C21orf2O43822 256 aa9.36□□□□□ -0.91
NUP43-206ENST00000543637 STYK1Q6J9G0 422 aa9.36□□□□□ -0.91
NUP43-206ENST00000543637 NBPF10Q6P3W6 841 aaKnown RBP9.36□□□□□ -0.91
NUP43-206ENST00000543637 CCDC146Q8IYE0 955 aa9.36□□□□□ -0.91
NUP43-206ENST00000543637 NBPF15Q8N660 670 aa9.36□□□□□ -0.91
NUP43-206ENST00000543637 RRAGCQ9HB90 399 aa9.36□□□□□ -0.91
NUP43-206ENST00000543637 DICER1Q9UPY3 1922 aaKnown RBP9.36□□□□□ -0.91
NUP43-206ENST00000543637 ERBB4Q15303 1308 aa9.35□□□□□ -0.91
NUP43-206ENST00000543637 NPR1P16066 1061 aa9.35□□□□□ -0.91
NUP43-206ENST00000543637 HLFQ16534 295 aa9.35□□□□□ -0.91
NUP43-206ENST00000543637 PPP1R42Q7Z4L9 355 aa9.35□□□□□ -0.91
NUP43-206ENST00000543637 ADAMTS8Q9UP79 889 aa9.35□□□□□ -0.91
NUP43-206ENST00000543637 MAP3K15Q6ZN16 1313 aa9.34□□□□□ -0.91
NUP43-206ENST00000543637 ZC3H4Q9UPT8 1303 aaKnown RBP9.34□□□□□ -0.91
NUP43-206ENST00000543637 FER1L6Q2WGJ9 1857 aa9.34□□□□□ -0.91
NUP43-206ENST00000543637 SLX4Q8IY92 1834 aa9.34□□□□□ -0.91
NUP43-206ENST00000543637 KIF3CO14782 793 aa9.34□□□□□ -0.91
NUP43-206ENST00000543637 SRGNP10124 158 aa9.34□□□□□ -0.91
NUP43-206ENST00000543637 HSPA6P17066 643 aa9.34□□□□□ -0.91
NUP43-206ENST00000543637 RASSF7Q02833 373 aa9.34□□□□□ -0.91
NUP43-206ENST00000543637 TMX4Q9H1E5 349 aaPredicted RBP9.34□□□□□ -0.91
NUP43-206ENST00000543637 RNF39Q9H2S5 420 aa9.34□□□□□ -0.91
NUP43-206ENST00000543637 PRKRIP1Q9H875 184 aaPredicted RBP9.34□□□□□ -0.91
NUP43-206ENST00000543637 NMRK2Q9NPI5 230 aa9.34□□□□□ -0.91
NUP43-206ENST00000543637 ARFGEF2Q9Y6D5 1785 aa9.34□□□□□ -0.91
NUP43-206ENST00000543637 TNRC6CQ9HCJ0 1690 aaKnown RBP9.33□□□□□ -0.92
NUP43-206ENST00000543637 GLTPD2A6NH11 291 aa9.33□□□□□ -0.92
NUP43-206ENST00000543637 VEGFAP15692 232 aaPredicted RBP9.33□□□□□ -0.92
NUP43-206ENST00000543637 CALD1Q05682 793 aaKnown RBP9.33□□□□□ -0.92
NUP43-206ENST00000543637 ERFEQ4G0M1 354 aa9.33□□□□□ -0.92
NUP43-206ENST00000543637 TTLL7Q6ZT98 887 aa9.33□□□□□ -0.92
NUP43-206ENST00000543637 RPGRQ92834 1020 aaKnown RBP9.33□□□□□ -0.92
NUP43-206ENST00000543637 ZBTB3Q9H5J0 574 aa9.33□□□□□ -0.92
NUP43-206ENST00000543637 APLP1P51693 650 aa9.32□□□□□ -0.92
NUP43-206ENST00000543637 AIMP1Q12904 312 aaKnown RBP9.32□□□□□ -0.92
NUP43-206ENST00000543637 PARP10Q53GL7 1025 aa9.32□□□□□ -0.92
NUP43-206ENST00000543637 CCDC93Q567U6 631 aa9.32□□□□□ -0.92
NUP43-206ENST00000543637 HSP90AB3PQ58FF7 597 aa9.32□□□□□ -0.92
NUP43-206ENST00000543637 PRPF40BQ6NWY9 871 aaKnown RBP9.32□□□□□ -0.92
NUP43-206ENST00000543637 GIGYF2Q6Y7W6 1299 aaKnown RBP9.32□□□□□ -0.92
NUP43-206ENST00000543637 RTKN2Q8IZC4 609 aa9.32□□□□□ -0.92
NUP43-206ENST00000543637 RBM46Q8TBY0 533 aaKnown RBP9.32□□□□□ -0.92
NUP43-206ENST00000543637 NECTIN2Q92692 538 aa9.32□□□□□ -0.92
NUP43-206ENST00000543637 CHMP4AQ9BY43 222 aa9.32□□□□□ -0.92
NUP43-206ENST00000543637 TAOK3Q9H2K8 898 aa9.32□□□□□ -0.92
NUP43-206ENST00000543637 COL11A2P13942 1736 aaPredicted RBP9.31□□□□□ -0.92
NUP43-206ENST00000543637 TIAM2Q8IVF5 1701 aa9.31□□□□□ -0.92
NUP43-206ENST00000543637 KLRG2A4D1S0 409 aaPredicted RBP9.31□□□□□ -0.92
NUP43-206ENST00000543637 CHL1O00533 1208 aa9.31□□□□□ -0.92
NUP43-206ENST00000543637 GPTP24298 496 aa9.31□□□□□ -0.92
NUP43-206ENST00000543637 FSTL1Q12841 308 aa9.31□□□□□ -0.92
NUP43-206ENST00000543637 GRIPAP1Q4V328 841 aa9.31□□□□□ -0.92
NUP43-206ENST00000543637 RBM17Q96I25 401 aaKnown RBP9.31□□□□□ -0.92
NUP43-206ENST00000543637 NLRP3Q96P20 1036 aa9.31□□□□□ -0.92
NUP43-206ENST00000543637 NFKBIEO00221 500 aa9.3□□□□□ -0.92
NUP43-206ENST00000543637 GNAI1P63096 354 aa9.3□□□□□ -0.92
NUP43-206ENST00000543637 SUSD4Q5VX71 490 aa9.3□□□□□ -0.92
NUP43-206ENST00000543637 CC2D2BQ6DHV5 1058 aa9.3□□□□□ -0.92
NUP43-206ENST00000543637 COPS6Q7L5N1 327 aa9.3□□□□□ -0.92
NUP43-206ENST00000543637 NUTM1Q86Y26 1132 aa9.3□□□□□ -0.92
NUP43-206ENST00000543637 ZNF34Q8IZ26 560 aa9.3□□□□□ -0.92
NUP43-206ENST00000543637 SMC1BQ8NDV3 1235 aa9.3□□□□□ -0.92
NUP43-206ENST00000543637 CFAP44Q96MT7 982 aa9.3□□□□□ -0.92
NUP43-206ENST00000543637 UTP14AQ9BVJ6 771 aaKnown RBP9.3□□□□□ -0.92
NUP43-206ENST00000543637 DDX21Q9NR30 783 aaKnown RBP eCLIP9.3□□□□□ -0.92
NUP43-206ENST00000543637 DBF4Q9UBU7 674 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms