RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 PPP4R2Q9NY27 417 aa13.49□□□□□ -0.25
DDB1-221ENST00000543162 EIF5P55010 431 aaKnown RBP13.48□□□□□ -0.25
DDB1-221ENST00000543162 NEXNQ0ZGT2 675 aa13.48□□□□□ -0.25
DDB1-221ENST00000543162 AAMPQ13685 434 aa13.48□□□□□ -0.25
DDB1-221ENST00000543162 SRCIN1Q9C0H9 1055 aa13.48□□□□□ -0.25
DDB1-221ENST00000543162 LRRC4BQ9NT99 713 aa13.48□□□□□ -0.25
DDB1-221ENST00000543162 N4BP2Q86UW6 1770 aaPredicted RBP13.48□□□□□ -0.25
DDB1-221ENST00000543162 ATP10DQ9P241 1426 aa13.47□□□□□ -0.25
DDB1-221ENST00000543162 SF3B2Q13435 895 aaKnown RBP13.47□□□□□ -0.25
DDB1-221ENST00000543162 BEND3Q5T5X7 828 aa13.47□□□□□ -0.25
DDB1-221ENST00000543162 DZIP3Q86Y13 1208 aaKnown RBP13.47□□□□□ -0.25
DDB1-221ENST00000543162 METTL22Q9BUU2 404 aaPredicted RBP13.47□□□□□ -0.25
DDB1-221ENST00000543162 ZBTB3Q9H5J0 574 aa13.47□□□□□ -0.25
DDB1-221ENST00000543162 ARFGEF2Q9Y6D5 1785 aa13.47□□□□□ -0.25
DDB1-221ENST00000543162 C4BP0C0L5 1744 aa13.47□□□□□ -0.25
DDB1-221ENST00000543162 MAP3K15Q6ZN16 1313 aa13.46□□□□□ -0.25
DDB1-221ENST00000543162 EP400Q96L91 3159 aa13.46□□□□□ -0.25
DDB1-221ENST00000543162 A0A087WZG4 1122 aa13.46□□□□□ -0.25
DDB1-221ENST00000543162 ZBTB7BO15156 539 aaPredicted RBP13.46□□□□□ -0.25
DDB1-221ENST00000543162 GNPATO15228 680 aa13.46□□□□□ -0.25
DDB1-221ENST00000543162 RPS6KA4O75676 772 aa13.46□□□□□ -0.25
DDB1-221ENST00000543162 ALDH1L1O75891 902 aa13.46□□□□□ -0.25
DDB1-221ENST00000543162 PROM2Q8N271 834 aa13.46□□□□□ -0.25
DDB1-221ENST00000543162 LINS1Q8NG48 757 aa13.46□□□□□ -0.25
DDB1-221ENST00000543162 AK7Q96M32 723 aa13.46□□□□□ -0.25
DDB1-221ENST00000543162 MYD88Q99836 296 aa13.46□□□□□ -0.25
DDB1-221ENST00000543162 COL15A1P39059 1388 aa13.45□□□□□ -0.26
DDB1-221ENST00000543162 RGPD3A6NKT7 1758 aaPredicted RBP13.45□□□□□ -0.26
DDB1-221ENST00000543162 RGPD4Q7Z3J3 1758 aa13.45□□□□□ -0.26
DDB1-221ENST00000543162 NUP188Q5SRE5 1749 aa13.45□□□□□ -0.26
DDB1-221ENST00000543162 ZBTB40Q9NUA8 1239 aa13.45□□□□□ -0.26
DDB1-221ENST00000543162 TBC1D2BQ9UPU7 963 aa13.45□□□□□ -0.26
DDB1-221ENST00000543162 RTCBQ9Y3I0 505 aaKnown RBP13.45□□□□□ -0.26
DDB1-221ENST00000543162 ERVV-1B6SEH8 477 aa13.44□□□□□ -0.26
DDB1-221ENST00000543162 CWF19L2Q2TBE0 894 aaKnown RBP13.44□□□□□ -0.26
DDB1-221ENST00000543162 CCDC136Q96JN2 1154 aa13.44□□□□□ -0.26
DDB1-221ENST00000543162 MEIS3Q99687 375 aa13.44□□□□□ -0.26
DDB1-221ENST00000543162 NEURL1BA8MQ27 555 aa13.43□□□□□ -0.26
DDB1-221ENST00000543162 ATP5J2-PTCD1G3V325 749 aa13.43□□□□□ -0.26
DDB1-221ENST00000543162 IGKV5-2P06315 115 aa13.43□□□□□ -0.26
DDB1-221ENST00000543162 GNAI3P08754 354 aa13.43□□□□□ -0.26
DDB1-221ENST00000543162 BAG6P46379 1132 aa13.43□□□□□ -0.26
DDB1-221ENST00000543162 HSP90AB3PQ58FF7 597 aa13.43□□□□□ -0.26
DDB1-221ENST00000543162 GIGYF2Q6Y7W6 1299 aaKnown RBP13.43□□□□□ -0.26
DDB1-221ENST00000543162 EN1Q05925 392 aaPredicted RBP13.42□□□□□ -0.26
DDB1-221ENST00000543162 TCIRG1Q13488 830 aa13.42□□□□□ -0.26
DDB1-221ENST00000543162 HLFQ16534 295 aa13.42□□□□□ -0.26
DDB1-221ENST00000543162 CCDC125Q86Z20 511 aa13.42□□□□□ -0.26
DDB1-221ENST00000543162 CAMKK2Q96RR4 588 aa13.42□□□□□ -0.26
DDB1-221ENST00000543162 USP44Q9H0E7 712 aa13.42□□□□□ -0.26
DDB1-221ENST00000543162 C9orf78Q9NZ63 289 aaPredicted RBP13.42□□□□□ -0.26
DDB1-221ENST00000543162 AFDNP55196 1824 aaKnown RBP13.41□□□□□ -0.26
DDB1-221ENST00000543162 PHF14O94880 888 aa13.41□□□□□ -0.26
DDB1-221ENST00000543162 CAMTA2O94983 1202 aa13.41□□□□□ -0.26
DDB1-221ENST00000543162 UBTFL1P0CB47 393 aaPredicted RBP13.41□□□□□ -0.26
DDB1-221ENST00000543162 ADRA2BP18089 450 aa13.41□□□□□ -0.26
DDB1-221ENST00000543162 GCKRQ14397 625 aa13.41□□□□□ -0.26
DDB1-221ENST00000543162 TRAPPC3LQ5T215 181 aa13.41□□□□□ -0.26
DDB1-221ENST00000543162 B4GALNT3Q6L9W6 998 aa13.41□□□□□ -0.26
DDB1-221ENST00000543162 SMIM5Q71RC9 77 aa13.41□□□□□ -0.26
DDB1-221ENST00000543162 C1orf115Q9H7X2 142 aa13.41□□□□□ -0.26
DDB1-221ENST00000543162 ZNF652Q9Y2D9 606 aa13.41□□□□□ -0.26
DDB1-221ENST00000543162 IBTKQ9P2D0 1353 aaPredicted RBP13.41□□□□□ -0.26
DDB1-221ENST00000543162 GRM8O00222 908 aa13.4□□□□□ -0.26
DDB1-221ENST00000543162 ZPR1O75312 459 aa13.4□□□□□ -0.26
DDB1-221ENST00000543162 GNAI2P04899 355 aa13.4□□□□□ -0.26
DDB1-221ENST00000543162 TRIM28Q13263 835 aaKnown RBP13.4□□□□□ -0.26
DDB1-221ENST00000543162 EZH2Q15910 746 aaKnown RBP13.4□□□□□ -0.26
DDB1-221ENST00000543162 AMIGO3Q86WK7 504 aa13.4□□□□□ -0.26
DDB1-221ENST00000543162 CCDC191Q8NCU4 936 aa13.4□□□□□ -0.26
DDB1-221ENST00000543162 ARHGEF1Q92888 912 aaKnown RBP13.4□□□□□ -0.26
DDB1-221ENST00000543162 ISCA1Q9BUE6 129 aa13.4□□□□□ -0.26
DDB1-221ENST00000543162 CWC25Q9NXE8 425 aaPredicted RBP13.4□□□□□ -0.26
DDB1-221ENST00000543162 NARFQ9UHQ1 456 aa13.4□□□□□ -0.26
DDB1-221ENST00000543162 HDAC5Q9UQL6 1122 aa13.4□□□□□ -0.26
DDB1-221ENST00000543162 PCDHB15Q9Y5E8 787 aa13.4□□□□□ -0.26
DDB1-221ENST00000543162 NUP98P52948 1817 aa13.4□□□□□ -0.26
DDB1-221ENST00000543162 UBR3Q6ZT12 1888 aa13.4□□□□□ -0.26
DDB1-221ENST00000543162 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.39□□□□□ -0.27
DDB1-221ENST00000543162 RGL2O15211 777 aa13.39□□□□□ -0.27
DDB1-221ENST00000543162 NBPF7P0C2Y1 421 aaPredicted RBP13.39□□□□□ -0.27
DDB1-221ENST00000543162 GPTP24298 496 aa13.39□□□□□ -0.27
DDB1-221ENST00000543162 SSFA2P28290 1259 aa13.39□□□□□ -0.27
DDB1-221ENST00000543162 RFC4P35249 363 aa13.39□□□□□ -0.27
DDB1-221ENST00000543162 TFCP2L1Q9NZI6 479 aa13.39□□□□□ -0.27
DDB1-221ENST00000543162 ANKRD36CQ5JPF3 1778 aa13.39□□□□□ -0.27
DDB1-221ENST00000543162 BCORQ6W2J9 1755 aa13.39□□□□□ -0.27
DDB1-221ENST00000543162 UTYO14607 1347 aa13.39□□□□□ -0.27
DDB1-221ENST00000543162 ZNF827Q17R98 1081 aa13.38□□□□□ -0.27
DDB1-221ENST00000543162 CLEC4GQ6UXB4 293 aa13.38□□□□□ -0.27
DDB1-221ENST00000543162 DEFB132Q7Z7B7 95 aa13.38□□□□□ -0.27
DDB1-221ENST00000543162 AKT1S1Q96B36 256 aa13.38□□□□□ -0.27
DDB1-221ENST00000543162 SRP68Q9UHB9 627 aaKnown RBP13.38□□□□□ -0.27
DDB1-221ENST00000543162 SCN7AQ01118 1682 aa13.37□□□□□ -0.27
DDB1-221ENST00000543162 C4AP0C0L4 1744 aa13.37□□□□□ -0.27
DDB1-221ENST00000543162 USPL1Q5W0Q7 1092 aa13.37□□□□□ -0.27
DDB1-221ENST00000543162 UBE3BQ7Z3V4 1068 aa13.37□□□□□ -0.27
DDB1-221ENST00000543162 NLRP10Q86W26 655 aa13.37□□□□□ -0.27
DDB1-221ENST00000543162 ZNF34Q8IZ26 560 aa13.37□□□□□ -0.27
DDB1-221ENST00000543162 RWDD1Q9H446 243 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms