RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-213ENST00000543324 C21orf2O43822 256 aa9.01□□□□□ -0.97
CIT-213ENST00000543324 CENPBP07199 599 aaPredicted RBP9.01□□□□□ -0.97
CIT-213ENST00000543324 COL5A3P25940 1745 aaPredicted RBP9.01□□□□□ -0.97
CIT-213ENST00000543324 KIF23Q02241 960 aaPredicted RBP9.01□□□□□ -0.97
CIT-213ENST00000543324 FKBP8Q14318 412 aa9.01□□□□□ -0.97
CIT-213ENST00000543324 GPR153Q6NV75 609 aa9.01□□□□□ -0.97
CIT-213ENST00000543324 SYNE4Q8N205 404 aa9.01□□□□□ -0.97
CIT-213ENST00000543324 PRUNE2Q8WUY3 3088 aa9□□□□□ -0.97
CIT-213ENST00000543324 A0A1W2PPC1 479 aa9□□□□□ -0.97
CIT-213ENST00000543324 ATP6V1AP38606 617 aa9□□□□□ -0.97
CIT-213ENST00000543324 DEFB123Q8N688 67 aa9□□□□□ -0.97
CIT-213ENST00000543324 ZNF296Q8WUU4 475 aaPredicted RBP9□□□□□ -0.97
CIT-213ENST00000543324 BCORQ6W2J9 1755 aa8.99□□□□□ -0.97
CIT-213ENST00000543324 ST20-MTHFSA0A0A6YYL1 179 aa8.99□□□□□ -0.97
CIT-213ENST00000543324 BICDL1Q6ZP65 573 aa8.99□□□□□ -0.97
CIT-213ENST00000543324 C2CD5Q86YS7 1000 aa8.99□□□□□ -0.97
CIT-213ENST00000543324 SLC12A5Q9H2X9 1139 aa8.99□□□□□ -0.97
CIT-213ENST00000543324 ZNF831Q5JPB2 1677 aa8.99□□□□□ -0.97
CIT-213ENST00000543324 PPEF1O14829 653 aaPredicted RBP8.98□□□□□ -0.97
CIT-213ENST00000543324 TM4SF1P30408 202 aa8.98□□□□□ -0.97
CIT-213ENST00000543324 MAP3K12Q12852 859 aa8.98□□□□□ -0.97
CIT-213ENST00000543324 NME9Q86XW9 330 aa8.98□□□□□ -0.97
CIT-213ENST00000543324 PIGBQ92521 554 aa8.98□□□□□ -0.97
CIT-213ENST00000543324 MTMR10Q9NXD2 777 aa8.98□□□□□ -0.97
CIT-213ENST00000543324 TIMELESSQ9UNS1 1208 aa8.98□□□□□ -0.97
CIT-213ENST00000543324 MYH14Q7Z406 1995 aaKnown RBP8.97□□□□□ -0.97
CIT-213ENST00000543324 COL11A2P13942 1736 aaPredicted RBP8.97□□□□□ -0.97
CIT-213ENST00000543324 H0YIN7 160 aa8.97□□□□□ -0.97
CIT-213ENST00000543324 RPS6KA4O75676 772 aa8.97□□□□□ -0.97
CIT-213ENST00000543324 RC3H1Q5TC82 1133 aaKnown RBP8.97□□□□□ -0.97
CIT-213ENST00000543324 Q7L0L9 218 aa8.97□□□□□ -0.97
CIT-213ENST00000543324 GPC2Q8N158 579 aa8.97□□□□□ -0.97
CIT-213ENST00000543324 SRP68Q9UHB9 627 aaKnown RBP8.97□□□□□ -0.97
CIT-213ENST00000543324 USP42Q9H9J4 1324 aaKnown RBP8.97□□□□□ -0.97
CIT-213ENST00000543324 RTL1A6NKG5 1358 aa8.97□□□□□ -0.97
CIT-213ENST00000543324 KDRP35968 1356 aa8.97□□□□□ -0.97
CIT-213ENST00000543324 TMEM265A0A087WTH1 108 aa8.96□□□□□ -0.98
CIT-213ENST00000543324 SLC24A1O60721 1099 aa8.96□□□□□ -0.98
CIT-213ENST00000543324 HUNKP57058 714 aa8.96□□□□□ -0.98
CIT-213ENST00000543324 HDGFL2Q7Z4V5 671 aaPredicted RBP8.96□□□□□ -0.98
CIT-213ENST00000543324 CSRNP1Q96S65 589 aa8.96□□□□□ -0.98
CIT-213ENST00000543324 TERF2IPQ9NYB0 399 aa8.96□□□□□ -0.98
CIT-213ENST00000543324 CNTNAP4Q9C0A0 1308 aa8.96□□□□□ -0.98
CIT-213ENST00000543324 ARFGEF2Q9Y6D5 1785 aa8.96□□□□□ -0.98
CIT-213ENST00000543324 NCAPD2Q15021 1401 aa8.96□□□□□ -0.98
CIT-213ENST00000543324 PKD1L2Q7Z442 2459 aa8.95□□□□□ -0.98
CIT-213ENST00000543324 NOM1Q5C9Z4 860 aaKnown RBP8.95□□□□□ -0.98
CIT-213ENST00000543324 RGMBQ6NW40 437 aa8.95□□□□□ -0.98
CIT-213ENST00000543324 USP50Q70EL3 339 aaPredicted RBP8.95□□□□□ -0.98
CIT-213ENST00000543324 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.95□□□□□ -0.98
CIT-213ENST00000543324 CCDC102AQ96A19 550 aa8.95□□□□□ -0.98
CIT-213ENST00000543324 ARIH1Q9Y4X5 557 aaPredicted RBP8.95□□□□□ -0.98
CIT-213ENST00000543324 CACNA1SQ13698 1873 aa8.95□□□□□ -0.98
CIT-213ENST00000543324 ANKRD31Q8N7Z5 1873 aa8.95□□□□□ -0.98
CIT-213ENST00000543324 CARMIL3Q8ND23 1372 aa8.95□□□□□ -0.98
CIT-213ENST00000543324 SLX4Q8IY92 1834 aa8.94□□□□□ -0.98
CIT-213ENST00000543324 FZD9O00144 591 aa8.94□□□□□ -0.98
CIT-213ENST00000543324 GLIS2Q9BZE0 524 aaPredicted RBP8.94□□□□□ -0.98
CIT-213ENST00000543324 CGNL1Q0VF96 1302 aa8.94□□□□□ -0.98
CIT-213ENST00000543324 MAP3K19Q56UN5 1328 aa8.94□□□□□ -0.98
CIT-213ENST00000543324 PCDH11XQ9BZA7 1347 aa8.94□□□□□ -0.98
CIT-213ENST00000543324 PCDH11YQ9BZA8 1340 aa8.94□□□□□ -0.98
CIT-213ENST00000543324 TNFRSF10AO00220 468 aa8.93□□□□□ -0.98
CIT-213ENST00000543324 LMOD1P29536 600 aaPredicted RBP8.93□□□□□ -0.98
CIT-213ENST00000543324 EPS15P42566 896 aa8.93□□□□□ -0.98
CIT-213ENST00000543324 SCNN1DP51172 638 aa8.93□□□□□ -0.98
CIT-213ENST00000543324 SYMPKQ92797 1274 aaKnown RBP8.93□□□□□ -0.98
CIT-213ENST00000543324 ZNF408Q9H9D4 720 aa8.93□□□□□ -0.98
CIT-213ENST00000543324 ASAP1Q9ULH1 1129 aa8.93□□□□□ -0.98
CIT-213ENST00000543324 KIF24Q5T7B8 1368 aa8.93□□□□□ -0.98
CIT-213ENST00000543324 GPR25O00155 361 aa8.92□□□□□ -0.98
CIT-213ENST00000543324 SOGA3Q5TF21 947 aa8.92□□□□□ -0.98
CIT-213ENST00000543324 REM2Q8IYK8 340 aaPredicted RBP8.92□□□□□ -0.98
CIT-213ENST00000543324 TMC1Q8TDI8 760 aa8.92□□□□□ -0.98
CIT-213ENST00000543324 IP6K1Q92551 441 aa8.92□□□□□ -0.98
CIT-213ENST00000543324 ARMC5Q96C12 935 aa8.92□□□□□ -0.98
CIT-213ENST00000543324 GTF3C3Q9Y5Q9 886 aa8.92□□□□□ -0.98
CIT-213ENST00000543324 RPTORQ8N122 1335 aa8.91□□□□□ -0.98
CIT-213ENST00000543324 FYB1O15117 783 aa8.91□□□□□ -0.98
CIT-213ENST00000543324 SLC10A3P09131 477 aa8.91□□□□□ -0.98
CIT-213ENST00000543324 ZNF622Q969S3 477 aaKnown RBP eCLIP8.91□□□□□ -0.981e-7■■□□□ 13.1
CIT-213ENST00000543324 LTV1Q96GA3 475 aaPredicted RBP8.91□□□□□ -0.98
CIT-213ENST00000543324 SLC4A9Q96Q91 983 aa8.91□□□□□ -0.98
CIT-213ENST00000543324 CYP27B1O15528 508 aa8.9□□□□□ -0.98
CIT-213ENST00000543324 TBC1D8O95759 1140 aa8.9□□□□□ -0.98
CIT-213ENST00000543324 HOXC9P31274 260 aa8.9□□□□□ -0.98
CIT-213ENST00000543324 ZNF157P51786 506 aaPredicted RBP8.89□□□□□ -0.99
CIT-213ENST00000543324 NFIXQ14938 502 aa8.89□□□□□ -0.99
CIT-213ENST00000543324 CARD14Q9BXL6 1004 aa8.89□□□□□ -0.99
CIT-213ENST00000543324 PGAP2Q9UHJ9 254 aa8.89□□□□□ -0.99
CIT-213ENST00000543324 PDZRN3Q9UPQ7 1066 aa8.89□□□□□ -0.99
CIT-213ENST00000543324 FLT4P35916 1363 aa8.88□□□□□ -0.99
CIT-213ENST00000543324 FKTNO75072 461 aa8.88□□□□□ -0.99
CIT-213ENST00000543324 SERPINB2P05120 415 aa8.88□□□□□ -0.99
CIT-213ENST00000543324 FKBP4Q02790 459 aaKnown RBP eCLIP8.88□□□□□ -0.99
CIT-213ENST00000543324 CDCA8Q53HL2 280 aa8.88□□□□□ -0.99
CIT-213ENST00000543324 DIEXFQ68CQ4 756 aaKnown RBP8.88□□□□□ -0.99
CIT-213ENST00000543324 ALYREFQ86V81 257 aaKnown RBP8.88□□□□□ -0.99
CIT-213ENST00000543324 COG3Q96JB2 828 aa8.88□□□□□ -0.99
CIT-213ENST00000543324 TMEM106CQ9BVX2 250 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms